RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 ZNF384Q8TF68 577 aa9.41□□□□□ -0.9
LSM5-202ENST00000409292 USP6NLQ92738 828 aa9.41□□□□□ -0.9
LSM5-202ENST00000409292 CDCA7LQ96GN5 454 aa9.41□□□□□ -0.9
LSM5-202ENST00000409292 KIAA1683Q9H0B3 1180 aa9.41□□□□□ -0.9
LSM5-202ENST00000409292 EHD4Q9H223 541 aa9.41□□□□□ -0.9
LSM5-202ENST00000409292 SH2D4AQ9H788 454 aa9.41□□□□□ -0.9
LSM5-202ENST00000409292 PRDM5Q9NQX1 630 aaPredicted RBP9.41□□□□□ -0.9
LSM5-202ENST00000409292 ATP11BQ9Y2G3 1177 aa9.41□□□□□ -0.9
LSM5-202ENST00000409292 FPGT-TNNI3KV9GXZ4 949 aa9.41□□□□□ -0.9
LSM5-202ENST00000409292 HOXC6P09630 235 aa9.4□□□□□ -0.9
LSM5-202ENST00000409292 RRP1BQ14684 758 aaKnown RBP9.4□□□□□ -0.9
LSM5-202ENST00000409292 CATSPERGQ6ZRH7 1159 aa9.4□□□□□ -0.9
LSM5-202ENST00000409292 NYAP1Q6ZVC0 841 aa9.4□□□□□ -0.9
LSM5-202ENST00000409292 AMOTL1Q8IY63 956 aa9.4□□□□□ -0.9
LSM5-202ENST00000409292 MB21D1Q8N884 522 aa9.4□□□□□ -0.9
LSM5-202ENST00000409292 SYMPKQ92797 1274 aaKnown RBP9.4□□□□□ -0.9
LSM5-202ENST00000409292 CUL9Q8IWT3 2517 aa9.4□□□□□ -0.91
LSM5-202ENST00000409292 ALPK3Q96L96 1907 aa9.39□□□□□ -0.91
LSM5-202ENST00000409292 MPHOSPH10O00566 681 aaKnown RBP9.39□□□□□ -0.91
LSM5-202ENST00000409292 CYP2E1P05181 493 aaPredicted RBP9.39□□□□□ -0.91
LSM5-202ENST00000409292 VCAM1P19320 739 aa9.39□□□□□ -0.91
LSM5-202ENST00000409292 ZAP70P43403 619 aa9.39□□□□□ -0.91
LSM5-202ENST00000409292 RTP1P59025 263 aa9.39□□□□□ -0.91
LSM5-202ENST00000409292 COG2Q14746 738 aa9.39□□□□□ -0.91
LSM5-202ENST00000409292 TTF1Q15361 905 aaPredicted RBP9.39□□□□□ -0.91
LSM5-202ENST00000409292 TATDN1Q6P1N9 297 aa9.39□□□□□ -0.91
LSM5-202ENST00000409292 LBX2Q6XYB7 198 aa9.39□□□□□ -0.91
LSM5-202ENST00000409292 ERC1Q8IUD2 1116 aa9.39□□□□□ -0.91
LSM5-202ENST00000409292 FTSJ3Q8IY81 847 aaKnown RBP9.39□□□□□ -0.91
LSM5-202ENST00000409292 TRMT2AQ8IZ69 625 aaKnown RBP9.39□□□□□ -0.91
LSM5-202ENST00000409292 DDRGK1Q96HY6 314 aa9.39□□□□□ -0.91
LSM5-202ENST00000409292 DBNDD2Q9BQY9 259 aa9.39□□□□□ -0.91
LSM5-202ENST00000409292 CRNKL1Q9BZJ0 848 aaKnown RBP9.39□□□□□ -0.91
LSM5-202ENST00000409292 TANGO6Q9C0B7 1094 aa9.39□□□□□ -0.91
LSM5-202ENST00000409292 MROH8Q9H579 483 aa9.39□□□□□ -0.91
LSM5-202ENST00000409292 RPAP3Q9H6T3 665 aaPredicted RBP9.39□□□□□ -0.91
LSM5-202ENST00000409292 SEPT9Q9UHD8 586 aaPredicted RBP9.39□□□□□ -0.91
LSM5-202ENST00000409292 NDUFB9Q9Y6M9 179 aa9.39□□□□□ -0.91
LSM5-202ENST00000409292 PNMA6EA0A0J9YXQ4 647 aa9.38□□□□□ -0.91
LSM5-202ENST00000409292 CYP2C19P33261 490 aa9.38□□□□□ -0.91
LSM5-202ENST00000409292 PRSS12P56730 875 aa9.38□□□□□ -0.91
LSM5-202ENST00000409292 GRB14Q14449 540 aa9.38□□□□□ -0.91
LSM5-202ENST00000409292 PLS1Q14651 629 aa9.38□□□□□ -0.91
LSM5-202ENST00000409292 HSP90AB4PQ58FF6 505 aa9.38□□□□□ -0.91
LSM5-202ENST00000409292 ZKSCAN2Q63HK3 967 aa9.38□□□□□ -0.91
LSM5-202ENST00000409292 OLFML2BQ68BL8 750 aa9.38□□□□□ -0.91
LSM5-202ENST00000409292 CCDC174Q6PII3 467 aa9.38□□□□□ -0.91
LSM5-202ENST00000409292 RNF180Q86T96 592 aa9.38□□□□□ -0.91
LSM5-202ENST00000409292 MAGEB6Q8N7X4 407 aa9.38□□□□□ -0.91
LSM5-202ENST00000409292 MIGA1Q8NAN2 632 aa9.38□□□□□ -0.91
LSM5-202ENST00000409292 SHCBP1Q8NEM2 672 aa9.38□□□□□ -0.91
LSM5-202ENST00000409292 FAM161BQ96MY7 647 aa9.38□□□□□ -0.91
LSM5-202ENST00000409292 DNAJC18Q9H819 358 aa9.38□□□□□ -0.91
LSM5-202ENST00000409292 ARHGEF10LQ9HCE6 1279 aa9.38□□□□□ -0.91
LSM5-202ENST00000409292 MAST2Q6P0Q8 1798 aa9.37□□□□□ -0.91
LSM5-202ENST00000409292 MAGEB6P1A0A0J9YX57 407 aa9.37□□□□□ -0.91
LSM5-202ENST00000409292 SEPT4O43236 478 aa9.37□□□□□ -0.91
LSM5-202ENST00000409292 PEX10O60683 326 aa9.37□□□□□ -0.91
LSM5-202ENST00000409292 FCER1AP12319 257 aa9.37□□□□□ -0.91
LSM5-202ENST00000409292 TRIM27P14373 513 aa9.37□□□□□ -0.91
LSM5-202ENST00000409292 ADORA2AP29274 412 aa9.37□□□□□ -0.91
LSM5-202ENST00000409292 COPB2P35606 906 aa9.37□□□□□ -0.91
LSM5-202ENST00000409292 DYNLL1P63167 89 aaKnown RBP9.37□□□□□ -0.91
LSM5-202ENST00000409292 SMAD3P84022 425 aaKnown RBP9.37□□□□□ -0.91
LSM5-202ENST00000409292 ATP8B2P98198 1209 aa9.37□□□□□ -0.91
LSM5-202ENST00000409292 GJC2Q5T442 439 aaPredicted RBP9.37□□□□□ -0.91
LSM5-202ENST00000409292 SLC39A5Q6ZMH5 540 aa9.37□□□□□ -0.91
LSM5-202ENST00000409292 NCAPG2Q86XI2 1143 aa9.37□□□□□ -0.91
LSM5-202ENST00000409292 MAFAQ8NHW3 353 aaPredicted RBP9.37□□□□□ -0.91
LSM5-202ENST00000409292 CLUAP1Q96AJ1 413 aa9.37□□□□□ -0.91
LSM5-202ENST00000409292 COL25A1Q9BXS0 654 aaPredicted RBP9.37□□□□□ -0.91
LSM5-202ENST00000409292 MCM9Q9NXL9 1143 aa9.37□□□□□ -0.91
LSM5-202ENST00000409292 SWAP70Q9UH65 585 aa9.37□□□□□ -0.91
LSM5-202ENST00000409292 TACC3Q9Y6A5 838 aa9.37□□□□□ -0.91
LSM5-202ENST00000409292 TMEM265A0A087WTH1 108 aa9.36□□□□□ -0.91
LSM5-202ENST00000409292 FLOT1O75955 427 aa9.36□□□□□ -0.91
LSM5-202ENST00000409292 SLC25A27O95847 323 aa9.36□□□□□ -0.91
LSM5-202ENST00000409292 RARBP10826 455 aa9.36□□□□□ -0.91
LSM5-202ENST00000409292 FOSL2P15408 326 aa9.36□□□□□ -0.91
LSM5-202ENST00000409292 JAG1P78504 1218 aa9.36□□□□□ -0.91
LSM5-202ENST00000409292 KCTD2Q14681 263 aa9.36□□□□□ -0.91
LSM5-202ENST00000409292 TMEM179Q6ZVK1 233 aa9.36□□□□□ -0.91
LSM5-202ENST00000409292 ADGRA1Q86SQ6 560 aa9.36□□□□□ -0.91
LSM5-202ENST00000409292 ABRAQ8N0Z2 381 aa9.36□□□□□ -0.91
LSM5-202ENST00000409292 SSH3Q8TE77 659 aa9.36□□□□□ -0.91
LSM5-202ENST00000409292 SPATC1LQ9H0A9 340 aa9.36□□□□□ -0.91
LSM5-202ENST00000409292 PIH1D3Q9NQM4 214 aaKnown RBP9.36□□□□□ -0.91
LSM5-202ENST00000409292 NRBP1Q9UHY1 535 aa9.36□□□□□ -0.91
LSM5-202ENST00000409292 PLXNB2O15031 1838 aa9.35□□□□□ -0.91
LSM5-202ENST00000409292 CNMDO75829 334 aa9.35□□□□□ -0.91
LSM5-202ENST00000409292 CYBAP13498 195 aa9.35□□□□□ -0.91
LSM5-202ENST00000409292 RAG1P15918 1043 aa9.35□□□□□ -0.91
LSM5-202ENST00000409292 ERCC3P19447 782 aa9.35□□□□□ -0.91
LSM5-202ENST00000409292 ADCYAP1R1P41586 468 aa9.35□□□□□ -0.91
LSM5-202ENST00000409292 SHHQ15465 462 aa9.35□□□□□ -0.91
LSM5-202ENST00000409292 TRIM60Q495X7 471 aa9.35□□□□□ -0.91
LSM5-202ENST00000409292 ITPRIPQ8IWB1 547 aa9.35□□□□□ -0.91
LSM5-202ENST00000409292 NPLOC4Q8TAT6 608 aa9.35□□□□□ -0.91
LSM5-202ENST00000409292 ACER1Q8TDN7 264 aa9.35□□□□□ -0.91
LSM5-202ENST00000409292 RNPC3Q96LT9 517 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms