RNA–Protein interactions for RNA: ENST00000395986.6

BDNF-207, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 3,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-207ENST00000395986 WASHC4Q2M389 1173 aa8.2□□□□□ -1.1
BDNF-207ENST00000395986 SEC16BQ96JE7 1060 aa8.2□□□□□ -1.1
BDNF-207ENST00000395986 EPAS1Q99814 870 aa8.2□□□□□ -1.1
BDNF-207ENST00000395986 SELENOSQ9BQE4 189 aa8.2□□□□□ -1.1
BDNF-207ENST00000395986 RCCD1A6NED2 376 aa8.2□□□□□ -1.1
BDNF-207ENST00000395986 SPDYE5A6NIY4 337 aa8.2□□□□□ -1.1
BDNF-207ENST00000395986 ZNF233A6NK53 670 aa8.2□□□□□ -1.1
BDNF-207ENST00000395986 PIP4K2AP48426 406 aaPredicted RBP8.2□□□□□ -1.1
BDNF-207ENST00000395986 ELF3P78545 371 aaPredicted RBP8.2□□□□□ -1.1
BDNF-207ENST00000395986 MIS18BP1Q6P0N0 1132 aa8.2□□□□□ -1.1
BDNF-207ENST00000395986 CNGA4Q8IV77 575 aa8.2□□□□□ -1.1
BDNF-207ENST00000395986 UBLCP1Q8WVY7 318 aaPredicted RBP8.2□□□□□ -1.1
BDNF-207ENST00000395986 TRIM31Q9BZY9 425 aa8.2□□□□□ -1.1
BDNF-207ENST00000395986 ABHD10Q9NUJ1 306 aa8.2□□□□□ -1.1
BDNF-207ENST00000395986 RHBDL2Q9NX52 303 aa8.2□□□□□ -1.1
BDNF-207ENST00000395986 KCNJ14Q9UNX9 436 aa8.2□□□□□ -1.1
BDNF-207ENST00000395986 PREX1Q8TCU6 1659 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 SASH1O94885 1247 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 YEATS4O95619 227 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 VAV2P52735 878 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 AMPD2Q01433 879 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 TLDC1Q6P9B6 456 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 CYP26C1Q6V0L0 522 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 UBAC1Q9BSL1 405 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 STIM2Q9P246 746 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 DENND2AQ9ULE3 1009 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 SRCAPQ6ZRS2 3230 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 AOX1Q06278 1338 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 MOCS3O95396 460 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 CD44P16070 742 aaKnown RBP8.19□□□□□ -1.1
BDNF-207ENST00000395986 TMEM62Q0P6H9 643 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 NBPF14Q5TI25 921 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 TRAPPC11Q7Z392 1133 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 ERICH1Q86X53 443 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 DDX42Q86XP3 938 aaKnown RBP eCLIP8.19□□□□□ -1.1
BDNF-207ENST00000395986 PANX2Q96RD6 677 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 PACSIN2Q9UNF0 486 aaPredicted RBP8.19□□□□□ -1.1
BDNF-207ENST00000395986 NOVA2Q9UNW9 492 aaKnown RBP8.19□□□□□ -1.1
BDNF-207ENST00000395986 C15orf41Q9Y2V0 281 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 SYNRGQ9UMZ2 1314 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 TMCO5BA8MYB1 307 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 DCDC2CA8MYV0 355 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 VIMP08670 466 aaKnown RBP8.19□□□□□ -1.1
BDNF-207ENST00000395986 TPP2P29144 1249 aaPredicted RBP8.19□□□□□ -1.1
BDNF-207ENST00000395986 KCNJ2P63252 427 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 CKAP4Q07065 602 aaKnown RBP8.19□□□□□ -1.1
BDNF-207ENST00000395986 MIGA2Q7L4E1 593 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 TMTC1Q8IUR5 882 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 KLHL23Q8NBE8 558 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 TRIM58Q8NG06 486 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 HMG20BQ9P0W2 317 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 PLAAQ9Y263 795 aa8.19□□□□□ -1.1
BDNF-207ENST00000395986 EFCAB6Q5THR3 1501 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 hCG_1642624A0A1W2PR95 340 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 GMNCA6NCL1 334 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 E7EWF7 191 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 FAM107AO95990 144 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 TUBBP07437 444 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 IGHMBP2P38935 993 aaKnown RBP8.18□□□□□ -1.1
BDNF-207ENST00000395986 RNASELQ05823 741 aaKnown RBP8.18□□□□□ -1.1
BDNF-207ENST00000395986 POLA2Q14181 598 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 SLC39A14Q15043 492 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 MGARPQ8TDB4 240 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 NUDT16Q96DE0 195 aaKnown RBP8.18□□□□□ -1.1
BDNF-207ENST00000395986 MLXIPLQ9NP71 852 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 VPS54Q9P1Q0 977 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 TUBE1Q9UJT0 475 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 REXO2Q9Y3B8 237 aaKnown RBP8.18□□□□□ -1.1
BDNF-207ENST00000395986 TET3O43151 1660 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 DPPA5A6NC42 116 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 TTC36A6NLP5 189 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 HIP1O00291 1037 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 KCNQ3O43525 872 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 HEXIM1O94992 359 aaKnown RBP8.18□□□□□ -1.1
BDNF-207ENST00000395986 KIF23Q02241 960 aaPredicted RBP8.18□□□□□ -1.1
BDNF-207ENST00000395986 TRIM29Q14134 588 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 NPATQ14207 1427 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 LRRC23Q53EV4 343 aaPredicted RBP8.18□□□□□ -1.1
BDNF-207ENST00000395986 GKAP1Q5VSY0 366 aaPredicted RBP8.18□□□□□ -1.1
BDNF-207ENST00000395986 RRAGBQ5VZM2 374 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 TMC4Q7Z404 712 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 CADPS2Q86UW7 1296 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 PLIN2Q99541 437 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 MTRQ99707 1265 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 ELAC2Q9BQ52 826 aaKnown RBP8.18□□□□□ -1.1
BDNF-207ENST00000395986 AATFQ9NY61 560 aaKnown RBP eCLIP8.18□□□□□ -1.1
BDNF-207ENST00000395986 LRWD1Q9UFC0 647 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 LNPEPQ9UIQ6 1025 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 TRIM33Q9UPN9 1127 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 LMTK3Q96Q04 1460 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 TTC26A0AVF1 554 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 GLI1P08151 1106 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 TRIM21P19474 475 aaKnown RBP8.18□□□□□ -1.1
BDNF-207ENST00000395986 KLK7P49862 253 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 TUBP50607 506 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 RRP12Q5JTH9 1297 aaKnown RBP8.18□□□□□ -1.1
BDNF-207ENST00000395986 PPP1R15BQ5SWA1 713 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 RCSD1Q6JBY9 416 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 ARMCX6Q7L4S7 300 aa8.18□□□□□ -1.1
BDNF-207ENST00000395986 CCDC50Q8IVM0 306 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms