RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 FOXD4L5Q5VV16 416 aaPredicted RBP14.63□□□□□ -0.07
PMS1-204ENST00000409823 TMTC3Q6ZXV5 915 aa14.63□□□□□ -0.07
PMS1-204ENST00000409823 C2orf69Q8N8R5 385 aa14.63□□□□□ -0.07
PMS1-204ENST00000409823 FOXD4L4Q8WXT5 416 aaPredicted RBP14.63□□□□□ -0.07
PMS1-204ENST00000409823 INTS4Q96HW7 963 aaKnown RBP14.63□□□□□ -0.07
PMS1-204ENST00000409823 GOPCQ9HD26 462 aa14.63□□□□□ -0.07
PMS1-204ENST00000409823 ATAD5Q96QE3 1844 aa14.63□□□□□ -0.07
PMS1-204ENST00000409823 CCDC196A0A1B0GTZ2 297 aa14.63□□□□□ -0.07
PMS1-204ENST00000409823 PALM3A6NDB9 673 aaPredicted RBP14.63□□□□□ -0.07
PMS1-204ENST00000409823 CYTH3O43739 400 aa14.63□□□□□ -0.07
PMS1-204ENST00000409823 FDPSP14324 419 aaKnown RBP14.63□□□□□ -0.07
PMS1-204ENST00000409823 NOL9Q5SY16 702 aaKnown RBP14.63□□□□□ -0.07
PMS1-204ENST00000409823 HOMER1Q86YM7 354 aa14.63□□□□□ -0.07
PMS1-204ENST00000409823 OPTNQ96CV9 577 aa14.63□□□□□ -0.07
PMS1-204ENST00000409823 VCPKMTQ9H867 229 aa14.63□□□□□ -0.07
PMS1-204ENST00000409823 V9GY48 417 aaPredicted RBP14.63□□□□□ -0.07
PMS1-204ENST00000409823 SNHG28P0DPA3 235 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 BACE1P56817 501 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 SNAP25P60880 206 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 ZNF543Q08ER8 600 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 MAP3K11Q16584 847 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 GMCL1P1Q8NEA9 526 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 EMILIN3Q9NT22 766 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 RBM28Q9NW13 759 aaKnown RBP14.62□□□□□ -0.07
PMS1-204ENST00000409823 ORC3Q9UBD5 711 aaPredicted RBP14.62□□□□□ -0.07
PMS1-204ENST00000409823 AFG3L2Q9Y4W6 797 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 TMEM232C9JQI7 657 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 LDLRAD1Q5T700 205 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 CPLX2Q6PUV4 134 aaKnown RBP14.62□□□□□ -0.07
PMS1-204ENST00000409823 FAM184AQ8NB25 1140 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 SLC10A4Q96EP9 437 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 AS3MTQ9HBK9 375 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 CENPFP49454 3210 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 BMP3P12645 472 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 RCAN1P53805 252 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 HUNKP57058 714 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 FUT2Q10981 343 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 SH2D4AQ9H788 454 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 FBXO28Q9NVF7 368 aa14.62□□□□□ -0.07
PMS1-204ENST00000409823 OTOFQ9HC10 1997 aa14.61□□□□□ -0.07
PMS1-204ENST00000409823 TOMM70O94826 608 aa14.61□□□□□ -0.07
PMS1-204ENST00000409823 IFNAR1P17181 557 aa14.61□□□□□ -0.07
PMS1-204ENST00000409823 GUCY1B3Q02153 619 aa14.61□□□□□ -0.07
PMS1-204ENST00000409823 SSRP1Q08945 709 aaKnown RBP14.61□□□□□ -0.07
PMS1-204ENST00000409823 OTUD7BQ6GQQ9 843 aa14.61□□□□□ -0.07
PMS1-204ENST00000409823 SMC1BQ8NDV3 1235 aa14.61□□□□□ -0.07
PMS1-204ENST00000409823 SMARCC2Q8TAQ2 1214 aa14.61□□□□□ -0.07
PMS1-204ENST00000409823 KIAA1683Q9H0B3 1180 aa14.61□□□□□ -0.07
PMS1-204ENST00000409823 DOCK1Q14185 1865 aa14.61□□□□□ -0.07
PMS1-204ENST00000409823 VCAM1P19320 739 aa14.61□□□□□ -0.07
PMS1-204ENST00000409823 ERO1BQ86YB8 467 aa14.61□□□□□ -0.07
PMS1-204ENST00000409823 LLPHQ9BRT6 129 aaKnown RBP14.61□□□□□ -0.07
PMS1-204ENST00000409823 WDR18Q9BV38 432 aa14.61□□□□□ -0.07
PMS1-204ENST00000409823 GINM1Q9NU53 330 aa14.61□□□□□ -0.07
PMS1-204ENST00000409823 CDKL5O76039 1030 aa14.6□□□□□ -0.07
PMS1-204ENST00000409823 GJA5P36382 358 aa14.6□□□□□ -0.07
PMS1-204ENST00000409823 ASPRV1Q53RT3 343 aa14.6□□□□□ -0.07
PMS1-204ENST00000409823 GMCL1Q96IK5 515 aa14.6□□□□□ -0.07
PMS1-204ENST00000409823 TANGO6Q9C0B7 1094 aa14.6□□□□□ -0.07
PMS1-204ENST00000409823 NID2Q14112 1375 aa14.6□□□□□ -0.07
PMS1-204ENST00000409823 CNTNAP5Q8WYK1 1306 aa14.6□□□□□ -0.07
PMS1-204ENST00000409823 TRIM22Q8IYM9 498 aa14.6□□□□□ -0.07
PMS1-204ENST00000409823 ADGRF4Q8IZF3 695 aa14.6□□□□□ -0.07
PMS1-204ENST00000409823 DCAF4Q8WV16 495 aa14.6□□□□□ -0.07
PMS1-204ENST00000409823 MAP3K14Q99558 947 aa14.6□□□□□ -0.07
PMS1-204ENST00000409823 PASKQ96RG2 1323 aa14.59□□□□□ -0.07
PMS1-204ENST00000409823 SPDYE5A6NIY4 337 aa14.59□□□□□ -0.07
PMS1-204ENST00000409823 FMNL1O95466 1100 aaPredicted RBP14.59□□□□□ -0.07
PMS1-204ENST00000409823 AKAP17AQ02040 695 aaKnown RBP14.59□□□□□ -0.07
PMS1-204ENST00000409823 PPP2R5BQ15173 497 aa14.59□□□□□ -0.07
PMS1-204ENST00000409823 LARP1BQ659C4 914 aaKnown RBP14.59□□□□□ -0.07
PMS1-204ENST00000409823 KIFC2Q96AC6 838 aa14.59□□□□□ -0.07
PMS1-204ENST00000409823 PIGSQ96S52 555 aa14.59□□□□□ -0.07
PMS1-204ENST00000409823 SYT1P21579 422 aa14.59□□□□□ -0.07
PMS1-204ENST00000409823 PPATQ06203 517 aa14.59□□□□□ -0.07
PMS1-204ENST00000409823 GRM1Q13255 1194 aa14.59□□□□□ -0.07
PMS1-204ENST00000409823 GPATCH4Q5T3I0 446 aaKnown RBP14.59□□□□□ -0.07
PMS1-204ENST00000409823 GPKOWQ92917 476 aaPredicted RBP eCLIP14.59□□□□□ -0.07
PMS1-204ENST00000409823 RPAP3Q9H6T3 665 aaPredicted RBP14.59□□□□□ -0.07
PMS1-204ENST00000409823 VPS37CA5D8V6 355 aaPredicted RBP14.58□□□□□ -0.07
PMS1-204ENST00000409823 TAL1P17542 331 aaPredicted RBP14.58□□□□□ -0.07
PMS1-204ENST00000409823 TREML2Q5T2D2 321 aa14.58□□□□□ -0.07
PMS1-204ENST00000409823 GADL1Q6ZQY3 521 aa14.58□□□□□ -0.07
PMS1-204ENST00000409823 ALG1Q9BT22 464 aa14.58□□□□□ -0.07
PMS1-204ENST00000409823 GNAQP50148 359 aa14.58□□□□□ -0.08
PMS1-204ENST00000409823 STAT2P52630 851 aa14.58□□□□□ -0.08
PMS1-204ENST00000409823 USP14P54578 494 aa14.58□□□□□ -0.08
PMS1-204ENST00000409823 FKBP1BP68106 108 aa14.58□□□□□ -0.08
PMS1-204ENST00000409823 HMGN5P82970 282 aaKnown RBP14.58□□□□□ -0.08
PMS1-204ENST00000409823 PKN1Q16512 942 aa14.58□□□□□ -0.08
PMS1-204ENST00000409823 FOXD4L6Q3SYB3 417 aaPredicted RBP14.58□□□□□ -0.08
PMS1-204ENST00000409823 FOXD4L3Q6VB84 417 aaPredicted RBP14.58□□□□□ -0.08
PMS1-204ENST00000409823 SAPCD2Q86UD0 394 aa14.58□□□□□ -0.08
PMS1-204ENST00000409823 JMJD4Q9H9V9 463 aa14.58□□□□□ -0.08
PMS1-204ENST00000409823 ABT1Q9ULW3 272 aaKnown RBP14.58□□□□□ -0.08
PMS1-204ENST00000409823 DDIT3P35638 169 aa14.57□□□□□ -0.08
PMS1-204ENST00000409823 CWC22Q9HCG8 908 aaKnown RBP14.57□□□□□ -0.08
PMS1-204ENST00000409823 TMOD4Q9NZQ9 345 aa14.57□□□□□ -0.08
PMS1-204ENST00000409823 VPS54Q9P1Q0 977 aa14.57□□□□□ -0.08
PMS1-204ENST00000409823 FLOT1O75955 427 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms