RNA–Protein interactions for RNA: ENST00000395837.1

UBB-202, Transcript of ubiquitin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene UBB, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-202ENST00000395837 TMEM132BQ14DG7 1078 aa11.78□□□□□ -0.52
UBB-202ENST00000395837 SHHQ15465 462 aa11.78□□□□□ -0.52
UBB-202ENST00000395837 GUCD1Q96NT3 240 aa11.78□□□□□ -0.52
UBB-202ENST00000395837 GOPCQ9HD26 462 aa11.78□□□□□ -0.52
UBB-202ENST00000395837 XPNPEP3Q9NQH7 507 aa11.78□□□□□ -0.52
UBB-202ENST00000395837 ATP8A2Q9NTI2 1148 aa11.78□□□□□ -0.52
UBB-202ENST00000395837 TMX2Q9Y320 296 aa11.78□□□□□ -0.52
UBB-202ENST00000395837 CTDP1Q9Y5B0 961 aaPredicted RBP11.78□□□□□ -0.52
UBB-202ENST00000395837 PQBP1O60828 265 aaKnown RBP11.77□□□□□ -0.53
UBB-202ENST00000395837 PGK1P00558 417 aa11.77□□□□□ -0.53
UBB-202ENST00000395837 LRRC41Q15345 812 aa11.77□□□□□ -0.53
UBB-202ENST00000395837 C9orf50Q5SZB4 431 aa11.77□□□□□ -0.53
UBB-202ENST00000395837 FAM83BQ5T0W9 1011 aa11.77□□□□□ -0.53
UBB-202ENST00000395837 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.77□□□□□ -0.53
UBB-202ENST00000395837 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.77□□□□□ -0.53
UBB-202ENST00000395837 COL25A1Q9BXS0 654 aaPredicted RBP11.77□□□□□ -0.53
UBB-202ENST00000395837 DDX19BQ9UMR2 479 aa11.77□□□□□ -0.53
UBB-202ENST00000395837 MINDY4BA8MYZ0 360 aa11.76□□□□□ -0.53
UBB-202ENST00000395837 SMARCA5O60264 1052 aaPredicted RBP11.76□□□□□ -0.53
UBB-202ENST00000395837 RAB11FIP3O75154 756 aa11.76□□□□□ -0.53
UBB-202ENST00000395837 SLC25A27O95847 323 aa11.76□□□□□ -0.53
UBB-202ENST00000395837 TLE2Q04725 743 aa11.76□□□□□ -0.53
UBB-202ENST00000395837 C12orf60Q5U649 245 aa11.76□□□□□ -0.53
UBB-202ENST00000395837 ZSCAN25Q6NSZ9 544 aa11.76□□□□□ -0.53
UBB-202ENST00000395837 SH3RF1Q7Z6J0 888 aa11.76□□□□□ -0.53
UBB-202ENST00000395837 RNF180Q86T96 592 aa11.76□□□□□ -0.53
UBB-202ENST00000395837 SIAH1Q8IUQ4 282 aa11.76□□□□□ -0.53
UBB-202ENST00000395837 RPAP2Q8IXW5 612 aaPredicted RBP11.76□□□□□ -0.53
UBB-202ENST00000395837 ABRAQ8N0Z2 381 aa11.76□□□□□ -0.53
UBB-202ENST00000395837 LENG1Q96BZ8 264 aaPredicted RBP11.76□□□□□ -0.53
UBB-202ENST00000395837 CCDC17Q96LX7 622 aa11.76□□□□□ -0.53
UBB-202ENST00000395837 NUP88Q99567 741 aaPredicted RBP11.76□□□□□ -0.53
UBB-202ENST00000395837 MKNK2Q9HBH9 465 aa11.76□□□□□ -0.53
UBB-202ENST00000395837 PDLIM7Q9NR12 457 aa11.76□□□□□ -0.53
UBB-202ENST00000395837 CNPY2Q9Y2B0 182 aa11.76□□□□□ -0.53
UBB-202ENST00000395837 MYH8P13535 1937 aa11.76□□□□□ -0.53
UBB-202ENST00000395837 ZNF236Q9UL36 1845 aa11.75□□□□□ -0.53
UBB-202ENST00000395837 TAL1P17542 331 aaPredicted RBP11.75□□□□□ -0.53
UBB-202ENST00000395837 STAT3P40763 770 aa11.75□□□□□ -0.53
UBB-202ENST00000395837 C16orf86Q6ZW13 317 aa11.75□□□□□ -0.53
UBB-202ENST00000395837 CPXCR1Q8N123 301 aa11.75□□□□□ -0.53
UBB-202ENST00000395837 CHMP4CQ96CF2 233 aa11.75□□□□□ -0.53
UBB-202ENST00000395837 DDX11Q96FC9 970 aa11.75□□□□□ -0.53
UBB-202ENST00000395837 HAUS7Q99871 368 aa11.75□□□□□ -0.53
UBB-202ENST00000395837 KANSL2Q9H9L4 492 aa11.75□□□□□ -0.53
UBB-202ENST00000395837 ZHX1Q9UKY1 873 aaPredicted RBP11.75□□□□□ -0.53
UBB-202ENST00000395837 ZBED9Q6R2W3 1325 aa11.75□□□□□ -0.53
UBB-202ENST00000395837 A0A0G2JMZ2 1700 aa11.74□□□□□ -0.53
UBB-202ENST00000395837 TRIM43BA6NCK2 446 aa11.74□□□□□ -0.53
UBB-202ENST00000395837 POTEB2H3BUK9 544 aa11.74□□□□□ -0.53
UBB-202ENST00000395837 VWA5AO00534 786 aa11.74□□□□□ -0.53
UBB-202ENST00000395837 APPP05067 770 aa11.74□□□□□ -0.53
UBB-202ENST00000395837 CLTBP09497 229 aa11.74□□□□□ -0.53
UBB-202ENST00000395837 AKR1A1P14550 325 aa11.74□□□□□ -0.53
UBB-202ENST00000395837 RAG1P15918 1043 aa11.74□□□□□ -0.53
UBB-202ENST00000395837 ATP5JP18859 108 aa11.74□□□□□ -0.53
UBB-202ENST00000395837 SNRNP48Q6IEG0 339 aaKnown RBP11.74□□□□□ -0.53
UBB-202ENST00000395837 CTR9Q6PD62 1173 aa11.74□□□□□ -0.53
UBB-202ENST00000395837 RIOX2Q8IUF8 465 aa11.74□□□□□ -0.53
UBB-202ENST00000395837 SIRT2Q8IXJ6 389 aa11.74□□□□□ -0.53
UBB-202ENST00000395837 TRIM43Q96BQ3 446 aaPredicted RBP11.74□□□□□ -0.53
UBB-202ENST00000395837 RNPC3Q96LT9 517 aaKnown RBP11.74□□□□□ -0.53
UBB-202ENST00000395837 CDX2Q99626 313 aaPredicted RBP11.74□□□□□ -0.53
UBB-202ENST00000395837 TINF2Q9BSI4 451 aa11.74□□□□□ -0.53
UBB-202ENST00000395837 LRRCC1Q9C099 1032 aa11.74□□□□□ -0.53
UBB-202ENST00000395837 PUS7LQ9H0K6 701 aaKnown RBP11.74□□□□□ -0.53
UBB-202ENST00000395837 TMEM39AQ9NV64 488 aa11.74□□□□□ -0.53
UBB-202ENST00000395837 ARPP21Q9UBL0 812 aaPredicted RBP11.74□□□□□ -0.53
UBB-202ENST00000395837 PPP1R9AQ9ULJ8 1098 aa11.74□□□□□ -0.53
UBB-202ENST00000395837 BAZ2AQ9UIF9 1905 aaKnown RBP11.74□□□□□ -0.53
UBB-202ENST00000395837 A0A1W2PQ45 241 aaPredicted RBP11.73□□□□□ -0.53
UBB-202ENST00000395837 A0A1W2PQY0 241 aa11.73□□□□□ -0.53
UBB-202ENST00000395837 TDO2P48775 406 aa11.73□□□□□ -0.53
UBB-202ENST00000395837 UBE3CQ15386 1083 aa11.73□□□□□ -0.53
UBB-202ENST00000395837 DIEXFQ68CQ4 756 aaKnown RBP11.73□□□□□ -0.53
UBB-202ENST00000395837 FAM109BQ6ICB4 259 aaPredicted RBP11.73□□□□□ -0.53
UBB-202ENST00000395837 MAFAQ8NHW3 353 aaPredicted RBP11.73□□□□□ -0.53
UBB-202ENST00000395837 MYLIPQ8WY64 445 aa11.73□□□□□ -0.53
UBB-202ENST00000395837 KIFC2Q96AC6 838 aa11.73□□□□□ -0.53
UBB-202ENST00000395837 VTI1AQ96AJ9 217 aa11.73□□□□□ -0.53
UBB-202ENST00000395837 SLF1Q9BQI6 1058 aa11.73□□□□□ -0.53
UBB-202ENST00000395837 STARD7Q9NQZ5 370 aa11.73□□□□□ -0.53
UBB-202ENST00000395837 ZBTB40Q9NUA8 1239 aa11.73□□□□□ -0.53
UBB-202ENST00000395837 TACC3Q9Y6A5 838 aa11.73□□□□□ -0.53
UBB-202ENST00000395837 LTBP2Q14767 1821 aa11.72□□□□□ -0.53
UBB-202ENST00000395837 ZBED4O75132 1171 aa11.72□□□□□ -0.53
UBB-202ENST00000395837 PRDM1O75626 825 aa11.72□□□□□ -0.53
UBB-202ENST00000395837 FOSL2P15408 326 aa11.72□□□□□ -0.53
UBB-202ENST00000395837 COPB2P35606 906 aa11.72□□□□□ -0.53
UBB-202ENST00000395837 ZNF792Q3KQV3 632 aa11.72□□□□□ -0.53
UBB-202ENST00000395837 TSHZ3Q63HK5 1081 aa11.72□□□□□ -0.53
UBB-202ENST00000395837 GPATCH3Q96I76 525 aa11.72□□□□□ -0.53
UBB-202ENST00000395837 TEX13BQ9BXU2 312 aa11.72□□□□□ -0.53
UBB-202ENST00000395837 SEMA6BQ9H3T3 888 aa11.72□□□□□ -0.53
UBB-202ENST00000395837 CHMP4BQ9H444 224 aaKnown RBP11.72□□□□□ -0.53
UBB-202ENST00000395837 HOMER2Q9NSB8 354 aa11.72□□□□□ -0.53
UBB-202ENST00000395837 CLIP2Q9UDT6 1046 aa11.72□□□□□ -0.53
UBB-202ENST00000395837 ZNF214Q9UL59 606 aaPredicted RBP11.72□□□□□ -0.53
UBB-202ENST00000395837 PHF24Q9UPV7 400 aa11.72□□□□□ -0.53
UBB-202ENST00000395837 LAMA2P24043 3122 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms