RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 BDP1A6H8Y1 2624 aa11.61□□□□□ -0.55
RFFL-203ENST00000413582 BAZ2AQ9UIF9 1905 aaKnown RBP11.6□□□□□ -0.55
RFFL-203ENST00000413582 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.6□□□□□ -0.55
RFFL-203ENST00000413582 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.6□□□□□ -0.55
RFFL-203ENST00000413582 MPHOSPH10O00566 681 aaKnown RBP11.6□□□□□ -0.55
RFFL-203ENST00000413582 IPO8O15397 1037 aaKnown RBP11.6□□□□□ -0.55
RFFL-203ENST00000413582 ADAMTS4O75173 837 aa11.6□□□□□ -0.55
RFFL-203ENST00000413582 FCER1AP12319 257 aa11.6□□□□□ -0.55
RFFL-203ENST00000413582 TAL1P17542 331 aaPredicted RBP11.6□□□□□ -0.55
RFFL-203ENST00000413582 ATP8B2P98198 1209 aa11.6□□□□□ -0.55
RFFL-203ENST00000413582 MAP3K12Q12852 859 aa11.6□□□□□ -0.55
RFFL-203ENST00000413582 TMEM132BQ14DG7 1078 aa11.6□□□□□ -0.55
RFFL-203ENST00000413582 TMEM179Q6ZVK1 233 aa11.6□□□□□ -0.55
RFFL-203ENST00000413582 ANKRD33Q7Z3H0 272 aa11.6□□□□□ -0.55
RFFL-203ENST00000413582 RNF180Q86T96 592 aa11.6□□□□□ -0.55
RFFL-203ENST00000413582 SPICE1Q8N0Z3 855 aa11.6□□□□□ -0.55
RFFL-203ENST00000413582 TIFAQ96CG3 184 aa11.6□□□□□ -0.55
RFFL-203ENST00000413582 CHD7Q9P2D1 2997 aa11.6□□□□□ -0.55
RFFL-203ENST00000413582 MCM3APO60318 1980 aa11.59□□□□□ -0.55
RFFL-203ENST00000413582 BCAR3O75815 825 aa11.59□□□□□ -0.55
RFFL-203ENST00000413582 PGK2P07205 417 aa11.59□□□□□ -0.55
RFFL-203ENST00000413582 FAAP100Q0VG06 881 aa11.59□□□□□ -0.55
RFFL-203ENST00000413582 SIAH1Q8IUQ4 282 aa11.59□□□□□ -0.55
RFFL-203ENST00000413582 TMEM57Q8N5G2 664 aa11.59□□□□□ -0.55
RFFL-203ENST00000413582 TOX2Q96NM4 488 aa11.59□□□□□ -0.55
RFFL-203ENST00000413582 MMP19Q99542 508 aa11.59□□□□□ -0.55
RFFL-203ENST00000413582 TINF2Q9BSI4 451 aa11.59□□□□□ -0.55
RFFL-203ENST00000413582 C1orf115Q9H7X2 142 aa11.59□□□□□ -0.55
RFFL-203ENST00000413582 VCPKMTQ9H867 229 aa11.59□□□□□ -0.55
RFFL-203ENST00000413582 TMEM39AQ9NV64 488 aa11.59□□□□□ -0.55
RFFL-203ENST00000413582 MCM9Q9NXL9 1143 aa11.59□□□□□ -0.55
RFFL-203ENST00000413582 RAPGEFL1Q9UHV5 662 aa11.59□□□□□ -0.55
RFFL-203ENST00000413582 TBX21Q9UL17 535 aa11.59□□□□□ -0.55
RFFL-203ENST00000413582 TMX2Q9Y320 296 aa11.59□□□□□ -0.55
RFFL-203ENST00000413582 SYNRGQ9UMZ2 1314 aa11.59□□□□□ -0.55
RFFL-203ENST00000413582 GBF1Q92538 1859 aa11.58□□□□□ -0.56
RFFL-203ENST00000413582 MAGEB6P1A0A0J9YX57 407 aa11.58□□□□□ -0.56
RFFL-203ENST00000413582 WDR46O15213 610 aaKnown RBP11.58□□□□□ -0.56
RFFL-203ENST00000413582 SLC25A27O95847 323 aa11.58□□□□□ -0.56
RFFL-203ENST00000413582 ZNF865P0CJ78 1059 aaPredicted RBP11.58□□□□□ -0.56
RFFL-203ENST00000413582 CYP2D6P10635 497 aa11.58□□□□□ -0.56
RFFL-203ENST00000413582 AKR1A1P14550 325 aa11.58□□□□□ -0.56
RFFL-203ENST00000413582 PDE6AP16499 860 aa11.58□□□□□ -0.56
RFFL-203ENST00000413582 ICA1Q05084 483 aa11.58□□□□□ -0.56
RFFL-203ENST00000413582 ZNF792Q3KQV3 632 aa11.58□□□□□ -0.56
RFFL-203ENST00000413582 SDR42E1Q8WUS8 393 aa11.58□□□□□ -0.56
RFFL-203ENST00000413582 FRAT1Q92837 279 aaPredicted RBP11.58□□□□□ -0.56
RFFL-203ENST00000413582 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.58□□□□□ -0.562e-7■■■□□ 18.7
RFFL-203ENST00000413582 CRNKL1Q9BZJ0 848 aaKnown RBP11.58□□□□□ -0.56
RFFL-203ENST00000413582 ADAMTS5Q9UNA0 930 aa11.58□□□□□ -0.56
RFFL-203ENST00000413582 DIS3Q9Y2L1 958 aaKnown RBP11.58□□□□□ -0.56
RFFL-203ENST00000413582 GREB1LQ9C091 1923 aaPredicted RBP11.57□□□□□ -0.56
RFFL-203ENST00000413582 AKR1B1P15121 316 aa11.57□□□□□ -0.56
RFFL-203ENST00000413582 PBX2P40425 430 aa11.57□□□□□ -0.56
RFFL-203ENST00000413582 ACLYP53396 1101 aa11.57□□□□□ -0.56
RFFL-203ENST00000413582 KCTD2Q14681 263 aa11.57□□□□□ -0.56
RFFL-203ENST00000413582 AKNAD1Q5T1N1 836 aa11.57□□□□□ -0.56
RFFL-203ENST00000413582 RASIP1Q5U651 963 aa11.57□□□□□ -0.56
RFFL-203ENST00000413582 CCSAPQ6IQ19 270 aaPredicted RBP11.57□□□□□ -0.56
RFFL-203ENST00000413582 SAMD1Q6SPF0 538 aaPredicted RBP11.57□□□□□ -0.56
RFFL-203ENST00000413582 RIOX2Q8IUF8 465 aa11.57□□□□□ -0.56
RFFL-203ENST00000413582 ATXN2LQ8WWM7 1075 aaKnown RBP11.57□□□□□ -0.56
RFFL-203ENST00000413582 DYNLL2Q96FJ2 89 aa11.57□□□□□ -0.56
RFFL-203ENST00000413582 TSEN34Q9BSV6 310 aaKnown RBP11.57□□□□□ -0.56
RFFL-203ENST00000413582 PBX4Q9BYU1 374 aa11.57□□□□□ -0.56
RFFL-203ENST00000413582 SH2D4AQ9H788 454 aa11.57□□□□□ -0.56
RFFL-203ENST00000413582 ARHGEF10LQ9HCE6 1279 aa11.57□□□□□ -0.56
RFFL-203ENST00000413582 DCP1AQ9NPI6 582 aaPredicted RBP11.57□□□□□ -0.56
RFFL-203ENST00000413582 STARD7Q9NQZ5 370 aa11.57□□□□□ -0.56
RFFL-203ENST00000413582 FBXO28Q9NVF7 368 aa11.57□□□□□ -0.56
RFFL-203ENST00000413582 THEGQ9P2T0 379 aa11.57□□□□□ -0.56
RFFL-203ENST00000413582 SWAP70Q9UH65 585 aa11.57□□□□□ -0.56
RFFL-203ENST00000413582 ZNF214Q9UL59 606 aaPredicted RBP11.57□□□□□ -0.56
RFFL-203ENST00000413582 TCRBV5S4A2TA0A5A2 114 aa11.56□□□□□ -0.56
RFFL-203ENST00000413582 MYADML2A6NDP7 307 aa11.56□□□□□ -0.56
RFFL-203ENST00000413582 DCDC2CA8MYV0 355 aa11.56□□□□□ -0.56
RFFL-203ENST00000413582 VWA5AO00534 786 aa11.56□□□□□ -0.56
RFFL-203ENST00000413582 TIMP1P01033 207 aa11.56□□□□□ -0.56
RFFL-203ENST00000413582 HNRNPUQ00839 825 aaKnown RBP eCLIP11.56□□□□□ -0.56
RFFL-203ENST00000413582 MFSD5Q6N075 450 aa11.56□□□□□ -0.56
RFFL-203ENST00000413582 C16orf59Q7L2K0 433 aa11.56□□□□□ -0.56
RFFL-203ENST00000413582 AACSQ86V21 672 aa11.56□□□□□ -0.56
RFFL-203ENST00000413582 LCORLQ8N3X6 602 aa11.56□□□□□ -0.56
RFFL-203ENST00000413582 KLHDC9Q8NEP7 349 aa11.56□□□□□ -0.56
RFFL-203ENST00000413582 REPS2Q8NFH8 660 aa11.56□□□□□ -0.56
RFFL-203ENST00000413582 ADAMTS19Q8TE59 1207 aa11.56□□□□□ -0.56
RFFL-203ENST00000413582 NUP133Q8WUM0 1156 aa11.56□□□□□ -0.56
RFFL-203ENST00000413582 ASB2Q96Q27 587 aa11.56□□□□□ -0.56
RFFL-203ENST00000413582 GAS2L1Q99501 681 aaPredicted RBP11.56□□□□□ -0.56
RFFL-203ENST00000413582 PRDM12Q9H4Q4 367 aa11.56□□□□□ -0.56
RFFL-203ENST00000413582 PPP1R9AQ9ULJ8 1098 aa11.56□□□□□ -0.56
RFFL-203ENST00000413582 CNPY2Q9Y2B0 182 aa11.56□□□□□ -0.56
RFFL-203ENST00000413582 MOXD2PA6NHM9 499 aa11.55□□□□□ -0.56
RFFL-203ENST00000413582 GRXCR1A8MXD5 290 aa11.55□□□□□ -0.56
RFFL-203ENST00000413582 SMIM22K7EJ46 135 aa11.55□□□□□ -0.56
RFFL-203ENST00000413582 CST5P28325 142 aaPredicted RBP11.55□□□□□ -0.56
RFFL-203ENST00000413582 COPB2P35606 906 aa11.55□□□□□ -0.56
RFFL-203ENST00000413582 STAT3P40763 770 aa11.55□□□□□ -0.56
RFFL-203ENST00000413582 PPIGQ13427 754 aaKnown RBP eCLIP11.55□□□□□ -0.569e-12■■■■□ 24.8
RFFL-203ENST00000413582 ADGRE1Q14246 886 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms