RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 NRDE2Q9H7Z3 1164 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 CARD8Q9Y2G2 431 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 TTI1O43156 1089 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 NPTXRO95502 500 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 GNAT2P19087 354 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 ERCC5P28715 1186 aaPredicted RBP5.83□□□□□ -1.48
HERC4-205ENST00000412272 MLH1P40692 756 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 NEUROD2Q15784 382 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 MAP3K11Q16584 847 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 KAZNQ674X7 775 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 ADALQ6DHV7 355 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 PDILTQ8N807 584 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 LZICQ8WZA0 190 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 ABCF3Q9NUQ8 709 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 R3HDM2Q9Y2K5 976 aaKnown RBP5.83□□□□□ -1.48
HERC4-205ENST00000412272 CD109Q6YHK3 1445 aa5.83□□□□□ -1.48
HERC4-205ENST00000412272 TARBP1Q13395 1621 aaKnown RBP5.82□□□□□ -1.48
HERC4-205ENST00000412272 A0A0B4J203 849 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 FANCGO15287 622 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 RRM1P23921 792 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 NFKBIAP25963 317 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 ALDH3A1P30838 453 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 USH1GQ495M9 461 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 CCDC152Q4G0S7 254 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 E4F1Q66K89 784 aaPredicted RBP5.82□□□□□ -1.48
HERC4-205ENST00000412272 LMOD2Q6P5Q4 547 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 FIP1L1Q6UN15 594 aaKnown RBP5.82□□□□□ -1.48
HERC4-205ENST00000412272 C11orf74Q86VG3 221 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 ERICH1Q86X53 443 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 MSANTD4Q8NCY6 345 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 TEKT4Q8WW24 435 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 DCTPP1Q9H773 170 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 DDX19AQ9NUU7 478 aaKnown RBP5.82□□□□□ -1.48
HERC4-205ENST00000412272 L3MBTL1Q9Y468 752 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 GRIN2DO15399 1336 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 ATP10DQ9P241 1426 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 B4GALT4O60513 344 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 HIP1RO75146 1068 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 TBCAO75347 108 aaKnown RBP5.82□□□□□ -1.48
HERC4-205ENST00000412272 F13A1P00488 732 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 UBL4AP11441 157 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 CNGA1P29973 690 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 PMS2P54278 862 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 SLMAPQ14BN4 828 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 FAM209AQ5JX71 171 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 LINC00469Q8N7U9 141 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 IER2Q9BTL4 223 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 GGA2Q9UJY4 613 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 ATP1B4Q9UN42 357 aaPredicted RBP5.82□□□□□ -1.48
HERC4-205ENST00000412272 SH3GLB1Q9Y371 365 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 ADAMTS12P58397 1594 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 A0A1W2PQ67 120 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 DPPA5A6NC42 116 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 SLC16A2P36021 539 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 ARHGAP25P42331 645 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 GUCY2FP51841 1108 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 ETF1P62495 437 aaKnown RBP5.82□□□□□ -1.48
HERC4-205ENST00000412272 TUBB2AQ13885 445 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 TRIM65Q6PJ69 517 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 HDXQ7Z353 690 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 PPFIBP1Q86W92 1011 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 ITPRIPQ8IWB1 547 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 TCP11L2Q8N4U5 519 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 KIAA1958Q8N8K9 716 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 SMC1BQ8NDV3 1235 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 GDAP1Q8TB36 358 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 AFAP1L1Q8TED9 768 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 LRRC45Q96CN5 670 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 STAMBPL1Q96FJ0 436 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 ASIC4Q96FT7 647 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 ABHD8Q96I13 439 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 TUBB2BQ9BVA1 445 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 CENPHQ9H3R5 247 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 L1RE1Q9UN81 338 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 FRMPD1Q5SYB0 1578 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 NPHP3Q7Z494 1330 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 SH3TC1Q8TE82 1336 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 CDHR2Q9BYE9 1310 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 MAP3K4Q9Y6R4 1608 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 SUPT3HO75486 399 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 MYCP01106 439 aaPredicted RBP5.82□□□□□ -1.48
HERC4-205ENST00000412272 TUFMP49411 452 aaKnown RBP5.82□□□□□ -1.48
HERC4-205ENST00000412272 IRAK1P51617 712 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 ARID5BQ14865 1188 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 SH2D4BQ5SQS7 431 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 PTF1AQ7RTS3 328 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 CABP7Q86V35 215 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 SIRT2Q8IXJ6 389 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 NSUN7Q8NE18 718 aaKnown RBP5.82□□□□□ -1.48
HERC4-205ENST00000412272 SUN5Q8TC36 379 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 CNKSR1Q969H4 720 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 PPP1R14BQ96C90 147 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 MPHOSPH8Q99549 860 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 CLSTN2Q9H4D0 955 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 RHBDL2Q9NX52 303 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 HOOK1Q9UJC3 728 aaKnown RBP5.82□□□□□ -1.48
HERC4-205ENST00000412272 KIAA1257Q9ULG3 409 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 CEP131Q9UPN4 1083 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 PARP3Q9Y6F1 533 aa5.82□□□□□ -1.48
HERC4-205ENST00000412272 TARSL2A2RTX5 802 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms