RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 VGLL4Q14135 290 aa25.58■■□□□ 1.69
EPCAM-202ENST00000405271 SLC10A4Q96EP9 437 aa25.58■■□□□ 1.69
EPCAM-202ENST00000405271 GOPCQ9HD26 462 aa25.58■■□□□ 1.69
EPCAM-202ENST00000405271 PRDM10Q9NQV6 1147 aa25.58■■□□□ 1.69
EPCAM-202ENST00000405271 FAM217BQ9NTX9 383 aaPredicted RBP25.58■■□□□ 1.69
EPCAM-202ENST00000405271 SNCAIPQ9Y6H5 919 aa25.58■■□□□ 1.69
EPCAM-202ENST00000405271 A0A1W2PRG0 241 aa25.58■■□□□ 1.68
EPCAM-202ENST00000405271 PTPRAP18433 802 aa25.58■■□□□ 1.68
EPCAM-202ENST00000405271 GNAQP50148 359 aa25.58■■□□□ 1.68
EPCAM-202ENST00000405271 ASPRV1Q53RT3 343 aa25.58■■□□□ 1.68
EPCAM-202ENST00000405271 CLMNQ96JQ2 1002 aa25.58■■□□□ 1.68
EPCAM-202ENST00000405271 WDR18Q9BV38 432 aa25.58■■□□□ 1.68
EPCAM-202ENST00000405271 TSKSQ9UJT2 592 aa25.58■■□□□ 1.68
EPCAM-202ENST00000405271 SMC3Q9UQE7 1217 aa25.58■■□□□ 1.68
EPCAM-202ENST00000405271 PARP1P09874 1014 aaKnown RBP25.57■■□□□ 1.68
EPCAM-202ENST00000405271 HMGN5P82970 282 aaKnown RBP25.57■■□□□ 1.68
EPCAM-202ENST00000405271 SPRYD3Q8NCJ5 442 aa25.57■■□□□ 1.68
EPCAM-202ENST00000405271 NSUN7Q8NE18 718 aaKnown RBP25.57■■□□□ 1.68
EPCAM-202ENST00000405271 SMARCC2Q8TAQ2 1214 aa25.57■■□□□ 1.68
EPCAM-202ENST00000405271 DCAF4Q8WV16 495 aa25.57■■□□□ 1.68
EPCAM-202ENST00000405271 MYH15Q9Y2K3 1946 aa25.56■■□□□ 1.68
EPCAM-202ENST00000405271 ADD1P35611 737 aaKnown RBP25.56■■□□□ 1.68
EPCAM-202ENST00000405271 MKRN3Q13064 507 aaKnown RBP25.56■■□□□ 1.68
EPCAM-202ENST00000405271 REM2Q8IYK8 340 aaPredicted RBP25.56■■□□□ 1.68
EPCAM-202ENST00000405271 ACER1Q8TDN7 264 aa25.56■■□□□ 1.68
EPCAM-202ENST00000405271 FEZ1Q99689 392 aa25.56■■□□□ 1.68
EPCAM-202ENST00000405271 CWC22Q9HCG8 908 aaKnown RBP25.56■■□□□ 1.68
EPCAM-202ENST00000405271 FOXD4L1Q9NU39 408 aa25.56■■□□□ 1.68
EPCAM-202ENST00000405271 STK36Q9NRP7 1315 aa25.55■■□□□ 1.68
EPCAM-202ENST00000405271 PTPDC1A2A3K4 754 aa25.55■■□□□ 1.68
EPCAM-202ENST00000405271 PALM3A6NDB9 673 aaPredicted RBP25.55■■□□□ 1.68
EPCAM-202ENST00000405271 CTDNEP1O95476 244 aa25.55■■□□□ 1.68
EPCAM-202ENST00000405271 IFNAR1P17181 557 aa25.55■■□□□ 1.68
EPCAM-202ENST00000405271 NTRK3Q16288 839 aa25.55■■□□□ 1.68
EPCAM-202ENST00000405271 GPATCH4Q5T3I0 446 aaKnown RBP25.55■■□□□ 1.68
EPCAM-202ENST00000405271 SPRYD7Q5W111 196 aa25.55■■□□□ 1.68
EPCAM-202ENST00000405271 SLFN13Q68D06 897 aa25.55■■□□□ 1.68
EPCAM-202ENST00000405271 TMTC3Q6ZXV5 915 aa25.55■■□□□ 1.68
EPCAM-202ENST00000405271 CCDC84Q86UT8 332 aaPredicted RBP25.55■■□□□ 1.68
EPCAM-202ENST00000405271 GMCL1Q96IK5 515 aa25.55■■□□□ 1.68
EPCAM-202ENST00000405271 KIAA1683Q9H0B3 1180 aa25.55■■□□□ 1.68
EPCAM-202ENST00000405271 VCPKMTQ9H867 229 aa25.55■■□□□ 1.68
EPCAM-202ENST00000405271 MAD2L2Q9UI95 211 aa25.55■■□□□ 1.68
EPCAM-202ENST00000405271 MTMR7Q9Y216 660 aa25.55■■□□□ 1.68
EPCAM-202ENST00000405271 F5H6K3 240 aa25.54■■□□□ 1.68
EPCAM-202ENST00000405271 KLRC3Q07444 240 aa25.54■■□□□ 1.68
EPCAM-202ENST00000405271 ZNF280CQ8ND82 737 aa25.54■■□□□ 1.68
EPCAM-202ENST00000405271 LZTS2Q9BRK4 669 aa25.54■■□□□ 1.68
EPCAM-202ENST00000405271 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.54■■□□□ 1.68
EPCAM-202ENST00000405271 NDUFB10O96000 172 aa25.53■■□□□ 1.68
EPCAM-202ENST00000405271 USP14P54578 494 aa25.53■■□□□ 1.68
EPCAM-202ENST00000405271 ZNF543Q08ER8 600 aa25.53■■□□□ 1.68
EPCAM-202ENST00000405271 KIF3AQ9Y496 699 aa25.53■■□□□ 1.68
EPCAM-202ENST00000405271 RLFQ13129 1914 aa25.53■■□□□ 1.68
EPCAM-202ENST00000405271 COL11A1P12107 1806 aaPredicted RBP25.53■■□□□ 1.68
EPCAM-202ENST00000405271 USP17L10C9JJH3 530 aa25.53■■□□□ 1.68
EPCAM-202ENST00000405271 GJB2P29033 226 aa25.53■■□□□ 1.68
EPCAM-202ENST00000405271 USP17L2Q6R6M4 530 aa25.53■■□□□ 1.68
EPCAM-202ENST00000405271 RASGRP2Q7LDG7 609 aa25.53■■□□□ 1.68
EPCAM-202ENST00000405271 RNF186Q9NXI6 227 aa25.53■■□□□ 1.68
EPCAM-202ENST00000405271 CNTNAP5Q8WYK1 1306 aa25.52■■□□□ 1.68
EPCAM-202ENST00000405271 JAK2O60674 1132 aa25.52■■□□□ 1.68
EPCAM-202ENST00000405271 PLEKHA8P1O95397 391 aa25.52■■□□□ 1.68
EPCAM-202ENST00000405271 SMARCA1P28370 1054 aa25.52■■□□□ 1.68
EPCAM-202ENST00000405271 SLC1A4P43007 532 aa25.52■■□□□ 1.68
EPCAM-202ENST00000405271 CCDC96Q2M329 555 aa25.52■■□□□ 1.68
EPCAM-202ENST00000405271 ERO1BQ86YB8 467 aa25.52■■□□□ 1.68
EPCAM-202ENST00000405271 TRIM22Q8IYM9 498 aa25.52■■□□□ 1.68
EPCAM-202ENST00000405271 STAG2Q8N3U4 1231 aa25.52■■□□□ 1.68
EPCAM-202ENST00000405271 LPAR1Q92633 364 aa25.52■■□□□ 1.68
EPCAM-202ENST00000405271 ZHX2Q9Y6X8 837 aa25.52■■□□□ 1.68
EPCAM-202ENST00000405271 SPDYE5A6NIY4 337 aa25.51■■□□□ 1.67
EPCAM-202ENST00000405271 RAD21O60216 631 aa25.51■■□□□ 1.67
EPCAM-202ENST00000405271 TRPA1O75762 1119 aa25.51■■□□□ 1.67
EPCAM-202ENST00000405271 TM4SF4P48230 202 aa25.51■■□□□ 1.67
EPCAM-202ENST00000405271 PPATQ06203 517 aa25.51■■□□□ 1.67
EPCAM-202ENST00000405271 RNF26Q9BY78 433 aaPredicted RBP25.51■■□□□ 1.67
EPCAM-202ENST00000405271 C19orf81C9J6K1 198 aa25.5■■□□□ 1.67
EPCAM-202ENST00000405271 KLRF2D3W0D1 207 aa25.5■■□□□ 1.67
EPCAM-202ENST00000405271 FMNL1O95466 1100 aaPredicted RBP25.5■■□□□ 1.67
EPCAM-202ENST00000405271 SSRP1Q08945 709 aaKnown RBP25.5■■□□□ 1.67
EPCAM-202ENST00000405271 FUT2Q10981 343 aa25.5■■□□□ 1.67
EPCAM-202ENST00000405271 SPP2Q13103 211 aa25.5■■□□□ 1.67
EPCAM-202ENST00000405271 MTMR2Q13614 643 aa25.5■■□□□ 1.67
EPCAM-202ENST00000405271 NBPF11Q86T75 865 aa25.5■■□□□ 1.67
EPCAM-202ENST00000405271 WNK4Q96J92 1243 aa25.5■■□□□ 1.67
EPCAM-202ENST00000405271 SPZ1Q9BXG8 430 aa25.5■■□□□ 1.67
EPCAM-202ENST00000405271 ELP3Q9H9T3 547 aa25.5■■□□□ 1.67
EPCAM-202ENST00000405271 SAGE1Q9NXZ1 904 aa25.5■■□□□ 1.67
EPCAM-202ENST00000405271 RBM27Q9P2N5 1060 aaKnown RBP25.5■■□□□ 1.67
EPCAM-202ENST00000405271 AFG3L2Q9Y4W6 797 aa25.5■■□□□ 1.67
EPCAM-202ENST00000405271 FRMPD2Q68DX3 1309 aaPredicted RBP25.5■■□□□ 1.67
EPCAM-202ENST00000405271 GOLGA8HP0CJ92 632 aa25.49■■□□□ 1.67
EPCAM-202ENST00000405271 ZBTB48P10074 688 aaPredicted RBP25.49■■□□□ 1.67
EPCAM-202ENST00000405271 BMP3P12645 472 aa25.49■■□□□ 1.67
EPCAM-202ENST00000405271 BACE1P56817 501 aa25.49■■□□□ 1.67
EPCAM-202ENST00000405271 SRBD1Q8N5C6 995 aaKnown RBP25.49■■□□□ 1.67
EPCAM-202ENST00000405271 FAM184AQ8NB25 1140 aa25.49■■□□□ 1.67
EPCAM-202ENST00000405271 C12orf42Q96LP6 360 aa25.49■■□□□ 1.67
EPCAM-202ENST00000405271 WDR46O15213 610 aaKnown RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms