RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 RASGRP4Q8TDF6 673 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 CHP1Q99653 195 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 CAPS2Q9BXY5 557 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 RTEL1Q9NZ71 1219 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 TBC1D7Q9P0N9 293 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 ANGEL1Q9UNK9 670 aaKnown RBP9.89□□□□□ -0.83
RTN4-206ENST00000394611 SAR1BQ9Y6B6 198 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 GOLGA6L10A0A0M3HER8 536 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 NEURL1BA8MQ27 555 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 CMA1P23946 247 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 TBC1D8BQ0IIM8 1120 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 POLA2Q14181 598 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 BRD3Q15059 726 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 SHC4Q6S5L8 630 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 SYNE4Q8N205 404 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 FUT8Q9BYC5 575 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 KCPQ6ZWJ8 1503 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 GIGYF1O75420 1035 aaPredicted RBP9.89□□□□□ -0.83
RTN4-206ENST00000394611 SKAP2O75563 359 aaPredicted RBP9.89□□□□□ -0.83
RTN4-206ENST00000394611 CPLX4Q7Z7G2 160 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 XAGE2Q96GT9 111 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 AKAP2Q9Y2D5 859 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 MRFAP1Q9Y605 127 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 FAM169AQ9Y6X4 670 aa9.89□□□□□ -0.83
RTN4-206ENST00000394611 PAPPAQ13219 1627 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 KRT86O43790 486 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 ASIC1P78348 528 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 MKRN4PQ13434 485 aaPredicted RBP9.88□□□□□ -0.83
RTN4-206ENST00000394611 CCDC121Q6ZUS5 278 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 CNGA4Q8IV77 575 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 PAIP2Q9BPZ3 127 aaKnown RBP9.88□□□□□ -0.83
RTN4-206ENST00000394611 NACAP1Q9BZK3 213 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 OSBPL5Q9H0X9 879 aaPredicted RBP9.88□□□□□ -0.83
RTN4-206ENST00000394611 GGT7Q9UJ14 662 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 PPP1R12BO60237 982 aaPredicted RBP9.88□□□□□ -0.83
RTN4-206ENST00000394611 C8orf74Q6P047 294 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 KRT26Q7Z3Y9 468 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 CCDC25Q86WR0 208 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 MGARPQ8TDB4 240 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 TAF4BQ92750 862 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 MRRFQ96E11 262 aaKnown RBP9.88□□□□□ -0.83
RTN4-206ENST00000394611 CEP89Q96ST8 783 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 CWC25Q9NXE8 425 aaPredicted RBP9.88□□□□□ -0.83
RTN4-206ENST00000394611 SERPINA10Q9UK55 444 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 STX8Q9UNK0 236 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 LOC102724428A0A0B4J2F2 783 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 STX10O60499 249 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 ATP6V1AP38606 617 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 SIK1P57059 783 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 TADA2BQ86TJ2 420 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 METTL16Q86W50 562 aaKnown RBP9.88□□□□□ -0.83
RTN4-206ENST00000394611 C2CD5Q86YS7 1000 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 REXO1L1PQ8IX06 675 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 DNAJC10Q8IXB1 793 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 CCDC24Q8N4L8 307 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 OXER1Q8TDS5 423 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 KANSL2Q9H9L4 492 aa9.88□□□□□ -0.83
RTN4-206ENST00000394611 TRMT112Q9UI30 125 aaKnown RBP9.88□□□□□ -0.83
RTN4-206ENST00000394611 LRRIQ3A6PVS8 624 aaPredicted RBP9.87□□□□□ -0.83
RTN4-206ENST00000394611 NCK2O43639 380 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 USO1O60763 962 aaKnown RBP9.87□□□□□ -0.83
RTN4-206ENST00000394611 GUCY1A2P33402 732 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 DYMQ7RTS9 669 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 SDR42E1Q8WUS8 393 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 NELFBQ8WX92 580 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 N4BP2L2Q92802 583 aaPredicted RBP9.87□□□□□ -0.83
RTN4-206ENST00000394611 GDAQ9Y2T3 454 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 HEG1Q9ULI3 1381 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 UBR2Q8IWV8 1755 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 C5P01031 1676 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 IGKV5-2P06315 115 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 ATP5JP18859 108 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 MAGEA9P43362 315 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 FXR1P51114 621 aaKnown RBP eCLIP9.87□□□□□ -0.839e-8■■■■□ 20
RTN4-206ENST00000394611 SLC39A14Q15043 492 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 CEP85LQ5SZL2 805 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 LLPHQ9BRT6 129 aaKnown RBP9.87□□□□□ -0.83
RTN4-206ENST00000394611 DDX21Q9NR30 783 aaKnown RBP eCLIP9.87□□□□□ -0.834e-6■■■■□ 21
RTN4-206ENST00000394611 STK38LQ9Y2H1 464 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 PRKAB2O43741 272 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 CLTAP09496 248 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 SNRPA1P09661 255 aaKnown RBP9.87□□□□□ -0.83
RTN4-206ENST00000394611 FDPSP14324 419 aaKnown RBP9.87□□□□□ -0.83
RTN4-206ENST00000394611 IFNAR2P48551 515 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 ITPK1Q13572 414 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 UBE4AQ14139 1066 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 TEX11Q8IYF3 940 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 KAT14Q9H8E8 782 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 CD248Q9HCU0 757 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 PACSIN2Q9UNF0 486 aaPredicted RBP9.87□□□□□ -0.83
RTN4-206ENST00000394611 SALL3Q9BXA9 1300 aa9.87□□□□□ -0.83
RTN4-206ENST00000394611 B4DLN1 442 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 CDC25CP30307 473 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 GUCY1A3Q02108 690 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 GUCY2DQ02846 1103 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 MICAL1Q8TDZ2 1067 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 SYMPKQ92797 1274 aaKnown RBP9.86□□□□□ -0.83
RTN4-206ENST00000394611 CCDC43Q96MW1 224 aaKnown RBP9.86□□□□□ -0.83
RTN4-206ENST00000394611 CEP131Q9UPN4 1083 aa9.86□□□□□ -0.83
RTN4-206ENST00000394611 CYP2D7A0A087X1C5 515 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms