RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 CLGNO14967 610 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 ERC2O15083 957 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 HMGCRP04035 888 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 APPP05067 770 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 ZFYP08048 801 aaPredicted RBP11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 MAPK4P31152 587 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 TDO2P48775 406 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 PDE1AP54750 535 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 ZMYM1Q5SVZ6 1142 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 VPS53Q5VIR6 699 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 LBX2Q6XYB7 198 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 PLEKHH3Q7Z736 793 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 AMOTL1Q8IY63 956 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 IFNL3Q8IZI9 196 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 SPDYE1Q8NFV5 336 aaPredicted RBP11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 DDRGK1Q96HY6 314 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 VCPKMTQ9H867 229 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 FBXO28Q9NVF7 368 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 FLRT1Q9NZU1 646 aa11.52□□□□□ -0.57
NIF3L1-202ENST00000409020 A0A0G2JMZ2 1700 aa11.51□□□□□ -0.57
NIF3L1-202ENST00000409020 PATL2C9JE40 543 aaKnown RBP11.51□□□□□ -0.57
NIF3L1-202ENST00000409020 SGPL1O95470 568 aa11.51□□□□□ -0.57
NIF3L1-202ENST00000409020 WDR78Q5VTH9 848 aa11.51□□□□□ -0.57
NIF3L1-202ENST00000409020 DIS3LQ8TF46 1054 aaKnown RBP11.51□□□□□ -0.57
NIF3L1-202ENST00000409020 RNF25Q96BH1 459 aaPredicted RBP11.51□□□□□ -0.57
NIF3L1-202ENST00000409020 GCC1Q96CN9 775 aa11.51□□□□□ -0.57
NIF3L1-202ENST00000409020 ATG4CQ96DT6 458 aa11.51□□□□□ -0.57
NIF3L1-202ENST00000409020 NUP88Q99567 741 aaPredicted RBP11.51□□□□□ -0.57
NIF3L1-202ENST00000409020 NUDT12Q9BQG2 462 aa11.51□□□□□ -0.57
NIF3L1-202ENST00000409020 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.51□□□□□ -0.57
NIF3L1-202ENST00000409020 ARHGEF10LQ9HCE6 1279 aa11.51□□□□□ -0.57
NIF3L1-202ENST00000409020 INCENPQ9NQS7 918 aa11.51□□□□□ -0.57
NIF3L1-202ENST00000409020 TMEM51Q9NW97 253 aa11.51□□□□□ -0.57
NIF3L1-202ENST00000409020 STAP2Q9UGK3 403 aa11.51□□□□□ -0.57
NIF3L1-202ENST00000409020 GREB1LQ9C091 1923 aaPredicted RBP11.51□□□□□ -0.57
NIF3L1-202ENST00000409020 FLOT1O75955 427 aa11.5□□□□□ -0.57
NIF3L1-202ENST00000409020 PRKAR2AP13861 404 aaKnown RBP11.5□□□□□ -0.57
NIF3L1-202ENST00000409020 NUBP1P53384 320 aa11.5□□□□□ -0.57
NIF3L1-202ENST00000409020 IRX6P78412 446 aaPredicted RBP11.5□□□□□ -0.57
NIF3L1-202ENST00000409020 GIMAP6Q6P9H5 292 aa11.5□□□□□ -0.57
NIF3L1-202ENST00000409020 GTF3C2Q8WUA4 911 aaPredicted RBP11.5□□□□□ -0.57
NIF3L1-202ENST00000409020 CCDC17Q96LX7 622 aa11.5□□□□□ -0.57
NIF3L1-202ENST00000409020 FAM227BQ96M60 508 aa11.5□□□□□ -0.57
NIF3L1-202ENST00000409020 MOV10L1Q9BXT6 1211 aaKnown RBP11.5□□□□□ -0.57
NIF3L1-202ENST00000409020 PCDH10Q9P2E7 1040 aa11.5□□□□□ -0.57
NIF3L1-202ENST00000409020 TACC3Q9Y6A5 838 aa11.5□□□□□ -0.57
NIF3L1-202ENST00000409020 EYSQ5T1H1 3165 aa11.5□□□□□ -0.57
NIF3L1-202ENST00000409020 A0A0C4DFX4 3053 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 RAD21O60216 631 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 TFRCP02786 760 aaKnown RBP11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 PTMAP06454 111 aaKnown RBP11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 COG2Q14746 738 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 FAM83BQ5T0W9 1011 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 MAP3K21Q5TCX8 1036 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 TAF3Q5VWG9 929 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 CCAR1Q8IX12 1150 aaKnown RBP11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 SMC5Q8IY18 1101 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 SOCS4Q8WXH5 440 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 CRISPLD2Q9H0B8 497 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 KANSL2Q9H9L4 492 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 MKNK2Q9HBH9 465 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 IGKV6D-41A0A0C4DH26 115 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 A0A0D9SFI3 127 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 H0YGN5 161 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 FARP2O94887 1054 aaPredicted RBP11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 XRCC5P13010 732 aaKnown RBP11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 ZKSCAN1P17029 563 aaPredicted RBP11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 GNAT2P19087 354 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 PTPREP23469 700 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 CCND3P30281 292 aaPredicted RBP11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 MNX1P50219 401 aaPredicted RBP11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 CACNB2Q08289 660 aaPredicted RBP11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 GRB14Q14449 540 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 TMEM132BQ14DG7 1078 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 FAM47AQ5JRC9 791 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 RGS22Q8NE09 1264 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 NKX2-3Q8TAU0 364 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 LPAR1Q92633 364 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 ZNF830Q96NB3 372 aaPredicted RBP11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 SPATC1LQ9H0A9 340 aa11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 CWC22Q9HCG8 908 aaKnown RBP11.49□□□□□ -0.57
NIF3L1-202ENST00000409020 WDR46O15213 610 aaKnown RBP11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 ERCC3P19447 782 aa11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 RGS2P41220 211 aa11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 CTDSPL2Q05D32 466 aa11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 MAP2K5Q13163 448 aa11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 PLS1Q14651 629 aa11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 ZNF589Q86UQ0 364 aaPredicted RBP11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 CNPY4Q8N129 248 aa11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 LRRC47Q8N1G4 583 aaKnown RBP11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 NPLOC4Q8TAT6 608 aa11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 CHMP4CQ96CF2 233 aa11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 EVI5LQ96CN4 794 aa11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 CEP95Q96GE4 821 aa11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 PAWRQ96IZ0 340 aaKnown RBP11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 APBA2Q99767 749 aa11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 NAPBQ9H115 298 aa11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 SH2D4AQ9H788 454 aa11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 RRAGDQ9NQL2 400 aaPredicted RBP11.48□□□□□ -0.57
NIF3L1-202ENST00000409020 HOXC10Q9NYD6 342 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms