RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 SCUBE1Q8IWY4 988 aa6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 BEND7Q8N7W2 519 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 ZNF513Q8N8E2 541 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 WFDC12Q8WWY7 111 aa6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 NINJ1Q92982 152 aa6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 KISS1RQ969F8 398 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 MFSD3Q96ES6 412 aa6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 UBL7Q96S82 380 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 NCOA5Q9HCD5 579 aaKnown RBP6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 TPX2Q9ULW0 747 aaKnown RBP6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 PCDHB12Q9Y5F1 795 aa6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 SHOXO15266 292 aa6.7□□□□□ -1.34
HMGB3P31-201ENST00000413333 LRRN2O75325 713 aa6.7□□□□□ -1.34
HMGB3P31-201ENST00000413333 BMP3P12645 472 aa6.7□□□□□ -1.34
HMGB3P31-201ENST00000413333 GRIA2P42262 883 aa6.7□□□□□ -1.34
HMGB3P31-201ENST00000413333 NFKBIBQ15653 356 aa6.7□□□□□ -1.34
HMGB3P31-201ENST00000413333 NSMFQ6X4W1 530 aa6.7□□□□□ -1.34
HMGB3P31-201ENST00000413333 TOP6BLQ8N6T0 577 aa6.7□□□□□ -1.34
HMGB3P31-201ENST00000413333 RNF141Q8WVD5 230 aa6.7□□□□□ -1.34
HMGB3P31-201ENST00000413333 UTP4Q969X6 686 aaKnown RBP6.7□□□□□ -1.34
HMGB3P31-201ENST00000413333 VWCEQ96DN2 955 aa6.7□□□□□ -1.34
HMGB3P31-201ENST00000413333 NACC1Q96RE7 527 aa6.7□□□□□ -1.34
HMGB3P31-201ENST00000413333 NOL6Q9H6R4 1146 aaKnown RBP6.7□□□□□ -1.34
HMGB3P31-201ENST00000413333 COL17A1Q9UMD9 1497 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 PLD2O14939 933 aa6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 KCNH1O95259 989 aa6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 PABPC1P11940 636 aaKnown RBP6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 MAP4P27816 1152 aaKnown RBP6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 ZNF445P59923 1031 aa6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 NRG1Q02297 640 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 SNW1Q13573 536 aaKnown RBP6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 TM4SF20Q53R12 229 aa6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 LCE2AQ5TA79 106 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 POMZP3Q6PJE2 187 aa6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 CRACR2BQ8N4Y2 399 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 BTN2A2Q8WVV5 523 aa6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 FAM46AQ96IP4 442 aaKnown RBP6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 CLUHP3Q96NS8 147 aa6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 PSMG3-AS1Q96PY0 264 aa6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 IER2Q9BTL4 223 aa6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 ASPNQ9BXN1 380 aa6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 KCNF1Q9H3M0 494 aa6.69□□□□□ -1.34
HMGB3P31-201ENST00000413333 FAM95CA0A1B0GW59 222 aa6.68□□□□□ -1.34
HMGB3P31-201ENST00000413333 FGFR1P11362 822 aa6.68□□□□□ -1.34
HMGB3P31-201ENST00000413333 SUMO1P63165 101 aaKnown RBP6.68□□□□□ -1.34
HMGB3P31-201ENST00000413333 NBPF9Q3BBW0 867 aa6.68□□□□□ -1.34
HMGB3P31-201ENST00000413333 Q6ZS46 218 aa6.68□□□□□ -1.34
HMGB3P31-201ENST00000413333 TRIM59Q8IWR1 403 aa6.68□□□□□ -1.34
HMGB3P31-201ENST00000413333 EZH1Q92800 747 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P31-201ENST00000413333 RCC1LQ96I51 464 aaKnown RBP6.68□□□□□ -1.34
HMGB3P31-201ENST00000413333 MRGPRX3Q96LB0 322 aa6.68□□□□□ -1.34
HMGB3P31-201ENST00000413333 FBXL18Q96ME1 805 aa6.68□□□□□ -1.34
HMGB3P31-201ENST00000413333 PRDM14Q9GZV8 571 aa6.68□□□□□ -1.34
HMGB3P31-201ENST00000413333 GFOD1Q9NXC2 390 aa6.68□□□□□ -1.34
HMGB3P31-201ENST00000413333 CGGBP1Q9UFW8 167 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P31-201ENST00000413333 EMC9Q9Y3B6 208 aa6.68□□□□□ -1.34
HMGB3P31-201ENST00000413333 LEFTY1O75610 366 aa6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 RFPL3O75679 317 aa6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 CBX7O95931 251 aa6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 CYP7A1P22680 504 aa6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 KCNJ6P48051 423 aa6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 FNDC3BQ53EP0 1204 aaKnown RBP6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 CT47A1Q5JQC4 288 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 CNNM4Q6P4Q7 775 aa6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 KRT26Q7Z3Y9 468 aa6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 RPUSD2Q8IZ73 545 aaKnown RBP6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 ARMC10Q8N2F6 343 aa6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 ARHGEF39Q8N4T4 335 aa6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 FIBCD1Q8N539 461 aa6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 UBR7Q8N806 425 aa6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 CHAC2Q8WUX2 184 aa6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 OSBP2Q969R2 916 aa6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 MYRFLQ96LU7 910 aa6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 ZDHHC15Q96MV8 337 aa6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 DSCC1Q9BVC3 393 aa6.67□□□□□ -1.34
HMGB3P31-201ENST00000413333 A0A087WZG4 1122 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 MEIS1O00470 390 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 PDE8AO60658 829 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 VAMP4O75379 141 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 EOMESO95936 686 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 VIL1P09327 827 aaKnown RBP6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 COL8A1P27658 744 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 MBTPS1Q14703 1052 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 SF1Q15637 639 aaKnown RBP6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 UVSSAQ2YD98 709 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 GTF2IRD2BQ6EKJ0 949 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 PAOXQ6QHF9 649 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 SEZ6L2Q6UXD5 910 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 TMC3Q7Z5M5 1100 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 GTF2IRD2Q86UP8 949 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 THNSL2Q86YJ6 484 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 GIMAP7Q8NHV1 300 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 MEGF10Q96KG7 1140 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 DUSP23Q9BVJ7 150 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 MRPL4Q9BYD3 311 aaKnown RBP6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 C1GALT1Q9NS00 363 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 NDOR1Q9UHB4 597 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 ADAMTS8Q9UP79 889 aa6.66□□□□□ -1.34
HMGB3P31-201ENST00000413333 DIS3Q9Y2L1 958 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms