RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 MYH8P13535 1937 aa13.88□□□□□ -0.19
ITGB1-202ENST00000396033 GOLGA6L6A8MZA4 724 aa13.88□□□□□ -0.19
ITGB1-202ENST00000396033 METTL16Q86W50 562 aaKnown RBP13.88□□□□□ -0.19
ITGB1-202ENST00000396033 C7orf43Q8WVR3 580 aa13.88□□□□□ -0.19
ITGB1-202ENST00000396033 SPZ1Q9BXG8 430 aa13.88□□□□□ -0.19
ITGB1-202ENST00000396033 CPVLQ9H3G5 476 aa13.88□□□□□ -0.19
ITGB1-202ENST00000396033 ADAMTS3O15072 1205 aa13.87□□□□□ -0.19
ITGB1-202ENST00000396033 POLR2DO15514 142 aaKnown RBP13.87□□□□□ -0.19
ITGB1-202ENST00000396033 TRAPPC10P48553 1259 aa13.87□□□□□ -0.19
ITGB1-202ENST00000396033 SF3B2Q13435 895 aaKnown RBP13.87□□□□□ -0.19
ITGB1-202ENST00000396033 PLA2G4DQ86XP0 818 aa13.87□□□□□ -0.19
ITGB1-202ENST00000396033 ZNF830Q96NB3 372 aaPredicted RBP13.87□□□□□ -0.19
ITGB1-202ENST00000396033 MTMR4Q9NYA4 1195 aa13.87□□□□□ -0.19
ITGB1-202ENST00000396033 HOOK1Q9UJC3 728 aaKnown RBP13.87□□□□□ -0.19
ITGB1-202ENST00000396033 NOVP48745 357 aa13.87□□□□□ -0.19
ITGB1-202ENST00000396033 TYW1BQ6NUM6 668 aa13.87□□□□□ -0.19
ITGB1-202ENST00000396033 PDGFDQ9GZP0 370 aaPredicted RBP13.87□□□□□ -0.19
ITGB1-202ENST00000396033 TUBE1Q9UJT0 475 aa13.87□□□□□ -0.19
ITGB1-202ENST00000396033 PCDHAC2Q9Y5I4 1007 aa13.87□□□□□ -0.19
ITGB1-202ENST00000396033 EIF6P56537 245 aaKnown RBP13.87□□□□□ -0.19
ITGB1-202ENST00000396033 ISM2Q6H9L7 571 aa13.87□□□□□ -0.19
ITGB1-202ENST00000396033 DRC7Q8IY82 874 aa13.87□□□□□ -0.19
ITGB1-202ENST00000396033 LRRC47Q8N1G4 583 aaKnown RBP13.87□□□□□ -0.19
ITGB1-202ENST00000396033 FERMT2Q96AC1 680 aa13.87□□□□□ -0.19
ITGB1-202ENST00000396033 BARHL2Q9NY43 387 aa13.87□□□□□ -0.19
ITGB1-202ENST00000396033 STXBP3O00186 592 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 CACNB3P54284 484 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 KIAA2012Q0VF49 1180 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 CC2D2BQ6DHV5 1058 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 HOMER1Q86YM7 354 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 PDILTQ8N807 584 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 SUPT20HQ8NEM7 779 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 RASGRP4Q8TDF6 673 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 TTC12Q9H892 705 aaPredicted RBP13.86□□□□□ -0.19
ITGB1-202ENST00000396033 MYO3BQ8WXR4 1341 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 USP17L5A8MUK1 530 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 C21orf2O43822 256 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 BAG6P46379 1132 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 BPIFA3Q9BQP9 254 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 PPIP5K2O43314 1243 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 ZNF500O60304 480 aaPredicted RBP13.86□□□□□ -0.19
ITGB1-202ENST00000396033 MCM7P33993 719 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 SHMT1P34896 483 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 PTGDRQ13258 359 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 SARM1Q6SZW1 724 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 USP49Q70CQ1 688 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 CLEC10AQ8IUN9 316 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 TSC1Q92574 1164 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 RRP36Q96EU6 259 aaKnown RBP13.86□□□□□ -0.19
ITGB1-202ENST00000396033 SEC63Q9UGP8 760 aaKnown RBP13.86□□□□□ -0.19
ITGB1-202ENST00000396033 SERTAD1Q9UHV2 236 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 C10orf71Q711Q0 1435 aa13.86□□□□□ -0.19
ITGB1-202ENST00000396033 CCDC194A0A1B0GVG4 234 aa13.85□□□□□ -0.19
ITGB1-202ENST00000396033 ATP2C1P98194 919 aaPredicted RBP13.85□□□□□ -0.19
ITGB1-202ENST00000396033 HDLBPQ00341 1268 aaKnown RBP13.85□□□□□ -0.19
ITGB1-202ENST00000396033 TCP10Q12799 353 aa13.85□□□□□ -0.19
ITGB1-202ENST00000396033 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.85□□□□□ -0.19
ITGB1-202ENST00000396033 DEFB132Q7Z7B7 95 aa13.85□□□□□ -0.19
ITGB1-202ENST00000396033 MRIQ9BWK5 157 aa13.85□□□□□ -0.19
ITGB1-202ENST00000396033 FRMPD2Q68DX3 1309 aaPredicted RBP13.85□□□□□ -0.19
ITGB1-202ENST00000396033 IGKV6D-41A0A0C4DH26 115 aa13.85□□□□□ -0.19
ITGB1-202ENST00000396033 MPHOSPH10O00566 681 aaKnown RBP13.85□□□□□ -0.19
ITGB1-202ENST00000396033 FOXN1O15353 648 aa13.85□□□□□ -0.19
ITGB1-202ENST00000396033 PDHBP11177 359 aa13.85□□□□□ -0.19
ITGB1-202ENST00000396033 GALNT17Q6IS24 598 aa13.85□□□□□ -0.19
ITGB1-202ENST00000396033 ZFPM1Q8IX07 1006 aa13.85□□□□□ -0.19
ITGB1-202ENST00000396033 ELOA2Q8IYF1 753 aaPredicted RBP13.85□□□□□ -0.19
ITGB1-202ENST00000396033 ZNF646O15015 1829 aaPredicted RBP13.85□□□□□ -0.19
ITGB1-202ENST00000396033 TTLL1O95922 423 aa13.85□□□□□ -0.19
ITGB1-202ENST00000396033 TPM3P06753 285 aa13.85□□□□□ -0.19
ITGB1-202ENST00000396033 NAPAP54920 295 aa13.85□□□□□ -0.19
ITGB1-202ENST00000396033 DAGLBQ8NCG7 672 aa13.85□□□□□ -0.19
ITGB1-202ENST00000396033 VAT1LQ9HCJ6 419 aa13.85□□□□□ -0.19
ITGB1-202ENST00000396033 ZHX1Q9UKY1 873 aaPredicted RBP13.85□□□□□ -0.19
ITGB1-202ENST00000396033 A0A0U1RQG5 324 aaPredicted RBP13.84□□□□□ -0.19
ITGB1-202ENST00000396033 VWA3AA6NCI4 1184 aa13.84□□□□□ -0.19
ITGB1-202ENST00000396033 POSTNQ15063 836 aa13.84□□□□□ -0.19
ITGB1-202ENST00000396033 CCDC12Q8WUD4 166 aaPredicted RBP13.84□□□□□ -0.19
ITGB1-202ENST00000396033 SYMPKQ92797 1274 aaKnown RBP13.84□□□□□ -0.19
ITGB1-202ENST00000396033 EPSTI1Q96J88 318 aa13.84□□□□□ -0.19
ITGB1-202ENST00000396033 EHD4Q9H223 541 aa13.84□□□□□ -0.19
ITGB1-202ENST00000396033 CLIP2Q9UDT6 1046 aa13.84□□□□□ -0.19
ITGB1-202ENST00000396033 SERPINA10Q9UK55 444 aa13.84□□□□□ -0.19
ITGB1-202ENST00000396033 ZNF710Q8N1W2 664 aa13.84□□□□□ -0.19
ITGB1-202ENST00000396033 PCDHA6Q9UN73 950 aa13.84□□□□□ -0.19
ITGB1-202ENST00000396033 PCDHA8Q9Y5H6 950 aa13.84□□□□□ -0.19
ITGB1-202ENST00000396033 PCDHA5Q9Y5H7 936 aa13.84□□□□□ -0.19
ITGB1-202ENST00000396033 ACTN4O43707 911 aaKnown RBP13.84□□□□□ -0.19
ITGB1-202ENST00000396033 ZSCAN20P17040 1043 aaPredicted RBP13.84□□□□□ -0.19
ITGB1-202ENST00000396033 ZSCAN29Q8IWY8 852 aaPredicted RBP13.84□□□□□ -0.19
ITGB1-202ENST00000396033 DHX58Q96C10 678 aa13.84□□□□□ -0.19
ITGB1-202ENST00000396033 UBA5Q9GZZ9 404 aa13.84□□□□□ -0.19
ITGB1-202ENST00000396033 UQCRHLA0A096LP55 91 aa13.83□□□□□ -0.19
ITGB1-202ENST00000396033 M0R2N6 131 aa13.83□□□□□ -0.19
ITGB1-202ENST00000396033 UQCRHP07919 91 aa13.83□□□□□ -0.19
ITGB1-202ENST00000396033 SMARCA1P28370 1054 aa13.83□□□□□ -0.19
ITGB1-202ENST00000396033 TPM4P67936 248 aa13.83□□□□□ -0.19
ITGB1-202ENST00000396033 MDM2Q00987 491 aaPredicted RBP13.83□□□□□ -0.19
ITGB1-202ENST00000396033 ASPRV1Q53RT3 343 aa13.83□□□□□ -0.19
ITGB1-202ENST00000396033 FAM177A1Q8N128 213 aaPredicted RBP13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms