RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 MTIF2P46199 727 aaKnown RBP17.21■□□□□ 0.35
MCF2L-205ENST00000397017 KRT79Q5XKE5 535 aa17.21■□□□□ 0.35
MCF2L-205ENST00000397017 USP49Q70CQ1 688 aa17.21■□□□□ 0.35
MCF2L-205ENST00000397017 CERS3Q8IU89 383 aa17.21■□□□□ 0.35
MCF2L-205ENST00000397017 EXOC1Q9NV70 894 aa17.21■□□□□ 0.35
MCF2L-205ENST00000397017 SORBS3O60504 671 aa17.21■□□□□ 0.35
MCF2L-205ENST00000397017 CDC42EP5Q6NZY7 148 aa17.21■□□□□ 0.35
MCF2L-205ENST00000397017 NFE2L3Q9Y4A8 694 aa17.21■□□□□ 0.35
MCF2L-205ENST00000397017 PRPF3O43395 683 aaKnown RBP17.2■□□□□ 0.34
MCF2L-205ENST00000397017 GRM1Q13255 1194 aa17.2■□□□□ 0.34
MCF2L-205ENST00000397017 NOM1Q5C9Z4 860 aaKnown RBP17.2■□□□□ 0.34
MCF2L-205ENST00000397017 DALRD3Q5D0E6 543 aaKnown RBP17.2■□□□□ 0.34
MCF2L-205ENST00000397017 NSMFQ6X4W1 530 aa17.2■□□□□ 0.34
MCF2L-205ENST00000397017 DGKHQ86XP1 1220 aa17.2■□□□□ 0.34
MCF2L-205ENST00000397017 PSTPIP2Q9H939 334 aa17.2■□□□□ 0.34
MCF2L-205ENST00000397017 MAEAQ7L5Y9 396 aa17.2■□□□□ 0.34
MCF2L-205ENST00000397017 FOXP1Q9H334 677 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-205ENST00000397017 MMRN2Q9H8L6 949 aa17.2■□□□□ 0.34
MCF2L-205ENST00000397017 ARHGEF10LQ9HCE6 1279 aa17.2■□□□□ 0.34
MCF2L-205ENST00000397017 PI4KBQ9UBF8 816 aa17.2■□□□□ 0.34
MCF2L-205ENST00000397017 FAM170AA1A519 330 aa17.2■□□□□ 0.34
MCF2L-205ENST00000397017 PCP11498 1178 aaKnown RBP17.2■□□□□ 0.34
MCF2L-205ENST00000397017 TM4SF1P30408 202 aa17.2■□□□□ 0.34
MCF2L-205ENST00000397017 GRIN1Q05586 938 aa17.2■□□□□ 0.34
MCF2L-205ENST00000397017 PIM2Q9P1W9 311 aa17.2■□□□□ 0.34
MCF2L-205ENST00000397017 NEMFO60524 1076 aa17.19■□□□□ 0.34
MCF2L-205ENST00000397017 TMEM260Q9NX78 707 aa17.19■□□□□ 0.34
MCF2L-205ENST00000397017 LRWD1Q9UFC0 647 aa17.19■□□□□ 0.34
MCF2L-205ENST00000397017 CTNND2Q9UQB3 1225 aa17.19■□□□□ 0.34
MCF2L-205ENST00000397017 RASA1P20936 1047 aa17.19■□□□□ 0.34
MCF2L-205ENST00000397017 MYL5Q02045 173 aa17.19■□□□□ 0.34
MCF2L-205ENST00000397017 KRBA2Q6ZNG9 492 aa17.19■□□□□ 0.34
MCF2L-205ENST00000397017 NBPF11Q86T75 865 aa17.19■□□□□ 0.34
MCF2L-205ENST00000397017 TBCKQ8TEA7 893 aa17.19■□□□□ 0.34
MCF2L-205ENST00000397017 VPS16Q9H269 839 aa17.19■□□□□ 0.34
MCF2L-205ENST00000397017 TCERG1LQ5VWI1 586 aa17.19■□□□□ 0.34
MCF2L-205ENST00000397017 PP2D1A8MPX8 630 aa17.18■□□□□ 0.34
MCF2L-205ENST00000397017 HOXA13P31271 388 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-205ENST00000397017 CALCRLQ16602 461 aa17.18■□□□□ 0.34
MCF2L-205ENST00000397017 SNX29Q8TEQ0 813 aa17.18■□□□□ 0.34
MCF2L-205ENST00000397017 HSP90AA2PQ14568 343 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-205ENST00000397017 POLD4Q9HCU8 107 aa17.18■□□□□ 0.34
MCF2L-205ENST00000397017 SLIT2O94813 1529 aa17.18■□□□□ 0.34
MCF2L-205ENST00000397017 USP17L15C9J2P7 530 aa17.18■□□□□ 0.34
MCF2L-205ENST00000397017 USP17L13C9JLJ4 530 aa17.18■□□□□ 0.34
MCF2L-205ENST00000397017 USP17L11C9JVI0 530 aa17.18■□□□□ 0.34
MCF2L-205ENST00000397017 USP17L18D6R9N7 530 aa17.18■□□□□ 0.34
MCF2L-205ENST00000397017 USP17L22D6RA61 530 aa17.18■□□□□ 0.34
MCF2L-205ENST00000397017 USP17L17D6RBQ6 530 aa17.18■□□□□ 0.34
MCF2L-205ENST00000397017 USP17L19D6RCP7 530 aa17.18■□□□□ 0.34
MCF2L-205ENST00000397017 USP17L20D6RJB6 530 aa17.18■□□□□ 0.34
MCF2L-205ENST00000397017 VEGFAP15692 232 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-205ENST00000397017 USP17L24Q0WX57 530 aa17.18■□□□□ 0.34
MCF2L-205ENST00000397017 USP17L6PQ6QN14 398 aa17.18■□□□□ 0.34
MCF2L-205ENST00000397017 TMEM87AQ8NBN3 555 aa17.18■□□□□ 0.34
MCF2L-205ENST00000397017 UQCRHLA0A096LP55 91 aa17.17■□□□□ 0.34
MCF2L-205ENST00000397017 USP17L10C9JJH3 530 aa17.17■□□□□ 0.34
MCF2L-205ENST00000397017 UQCRHP07919 91 aa17.17■□□□□ 0.34
MCF2L-205ENST00000397017 EEF2P13639 858 aaKnown RBP17.17■□□□□ 0.34
MCF2L-205ENST00000397017 TROAPQ12815 778 aa17.17■□□□□ 0.34
MCF2L-205ENST00000397017 NOLC1Q14978 699 aaKnown RBP eCLIP17.17■□□□□ 0.34
MCF2L-205ENST00000397017 PRR16Q569H4 304 aa17.17■□□□□ 0.34
MCF2L-205ENST00000397017 GOLGA8FQ08AF8 430 aa17.17■□□□□ 0.34
MCF2L-205ENST00000397017 GOLGA8DPQ0D2H9 430 aa17.17■□□□□ 0.34
MCF2L-205ENST00000397017 NCAPH2Q6IBW4 605 aa17.17■□□□□ 0.34
MCF2L-205ENST00000397017 KRT25Q7Z3Z0 450 aa17.17■□□□□ 0.34
MCF2L-205ENST00000397017 XPO4Q9C0E2 1151 aaKnown RBP17.17■□□□□ 0.34
MCF2L-205ENST00000397017 TAOK3Q9H2K8 898 aa17.17■□□□□ 0.34
MCF2L-205ENST00000397017 FANCLQ9NW38 375 aa17.17■□□□□ 0.34
MCF2L-205ENST00000397017 PLEKHG2Q9H7P9 1386 aa17.17■□□□□ 0.34
MCF2L-205ENST00000397017 TNNT1P13805 278 aa17.17■□□□□ 0.34
MCF2L-205ENST00000397017 ZNF75DP51815 510 aa17.17■□□□□ 0.34
MCF2L-205ENST00000397017 TICAM2Q86XR7 235 aa17.17■□□□□ 0.34
MCF2L-205ENST00000397017 CAVIN2O95810 425 aa17.16■□□□□ 0.34
MCF2L-205ENST00000397017 NLRP12P59046 1061 aa17.16■□□□□ 0.34
MCF2L-205ENST00000397017 CYP4A11Q02928 519 aa17.16■□□□□ 0.34
MCF2L-205ENST00000397017 ZBTB9Q96C00 473 aa17.16■□□□□ 0.34
MCF2L-205ENST00000397017 MYCLP12524 364 aaPredicted RBP17.16■□□□□ 0.34
MCF2L-205ENST00000397017 FANCCQ00597 558 aa17.16■□□□□ 0.34
MCF2L-205ENST00000397017 PDE4DQ08499 809 aa17.16■□□□□ 0.34
MCF2L-205ENST00000397017 CABP7Q86V35 215 aa17.16■□□□□ 0.34
MCF2L-205ENST00000397017 PCDHA4Q9UN74 947 aa17.16■□□□□ 0.34
MCF2L-205ENST00000397017 ORC4O43929 436 aa17.16■□□□□ 0.34
MCF2L-205ENST00000397017 WWC2Q6AWC2 1192 aa17.16■□□□□ 0.34
MCF2L-205ENST00000397017 NEK8Q86SG6 692 aa17.16■□□□□ 0.34
MCF2L-205ENST00000397017 RTFDC1Q9BY42 306 aaPredicted RBP17.16■□□□□ 0.34
MCF2L-205ENST00000397017 DEF6Q9H4E7 631 aa17.16■□□□□ 0.34
MCF2L-205ENST00000397017 STRCQ7RTU9 1775 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 H7C1D1 291 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 ALAS1P13196 640 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 DNA2P51530 1060 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 AMPD3Q01432 767 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 PTPN14Q15678 1187 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 CIAPIN1Q6FI81 312 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 SHC4Q6S5L8 630 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 ZFPM1Q8IX07 1006 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 PRMT6Q96LA8 375 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-205ENST00000397017 GPR75-ASB3A0A0A6YYF3 556 aa17.15■□□□□ 0.34
MCF2L-205ENST00000397017 IBSPP21815 317 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-205ENST00000397017 MNS1Q8NEH6 495 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms