RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 PRPF4BQ13523 1007 aaKnown RBP9.36□□□□□ -0.91
SNX13-201ENST00000409076 SYCP1Q15431 976 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 KLHL7Q8IXQ5 586 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 TXLNBQ8N3L3 684 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 ENAHQ8N8S7 591 aaPredicted RBP9.36□□□□□ -0.91
SNX13-201ENST00000409076 AGPAT5Q9NUQ2 364 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 MRFAP1Q9Y605 127 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 XRN1Q8IZH2 1706 aaKnown RBP9.36□□□□□ -0.91
SNX13-201ENST00000409076 SALL1Q9NSC2 1324 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 PXDNLA1KZ92 1463 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 IKBKBO14920 756 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 PCCAP05165 728 aaPredicted RBP9.36□□□□□ -0.91
SNX13-201ENST00000409076 UQCRFS1P1P0C7P4 283 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 TNNI2P48788 182 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 NAPAP54920 295 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 APBA1Q02410 837 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 PLS1Q14651 629 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 ATL3Q6DD88 541 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 GPR161Q8N6U8 529 aaKnown RBP9.36□□□□□ -0.91
SNX13-201ENST00000409076 IQUBQ8NA54 791 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 JAKMIP2Q96AA8 810 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 MAP3K14Q99558 947 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 GPCPD1Q9NPB8 672 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.36□□□□□ -0.91
SNX13-201ENST00000409076 RIPOR2Q9Y4F9 1068 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 UTYO14607 1347 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 ANKARQ7Z5J8 1434 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 NRXN3Q9Y4C0 1643 aa9.36□□□□□ -0.91
SNX13-201ENST00000409076 MON2Q7Z3U7 1717 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 FCER1AP12319 257 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 PRCPP42785 496 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 NOP2P46087 812 aaKnown RBP9.35□□□□□ -0.91
SNX13-201ENST00000409076 CCT5P48643 541 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 SPA17Q15506 151 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 GIGYF2Q6Y7W6 1299 aaKnown RBP9.35□□□□□ -0.91
SNX13-201ENST00000409076 MAATS1Q7Z4T9 603 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 SRGAP1Q7Z6B7 1085 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 NOC4LQ9BVI4 516 aaKnown RBP9.35□□□□□ -0.91
SNX13-201ENST00000409076 BMP2KQ9NSY1 1161 aaPredicted RBP9.35□□□□□ -0.91
SNX13-201ENST00000409076 MYO6Q9UM54 1294 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 TTC26A0AVF1 554 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 RIMBP2O15034 1052 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 STX10O60499 249 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 MOCS3O95396 460 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 GYPCP04921 128 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 TSPY3P0CV98 308 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 TSPY8P0CW00 308 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 PTPREP23469 700 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 ERVK-24P63145 666 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 CASP8Q14790 479 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 NAA35Q5VZE5 725 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 HDXQ7Z353 690 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 TGFBRAP1Q8WUH2 860 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 ZSCAN10Q96SZ4 725 aaPredicted RBP9.35□□□□□ -0.91
SNX13-201ENST00000409076 MMS19Q96T76 1030 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 CCDC113Q9H0I3 377 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 RNF41Q9H4P4 317 aaPredicted RBP9.35□□□□□ -0.91
SNX13-201ENST00000409076 ATG3Q9NT62 314 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 FAM208AQ9UK61 1670 aaKnown RBP9.35□□□□□ -0.91
SNX13-201ENST00000409076 PHLPP2Q6ZVD8 1323 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 MYO1CO00159 1063 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 PPP6R2O75170 966 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 STIM1Q13586 685 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 ODF2Q5BJF6 829 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 SPATA1Q5VX52 437 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.35□□□□□ -0.91
SNX13-201ENST00000409076 ANKRD18AQ8IVF6 992 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 CCDC42Q96M95 316 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 MED15Q96RN5 788 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 LRWD1Q9UFC0 647 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 CDC23Q9UJX2 597 aa9.35□□□□□ -0.91
SNX13-201ENST00000409076 MAP3K15Q6ZN16 1313 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 MFAP3LO75121 409 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 RNF40O75150 1001 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 PMS1P54277 932 aaKnown RBP9.34□□□□□ -0.91
SNX13-201ENST00000409076 SNAP25P60880 206 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 RRAGAQ7L523 313 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 ZNF444Q8N0Y2 327 aaPredicted RBP9.34□□□□□ -0.91
SNX13-201ENST00000409076 SH2D3CQ8N5H7 860 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 RASSF4Q9H2L5 321 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 CNNM2Q9H8M5 875 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 EXOC1Q9NV70 894 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 RRP15Q9Y3B9 282 aaKnown RBP9.34□□□□□ -0.91
SNX13-201ENST00000409076 EPN1Q9Y6I3 576 aaPredicted RBP9.34□□□□□ -0.91
SNX13-201ENST00000409076 TECPR2O15040 1411 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 G3V3G9 751 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 KCNQ2O43526 872 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 PARP1P09874 1014 aaKnown RBP9.34□□□□□ -0.91
SNX13-201ENST00000409076 IFNAR1P17181 557 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 CYP2C19P33261 490 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 NTRK3Q16288 839 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 CCDC152Q4G0S7 254 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 DCAF8Q5TAQ9 597 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 SOGA3Q5TF21 947 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 DTHD1Q6ZMT9 781 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 SRP68Q9UHB9 627 aaKnown RBP9.34□□□□□ -0.91
SNX13-201ENST00000409076 RPN1P04843 607 aaKnown RBP9.34□□□□□ -0.91
SNX13-201ENST00000409076 CCDC40Q4G0X9 1142 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 CCDC70Q6NSX1 233 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 USP17L2Q6R6M4 530 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms