RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 FAM160B1Q5W0V3 765 aa27.76■■■□□ 2.03
SPIRE1-202ENST00000409402 ZNF710Q8N1W2 664 aa27.76■■■□□ 2.03
SPIRE1-202ENST00000409402 STAMQ92783 540 aa27.76■■■□□ 2.03
SPIRE1-202ENST00000409402 PRDM10Q9NQV6 1147 aa27.76■■■□□ 2.03
SPIRE1-202ENST00000409402 NRBP2Q9NSY0 501 aa27.76■■■□□ 2.03
SPIRE1-202ENST00000409402 SORBS3O60504 671 aa27.75■■■□□ 2.03
SPIRE1-202ENST00000409402 CCDC6Q16204 474 aa27.75■■■□□ 2.03
SPIRE1-202ENST00000409402 HS1BP3Q53T59 392 aa27.75■■■□□ 2.03
SPIRE1-202ENST00000409402 CCDC93Q567U6 631 aa27.75■■■□□ 2.03
SPIRE1-202ENST00000409402 SEPT12Q8IYM1 358 aa27.75■■■□□ 2.03
SPIRE1-202ENST00000409402 SECISBP2LQ93073 1101 aaKnown RBP27.75■■■□□ 2.03
SPIRE1-202ENST00000409402 NUCKS1Q9H1E3 243 aaKnown RBP27.75■■■□□ 2.03
SPIRE1-202ENST00000409402 SERTAD1Q9UHV2 236 aa27.75■■■□□ 2.03
SPIRE1-202ENST00000409402 RDH13Q8NBN7 331 aa27.75■■■□□ 2.03
SPIRE1-202ENST00000409402 TRIM7Q9C029 511 aa27.75■■■□□ 2.03
SPIRE1-202ENST00000409402 SAMD9LQ8IVG5 1584 aa27.75■■■□□ 2.03
SPIRE1-202ENST00000409402 FOSP01100 380 aaPredicted RBP27.75■■■□□ 2.03
SPIRE1-202ENST00000409402 OR52Z1P0C646 297 aa27.75■■■□□ 2.03
SPIRE1-202ENST00000409402 TMOD1P28289 359 aa27.75■■■□□ 2.03
SPIRE1-202ENST00000409402 PTH1RQ03431 593 aa27.75■■■□□ 2.03
SPIRE1-202ENST00000409402 GOLGA5Q8TBA6 731 aa27.75■■■□□ 2.03
SPIRE1-202ENST00000409402 PSMC4P43686 418 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 UTP14CQ5TAP6 766 aaKnown RBP27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 IPO4Q8TEX9 1081 aaKnown RBP27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 STIM2Q9P246 746 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 ERCC3P19447 782 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 ATP5DP30049 168 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 CCT6BQ92526 530 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 DBNDD1Q9H9R9 158 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 CD2APQ9Y5K6 639 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 ERBB3P21860 1342 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 ERVV-1B6SEH8 477 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 ATF7P17544 494 aaPredicted RBP27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 ADORA1P30542 326 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 KMT5BQ4FZB7 885 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 CC2D2BQ6DHV5 1058 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 DPP9Q86TI2 863 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 SH3BP5O60239 455 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 POLA2Q14181 598 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 TMTC1Q8IUR5 882 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 IQCDQ96DY2 449 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 V9GYY5 206 aaPredicted RBP27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 PFKFB2O60825 505 aa27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 GPKOWQ92917 476 aaPredicted RBP eCLIP27.74■■■□□ 2.03
SPIRE1-202ENST00000409402 GABPAQ06546 454 aa27.73■■■□□ 2.03
SPIRE1-202ENST00000409402 MYOCDQ8IZQ8 938 aa27.73■■■□□ 2.03
SPIRE1-202ENST00000409402 NBPF3Q9H094 633 aa27.73■■■□□ 2.03
SPIRE1-202ENST00000409402 TNNC2P02585 160 aa27.73■■■□□ 2.03
SPIRE1-202ENST00000409402 PCDHA1Q9Y5I3 950 aa27.73■■■□□ 2.03
SPIRE1-202ENST00000409402 CYP2J2P51589 502 aa27.73■■■□□ 2.03
SPIRE1-202ENST00000409402 SYCE1Q8N0S2 351 aa27.73■■■□□ 2.03
SPIRE1-202ENST00000409402 FAM193BQ96PV7 902 aaPredicted RBP27.73■■■□□ 2.03
SPIRE1-202ENST00000409402 UTP11Q9Y3A2 253 aaKnown RBP27.73■■■□□ 2.03
SPIRE1-202ENST00000409402 CRCPO75575 148 aa27.73■■■□□ 2.03
SPIRE1-202ENST00000409402 ARMC9Q7Z3E5 817 aa27.72■■■□□ 2.03
SPIRE1-202ENST00000409402 ARHGAP44Q17R89 818 aa27.72■■■□□ 2.03
SPIRE1-202ENST00000409402 GPATCH4Q5T3I0 446 aaKnown RBP27.72■■■□□ 2.03
SPIRE1-202ENST00000409402 RNF123Q5XPI4 1314 aa27.72■■■□□ 2.03
SPIRE1-202ENST00000409402 ZNF335Q9H4Z2 1342 aaPredicted RBP27.72■■■□□ 2.03
SPIRE1-202ENST00000409402 K7ENM7 598 aa27.72■■■□□ 2.03
SPIRE1-202ENST00000409402 ZBTB24O43167 697 aaPredicted RBP27.72■■■□□ 2.03
SPIRE1-202ENST00000409402 MAGEA1P43355 309 aa27.72■■■□□ 2.03
SPIRE1-202ENST00000409402 TUBB2AQ13885 445 aa27.72■■■□□ 2.03
SPIRE1-202ENST00000409402 TUBB2BQ9BVA1 445 aa27.72■■■□□ 2.03
SPIRE1-202ENST00000409402 AMNQ9BXJ7 453 aa27.72■■■□□ 2.03
SPIRE1-202ENST00000409402 SUGCTQ9HAC7 445 aa27.72■■■□□ 2.03
SPIRE1-202ENST00000409402 CLUL1Q15846 466 aa27.72■■■□□ 2.03
SPIRE1-202ENST00000409402 DALRD3Q5D0E6 543 aaKnown RBP27.72■■■□□ 2.03
SPIRE1-202ENST00000409402 MED10Q9BTT4 135 aa27.72■■■□□ 2.03
SPIRE1-202ENST00000409402 GCC2Q8IWJ2 1684 aa27.71■■■□□ 2.03
SPIRE1-202ENST00000409402 NKIRAS1Q9NYS0 192 aa27.71■■■□□ 2.03
SPIRE1-202ENST00000409402 ABCA8O94911 1581 aa27.71■■■□□ 2.03
SPIRE1-202ENST00000409402 XRCC5P13010 732 aaKnown RBP27.71■■■□□ 2.03
SPIRE1-202ENST00000409402 ZMYND15Q9H091 742 aa27.71■■■□□ 2.03
SPIRE1-202ENST00000409402 ERVK-7P63135 1459 aa27.71■■■□□ 2.03
SPIRE1-202ENST00000409402 MBD5Q9P267 1494 aa27.71■■■□□ 2.03
SPIRE1-202ENST00000409402 ASPRV1Q53RT3 343 aa27.71■■■□□ 2.03
SPIRE1-202ENST00000409402 C8orf74Q6P047 294 aa27.71■■■□□ 2.03
SPIRE1-202ENST00000409402 SMC1BQ8NDV3 1235 aa27.71■■■□□ 2.03
SPIRE1-202ENST00000409402 SEC31BQ9NQW1 1179 aa27.71■■■□□ 2.03
SPIRE1-202ENST00000409402 PLEKHF1Q96S99 279 aa27.71■■■□□ 2.03
SPIRE1-202ENST00000409402 CBX8Q9HC52 389 aa27.71■■■□□ 2.03
SPIRE1-202ENST00000409402 CLASP1Q7Z460 1538 aa27.7■■■□□ 2.02
SPIRE1-202ENST00000409402 ADCY9O60503 1353 aa27.7■■■□□ 2.02
SPIRE1-202ENST00000409402 GEN1Q17RS7 908 aa27.7■■■□□ 2.02
SPIRE1-202ENST00000409402 ADD1P35611 737 aaKnown RBP27.7■■■□□ 2.02
SPIRE1-202ENST00000409402 POLGP54098 1239 aaPredicted RBP27.7■■■□□ 2.02
SPIRE1-202ENST00000409402 LRMPQ12912 555 aa27.7■■■□□ 2.02
SPIRE1-202ENST00000409402 ADALQ6DHV7 355 aa27.7■■■□□ 2.02
SPIRE1-202ENST00000409402 DDX23Q9BUQ8 820 aaKnown RBP27.7■■■□□ 2.02
SPIRE1-202ENST00000409402 ANO3Q9BYT9 981 aa27.7■■■□□ 2.02
SPIRE1-202ENST00000409402 TSPOAP1O95153 1857 aa27.7■■■□□ 2.02
SPIRE1-202ENST00000409402 TTLL1O95922 423 aa27.7■■■□□ 2.02
SPIRE1-202ENST00000409402 PNOCQ13519 176 aa27.7■■■□□ 2.02
SPIRE1-202ENST00000409402 IMPACTQ9P2X3 320 aa27.7■■■□□ 2.02
SPIRE1-202ENST00000409402 DMP1Q13316 513 aaPredicted RBP27.69■■■□□ 2.02
SPIRE1-202ENST00000409402 PANK4Q9NVE7 773 aa27.69■■■□□ 2.02
SPIRE1-202ENST00000409402 KCNQ4P56696 695 aa27.69■■■□□ 2.02
SPIRE1-202ENST00000409402 TICAM2Q86XR7 235 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms