RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 CLNS1AP54105 237 aaKnown RBP13.25□□□□□ -0.29
SMCR8-201ENST00000406438 CABP7Q86V35 215 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 CSRNP1Q96S65 589 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 SEPT10Q9P0V9 454 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 N4BP1O75113 896 aaKnown RBP13.25□□□□□ -0.29
SMCR8-201ENST00000406438 VAMP4O75379 141 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 TNNC2P02585 160 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 KIF22Q14807 665 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 HADHQ16836 314 aaKnown RBP13.25□□□□□ -0.29
SMCR8-201ENST00000406438 RRAGAQ7L523 313 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 FAM193BQ96PV7 902 aaPredicted RBP13.25□□□□□ -0.29
SMCR8-201ENST00000406438 RAB20Q9NX57 234 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 DBN1Q16643 649 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 LONRF2Q1L5Z9 754 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 TGFBRAP1Q8WUH2 860 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 RPGRIP1Q96KN7 1286 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 ADPGKQ9BRR6 497 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 POLKQ9UBT6 870 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 CTAGE3PQ8IX95 158 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 ZBTB40Q9NUA8 1239 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 ANAPC5Q9UJX4 755 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 GOLGA8QA0A0J9YX86 632 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 TYW5A2RUC4 315 aaKnown RBP13.24□□□□□ -0.29
SMCR8-201ENST00000406438 GOLGA8OA6NCC3 632 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 GOLGA8NF8WBI6 632 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 LIG4P49917 911 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 PRPSAP1Q14558 356 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 ZBTB8OSQ8IWT0 167 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 TRIM58Q8NG06 486 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 DACT3Q96B18 629 aaPredicted RBP13.24□□□□□ -0.29
SMCR8-201ENST00000406438 NCOA5Q9HCD5 579 aaKnown RBP13.24□□□□□ -0.29
SMCR8-201ENST00000406438 RNF40O75150 1001 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 CCDC13Q8IYE1 715 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 FNBP4Q8N3X1 1017 aaPredicted RBP13.24□□□□□ -0.29
SMCR8-201ENST00000406438 GOLGA4Q13439 2230 aaKnown RBP13.24□□□□□ -0.29
SMCR8-201ENST00000406438 MUM1Q2TAK8 710 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 KRT71Q3SY84 523 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 EAPPQ56P03 285 aaPredicted RBP13.24□□□□□ -0.29
SMCR8-201ENST00000406438 CHURC1Q8WUH1 139 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 Q9H521 79 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 MAGEA1P43355 309 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 STX2P32856 288 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 TMTC4Q5T4D3 741 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 LSM14BQ9BX40 385 aaKnown RBP13.24□□□□□ -0.29
SMCR8-201ENST00000406438 H0YCG3 227 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 TMOD1P28289 359 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 FAM47CQ5HY64 1035 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMCR8-201ENST00000406438 CCDC87Q9NVE4 849 aa13.24□□□□□ -0.29
SMCR8-201ENST00000406438 PDE6CP51160 858 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 CTDSPL2Q05D32 466 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 COG7P83436 770 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 MLXIPQ9HAP2 919 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 C1orf112Q9NSG2 853 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 BABAM1Q9NWV8 329 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 STK38LQ9Y2H1 464 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 SAR1BQ9Y6B6 198 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 TESPA1A2RU30 521 aaPredicted RBP13.23□□□□□ -0.29
SMCR8-201ENST00000406438 EFCC1Q9HA90 598 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 INPP1P49441 399 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 CYP2J2P51589 502 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 NSMFQ6X4W1 530 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 ZNF75DP51815 510 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 DLGAP5Q15398 846 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 DIS3L2Q8IYB7 885 aaKnown RBP13.23□□□□□ -0.29
SMCR8-201ENST00000406438 UIMC1Q96RL1 719 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 ARPP21Q9UBL0 812 aaPredicted RBP13.23□□□□□ -0.29
SMCR8-201ENST00000406438 PCDHA12Q9UN75 941 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 ZNF532Q9HCE3 1301 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 MTX1Q13505 466 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 SCYL2Q6P3W7 929 aa13.23□□□□□ -0.29
SMCR8-201ENST00000406438 DNMT1P26358 1616 aaKnown RBP13.23□□□□□ -0.29
SMCR8-201ENST00000406438 HOXC9P31274 260 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 C8orf34Q49A92 452 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 NFE2L3Q9Y4A8 694 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 THAP12O43422 761 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 IFNB1P01574 187 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 MMEL1Q495T6 779 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 PNMA8AQ86V59 439 aaPredicted RBP13.22□□□□□ -0.29
SMCR8-201ENST00000406438 RDH13Q8NBN7 331 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 CARD6Q9BX69 1037 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 FAM207AQ9NSI2 230 aaPredicted RBP13.22□□□□□ -0.29
SMCR8-201ENST00000406438 TAF5LO75529 589 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 MIER3Q7Z3K6 550 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 TAB2Q9NYJ8 693 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 EPS15L1Q9UBC2 864 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 ARHGAP42A6NI28 874 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 SETSIPP0DME0 302 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 POLR2BP30876 1174 aaKnown RBP13.22□□□□□ -0.29
SMCR8-201ENST00000406438 KRIT1O00522 736 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 ADCY8P40145 1251 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 GPBP1Q86WP2 473 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 CBX8Q9HC52 389 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 CCPG1Q9ULG6 757 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 FAN1Q9Y2M0 1017 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 ASXL2Q76L83 1435 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 CTNNA1P35221 906 aaKnown RBP13.22□□□□□ -0.29
SMCR8-201ENST00000406438 PIK3CAP42336 1068 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 PABPC4Q13310 644 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMCR8-201ENST00000406438 KRT26Q7Z3Y9 468 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms