RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 AS3MTQ9HBK9 375 aa17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 NCOA5Q9HCD5 579 aaKnown RBP17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 RBM28Q9NW13 759 aaKnown RBP17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 PASKQ96RG2 1323 aa17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 CCDC196A0A1B0GTZ2 297 aa17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 SYCE3A1L190 88 aa17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 DHX16O60231 1041 aaKnown RBP17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 PDHBP11177 359 aa17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 ECE1P42892 770 aa17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 MOB2Q70IA6 237 aa17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 CCDC84Q86UT8 332 aaPredicted RBP17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 CCDC144CPQ8IYA2 1237 aa17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 CTCFLQ8NI51 663 aaPredicted RBP17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 LLPHQ9BRT6 129 aaKnown RBP17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 ZNF408Q9H9D4 720 aa17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 GBA2Q9HCG7 927 aaPredicted RBP17.2■□□□□ 0.34
TM9SF1-202ENST00000396854 CELF2O95319 508 aaKnown RBP17.19■□□□□ 0.34
TM9SF1-202ENST00000396854 KIF5BP33176 963 aa17.19■□□□□ 0.34
TM9SF1-202ENST00000396854 SMC1BQ8NDV3 1235 aa17.19■□□□□ 0.34
TM9SF1-202ENST00000396854 SYAP1Q96A49 352 aaPredicted RBP17.19■□□□□ 0.34
TM9SF1-202ENST00000396854 LOC285556D6RIA3 1793 aa17.19■□□□□ 0.34
TM9SF1-202ENST00000396854 F5H6K3 240 aa17.19■□□□□ 0.34
TM9SF1-202ENST00000396854 ADD1P35611 737 aaKnown RBP17.19■□□□□ 0.34
TM9SF1-202ENST00000396854 KLRC3Q07444 240 aa17.19■□□□□ 0.34
TM9SF1-202ENST00000396854 NTRK3Q16288 839 aa17.19■□□□□ 0.34
TM9SF1-202ENST00000396854 TMEM87AQ8NBN3 555 aa17.19■□□□□ 0.34
TM9SF1-202ENST00000396854 KIAA1683Q9H0B3 1180 aa17.19■□□□□ 0.34
TM9SF1-202ENST00000396854 MAD2L2Q9UI95 211 aa17.19■□□□□ 0.34
TM9SF1-202ENST00000396854 SMC3Q9UQE7 1217 aa17.19■□□□□ 0.34
TM9SF1-202ENST00000396854 TCHHQ07283 1943 aa17.18■□□□□ 0.34
TM9SF1-202ENST00000396854 PALM3A6NDB9 673 aaPredicted RBP17.18■□□□□ 0.34
TM9SF1-202ENST00000396854 TOMM70O94826 608 aa17.18■□□□□ 0.34
TM9SF1-202ENST00000396854 CTDNEP1O95476 244 aa17.18■□□□□ 0.34
TM9SF1-202ENST00000396854 ZNF280CQ8ND82 737 aa17.18■□□□□ 0.34
TM9SF1-202ENST00000396854 NSUN7Q8NE18 718 aaKnown RBP17.18■□□□□ 0.34
TM9SF1-202ENST00000396854 RBM46Q8TBY0 533 aaKnown RBP17.18■□□□□ 0.34
TM9SF1-202ENST00000396854 DCAF4Q8WV16 495 aa17.18■□□□□ 0.34
TM9SF1-202ENST00000396854 GMCL1Q96IK5 515 aa17.18■□□□□ 0.34
TM9SF1-202ENST00000396854 VCPKMTQ9H867 229 aa17.18■□□□□ 0.34
TM9SF1-202ENST00000396854 GOPCQ9HD26 462 aa17.18■□□□□ 0.34
TM9SF1-202ENST00000396854 PARP14Q460N5 1801 aa17.18■□□□□ 0.34
TM9SF1-202ENST00000396854 PARP1P09874 1014 aaKnown RBP17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 ASPRV1Q53RT3 343 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 CST9Q5W186 159 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 SLFN13Q68D06 897 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 RASGRP2Q7LDG7 609 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 C2orf69Q8N8R5 385 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 ZNF784Q8NCA9 323 aaPredicted RBP17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 SMARCC2Q8TAQ2 1214 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 AFG3L2Q9Y4W6 797 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 ZHX2Q9Y6X8 837 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 SPDYE5A6NIY4 337 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 USP17L10C9JJH3 530 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 UBE2Q2LH0YL09 131 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 CPLX1O14810 134 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 NDUFB10O96000 172 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 IFNAR1P17181 557 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 GNAQP50148 359 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 PPATQ06203 517 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 CPLX2Q6PUV4 134 aaKnown RBP17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 USP17L2Q6R6M4 530 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 TMTC3Q6ZXV5 915 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 ERO1BQ86YB8 467 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 CLMNQ96JQ2 1002 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 FEZ1Q99689 392 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 MTMR7Q9Y216 660 aa17.17■□□□□ 0.34
TM9SF1-202ENST00000396854 CDKL5O76039 1030 aa17.16■□□□□ 0.34
TM9SF1-202ENST00000396854 BACE1P56817 501 aa17.16■□□□□ 0.34
TM9SF1-202ENST00000396854 ZNF543Q08ER8 600 aa17.16■□□□□ 0.34
TM9SF1-202ENST00000396854 SPP2Q13103 211 aa17.16■□□□□ 0.34
TM9SF1-202ENST00000396854 GPATCH4Q5T3I0 446 aaKnown RBP17.16■□□□□ 0.34
TM9SF1-202ENST00000396854 STAG2Q8N3U4 1231 aa17.16■□□□□ 0.34
TM9SF1-202ENST00000396854 LZTS2Q9BRK4 669 aa17.16■□□□□ 0.34
TM9SF1-202ENST00000396854 ELP3Q9H9T3 547 aa17.16■□□□□ 0.34
TM9SF1-202ENST00000396854 PLEKHA8P1O95397 391 aa17.16■□□□□ 0.34
TM9SF1-202ENST00000396854 USP14P54578 494 aa17.16■□□□□ 0.34
TM9SF1-202ENST00000396854 FUT2Q10981 343 aa17.16■□□□□ 0.34
TM9SF1-202ENST00000396854 LPAR1Q92633 364 aa17.16■□□□□ 0.34
TM9SF1-202ENST00000396854 C19orf81C9J6K1 198 aa17.15■□□□□ 0.34
TM9SF1-202ENST00000396854 ZSCAN22P10073 491 aaPredicted RBP17.15■□□□□ 0.34
TM9SF1-202ENST00000396854 MSNP26038 577 aaKnown RBP17.15■□□□□ 0.34
TM9SF1-202ENST00000396854 SMARCA1P28370 1054 aa17.15■□□□□ 0.34
TM9SF1-202ENST00000396854 GJB2P29033 226 aa17.15■□□□□ 0.34
TM9SF1-202ENST00000396854 SLC1A4P43007 532 aa17.15■□□□□ 0.34
TM9SF1-202ENST00000396854 HMGN5P82970 282 aaKnown RBP17.15■□□□□ 0.34
TM9SF1-202ENST00000396854 MTMR2Q13614 643 aa17.15■□□□□ 0.34
TM9SF1-202ENST00000396854 KIAA1755Q5JYT7 1200 aa17.15■□□□□ 0.34
TM9SF1-202ENST00000396854 C12orf42Q96LP6 360 aa17.15■□□□□ 0.34
TM9SF1-202ENST00000396854 CNTNAP5Q8WYK1 1306 aa17.15■□□□□ 0.34
TM9SF1-202ENST00000396854 STK36Q9NRP7 1315 aa17.15■□□□□ 0.34
TM9SF1-202ENST00000396854 PTPDC1A2A3K4 754 aa17.14■□□□□ 0.33
TM9SF1-202ENST00000396854 JAK2O60674 1132 aa17.14■□□□□ 0.33
TM9SF1-202ENST00000396854 PPIL2Q13356 520 aa17.14■□□□□ 0.33
TM9SF1-202ENST00000396854 NBPF11Q86T75 865 aa17.14■□□□□ 0.33
TM9SF1-202ENST00000396854 SRBD1Q8N5C6 995 aaKnown RBP17.14■□□□□ 0.33
TM9SF1-202ENST00000396854 TSPY26PQ9H489 355 aa17.14■□□□□ 0.33
TM9SF1-202ENST00000396854 NOL7Q9UMY1 257 aaKnown RBP17.14■□□□□ 0.33
TM9SF1-202ENST00000396854 KLRF2D3W0D1 207 aa17.14■□□□□ 0.33
TM9SF1-202ENST00000396854 GOLGA8HP0CJ92 632 aa17.14■□□□□ 0.33
TM9SF1-202ENST00000396854 PDIA4P13667 645 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms