RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 FXR1P51114 621 aaKnown RBP eCLIP18.86■□□□□ 0.61
LIMS2-208ENST00000410011 NLRP5P59047 1200 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 CHMP4BP1P59074 171 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 SLC10A5Q5PT55 438 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 C4orf32Q8N8J7 132 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 FUT8Q9BYC5 575 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 DCP1AQ9NPI6 582 aaPredicted RBP18.86■□□□□ 0.61
LIMS2-208ENST00000410011 RAB21Q9UL25 225 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 MYH14Q7Z406 1995 aaKnown RBP18.86■□□□□ 0.61
LIMS2-208ENST00000410011 COL4A1P02462 1669 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 H7C1D1 291 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 SEC31AO94979 1220 aaKnown RBP18.86■□□□□ 0.61
LIMS2-208ENST00000410011 MYL1P05976 194 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 KIF5BP33176 963 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 USP5P45974 858 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 IL17AQ16552 155 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 TCP11X2Q5H9J9 407 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 RRAGBQ5VZM2 374 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 CYP26C1Q6V0L0 522 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 SMYD4Q8IYR2 804 aaPredicted RBP18.86■□□□□ 0.61
LIMS2-208ENST00000410011 IRX2Q9BZI1 471 aaPredicted RBP18.86■□□□□ 0.61
LIMS2-208ENST00000410011 CRNKL1Q9BZJ0 848 aaKnown RBP18.86■□□□□ 0.61
LIMS2-208ENST00000410011 LZTFL1Q9NQ48 299 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 ABHD10Q9NUJ1 306 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 ARPP21Q9UBL0 812 aaPredicted RBP18.86■□□□□ 0.61
LIMS2-208ENST00000410011 CTNND2Q9UQB3 1225 aa18.86■□□□□ 0.61
LIMS2-208ENST00000410011 BAZ2AQ9UIF9 1905 aaKnown RBP18.86■□□□□ 0.61
LIMS2-208ENST00000410011 N4BP3O15049 544 aa18.85■□□□□ 0.61
LIMS2-208ENST00000410011 TUBBP07437 444 aa18.85■□□□□ 0.61
LIMS2-208ENST00000410011 COPB1P53618 953 aaKnown RBP18.85■□□□□ 0.61
LIMS2-208ENST00000410011 NOM1Q5C9Z4 860 aaKnown RBP18.85■□□□□ 0.61
LIMS2-208ENST00000410011 MSANTD4Q8NCY6 345 aa18.85■□□□□ 0.61
LIMS2-208ENST00000410011 CPLX3Q8WVH0 158 aa18.85■□□□□ 0.61
LIMS2-208ENST00000410011 ANKS1AQ92625 1134 aa18.85■□□□□ 0.61
LIMS2-208ENST00000410011 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.85■□□□□ 0.61
LIMS2-208ENST00000410011 CTAGE9A4FU28 777 aa18.85■□□□□ 0.61
LIMS2-208ENST00000410011 MAP2K7O14733 419 aa18.85■□□□□ 0.61
LIMS2-208ENST00000410011 PIK3AP1Q6ZUJ8 805 aa18.85■□□□□ 0.61
LIMS2-208ENST00000410011 GTF2E1P29083 439 aaPredicted RBP18.84■□□□□ 0.61
LIMS2-208ENST00000410011 EPC1Q9H2F5 836 aa18.84■□□□□ 0.61
LIMS2-208ENST00000410011 COL16A1Q07092 1604 aaPredicted RBP18.84■□□□□ 0.61
LIMS2-208ENST00000410011 RPN1P04843 607 aaKnown RBP18.84■□□□□ 0.61
LIMS2-208ENST00000410011 SMC1AQ14683 1233 aaKnown RBP18.84■□□□□ 0.61
LIMS2-208ENST00000410011 KCNB1Q14721 858 aa18.84■□□□□ 0.61
LIMS2-208ENST00000410011 DDB1Q16531 1140 aa18.84■□□□□ 0.61
LIMS2-208ENST00000410011 DGKHQ86XP1 1220 aa18.84■□□□□ 0.61
LIMS2-208ENST00000410011 SMARCC1Q92922 1105 aaPredicted RBP18.84■□□□□ 0.61
LIMS2-208ENST00000410011 ADAMTS2O95450 1211 aa18.83■□□□□ 0.61
LIMS2-208ENST00000410011 MECOMQ03112 1051 aa18.83■□□□□ 0.61
LIMS2-208ENST00000410011 WHAMMP3Q1A5X7 153 aa18.83■□□□□ 0.61
LIMS2-208ENST00000410011 ERFEQ4G0M1 354 aa18.83■□□□□ 0.61
LIMS2-208ENST00000410011 ZNF569Q5MCW4 686 aa18.83■□□□□ 0.61
LIMS2-208ENST00000410011 NELFBQ8WX92 580 aa18.83■□□□□ 0.61
LIMS2-208ENST00000410011 CALCOCO1Q9P1Z2 691 aa18.83■□□□□ 0.61
LIMS2-208ENST00000410011 A0A1W2PQC6 194 aa18.83■□□□□ 0.6
LIMS2-208ENST00000410011 KCNJ18B7U540 433 aa18.83■□□□□ 0.6
LIMS2-208ENST00000410011 ERVK-24P63145 666 aa18.83■□□□□ 0.6
LIMS2-208ENST00000410011 PIP4K2BP78356 416 aa18.83■□□□□ 0.6
LIMS2-208ENST00000410011 KCNJ12Q14500 433 aa18.83■□□□□ 0.6
LIMS2-208ENST00000410011 LONRF2Q1L5Z9 754 aa18.83■□□□□ 0.6
LIMS2-208ENST00000410011 GALNT17Q6IS24 598 aa18.83■□□□□ 0.6
LIMS2-208ENST00000410011 RCSD1Q6JBY9 416 aa18.83■□□□□ 0.6
LIMS2-208ENST00000410011 BLIDQ8IZY5 108 aa18.83■□□□□ 0.6
LIMS2-208ENST00000410011 BLZF1Q9H2G9 400 aa18.83■□□□□ 0.6
LIMS2-208ENST00000410011 LAMB1P07942 1786 aa18.82■□□□□ 0.6
LIMS2-208ENST00000410011 M0R2N6 131 aa18.82■□□□□ 0.6
LIMS2-208ENST00000410011 MCM7P33993 719 aa18.82■□□□□ 0.6
LIMS2-208ENST00000410011 ANKZF1Q9H8Y5 726 aa18.82■□□□□ 0.6
LIMS2-208ENST00000410011 PCDHA4Q9UN74 947 aa18.82■□□□□ 0.6
LIMS2-208ENST00000410011 ZNF831Q5JPB2 1677 aa18.82■□□□□ 0.6
LIMS2-208ENST00000410011 SPATA31A1Q5TZJ5 1347 aa18.82■□□□□ 0.6
LIMS2-208ENST00000410011 ARHGAP25P42331 645 aa18.82■□□□□ 0.6
LIMS2-208ENST00000410011 KIF4BQ2VIQ3 1234 aa18.82■□□□□ 0.6
LIMS2-208ENST00000410011 CCDC178Q5BJE1 867 aa18.82■□□□□ 0.6
LIMS2-208ENST00000410011 WWC2Q6AWC2 1192 aa18.82■□□□□ 0.6
LIMS2-208ENST00000410011 ZNF662Q6ZS27 426 aa18.82■□□□□ 0.6
LIMS2-208ENST00000410011 ADSSL1Q8N142 457 aa18.82■□□□□ 0.6
LIMS2-208ENST00000410011 DAGLBQ8NCG7 672 aa18.82■□□□□ 0.6
LIMS2-208ENST00000410011 NAPGQ99747 312 aaPredicted RBP18.82■□□□□ 0.6
LIMS2-208ENST00000410011 LAD1O00515 517 aa18.81■□□□□ 0.6
LIMS2-208ENST00000410011 CCT6AP40227 531 aaKnown RBP18.81■□□□□ 0.6
LIMS2-208ENST00000410011 GNAQP50148 359 aa18.81■□□□□ 0.6
LIMS2-208ENST00000410011 C3orf67Q6ZVT6 689 aa18.81■□□□□ 0.6
LIMS2-208ENST00000410011 STAMQ92783 540 aa18.81■□□□□ 0.6
LIMS2-208ENST00000410011 DISC1Q9NRI5 854 aa18.81■□□□□ 0.6
LIMS2-208ENST00000410011 WTIPA6NIX2 430 aaPredicted RBP18.8■□□□□ 0.6
LIMS2-208ENST00000410011 EEF1GP26641 437 aaKnown RBP18.8■□□□□ 0.6
LIMS2-208ENST00000410011 PRCPP42785 496 aa18.8■□□□□ 0.6
LIMS2-208ENST00000410011 SLC35F6Q8N357 371 aa18.8■□□□□ 0.6
LIMS2-208ENST00000410011 NUP88Q99567 741 aaPredicted RBP18.8■□□□□ 0.6
LIMS2-208ENST00000410011 CCSER1Q9C0I3 900 aa18.8■□□□□ 0.6
LIMS2-208ENST00000410011 ANKRD2Q9GZV1 360 aa18.8■□□□□ 0.6
LIMS2-208ENST00000410011 VPS16Q9H269 839 aa18.8■□□□□ 0.6
LIMS2-208ENST00000410011 A0A0U1RQJ8 604 aa18.8■□□□□ 0.6
LIMS2-208ENST00000410011 NMT2O60551 498 aa18.8■□□□□ 0.6
LIMS2-208ENST00000410011 ERLIN1O75477 346 aa18.8■□□□□ 0.6
LIMS2-208ENST00000410011 OAS2P29728 719 aaKnown RBP18.8■□□□□ 0.6
LIMS2-208ENST00000410011 KRT9P35527 623 aa18.8■□□□□ 0.6
LIMS2-208ENST00000410011 BEND6Q5SZJ8 279 aaPredicted RBP18.8■□□□□ 0.6
LIMS2-208ENST00000410011 IRF2BP1Q8IU81 584 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms