RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 ANKZF1Q9H8Y5 726 aa12.63□□□□□ -0.39
CUX1-204ENST00000393824 AATFQ9NY61 560 aaKnown RBP eCLIP12.63□□□□□ -0.391e-6■■■■■ 27.8
CUX1-204ENST00000393824 ERLIN1O75477 346 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 ZNF202O95125 648 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 SERPINC1P01008 464 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 FGAP02671 866 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 LDHBP07195 334 aaKnown RBP12.62□□□□□ -0.39
CUX1-204ENST00000393824 CT47A1Q5JQC4 288 aaPredicted RBP12.62□□□□□ -0.39
CUX1-204ENST00000393824 CC2D2BQ6DHV5 1058 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 EFCAB13Q8IY85 973 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 EYA3Q99504 573 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 BAG1Q99933 345 aaPredicted RBP12.62□□□□□ -0.39
CUX1-204ENST00000393824 POLR3EQ9NVU0 708 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 TUBE1Q9UJT0 475 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 FAM205AQ6ZU69 1335 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 BIN1O00499 593 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 CUTAO60888 179 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 RAD17O75943 681 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 CCDC172P0C7W6 258 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 SCNN1DP51172 638 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 CHMP4BP1P59074 171 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 HAND2P61296 217 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 MYL5Q02045 173 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 MCM6Q14566 821 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 CFAP100Q494V2 611 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 DACT2Q5SW24 774 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 LRRC31Q6UY01 552 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 STOX1Q6ZVD7 989 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.62□□□□□ -0.396e-12■■■■■ 49.8
CUX1-204ENST00000393824 PODNQ7Z5L7 613 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 FAM71BQ8TC56 605 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 AIDAQ96BJ3 306 aa12.62□□□□□ -0.39
CUX1-204ENST00000393824 GSG1L2A8MUP6 293 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 TUBB2AQ13885 445 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 EP400NLQ6ZTU2 488 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 BRAPQ7Z569 592 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 DZIP1Q86YF9 867 aaKnown RBP12.61□□□□□ -0.39
CUX1-204ENST00000393824 LARGE2Q8N3Y3 721 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 CEP112Q8N8E3 955 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 DRC1Q96MC2 740 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 CEP89Q96ST8 783 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 TUBB2BQ9BVA1 445 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 NBPF3Q9H094 633 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 INCENPQ9NQS7 918 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 FAN1Q9Y2M0 1017 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 G3V3G9 751 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 TUBBP07437 444 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 YBX3P16989 372 aaKnown RBP eCLIP12.61□□□□□ -0.395e-6■■■□□ 19.1
CUX1-204ENST00000393824 PDIA3P30101 505 aaKnown RBP12.61□□□□□ -0.39
CUX1-204ENST00000393824 GSCP56915 257 aaPredicted RBP12.61□□□□□ -0.39
CUX1-204ENST00000393824 DCAF8Q5TAQ9 597 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 MMS22LQ6ZRQ5 1243 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 KIAA0825Q8IV33 1275 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 TAOK3Q9H2K8 898 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 ZBTB12Q9Y330 459 aaPredicted RBP12.61□□□□□ -0.39
CUX1-204ENST00000393824 TACC3Q9Y6A5 838 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 ADAMTSL1Q8N6G6 1762 aa12.61□□□□□ -0.39
CUX1-204ENST00000393824 ZNF646O15015 1829 aaPredicted RBP12.6□□□□□ -0.39
CUX1-204ENST00000393824 PPFIA4O75335 1185 aa12.6□□□□□ -0.39
CUX1-204ENST00000393824 CMA1P23946 247 aa12.6□□□□□ -0.39
CUX1-204ENST00000393824 STK38Q15208 465 aa12.6□□□□□ -0.39
CUX1-204ENST00000393824 SF3A1Q15459 793 aaKnown RBP12.6□□□□□ -0.39
CUX1-204ENST00000393824 SLC4A8Q2Y0W8 1093 aa12.6□□□□□ -0.39
CUX1-204ENST00000393824 CEP120Q8N960 986 aa12.6□□□□□ -0.39
CUX1-204ENST00000393824 MED4Q9NPJ6 270 aa12.6□□□□□ -0.39
CUX1-204ENST00000393824 FER1L6Q2WGJ9 1857 aa12.6□□□□□ -0.39
CUX1-204ENST00000393824 A0A087WUV0 522 aaPredicted RBP12.6□□□□□ -0.39
CUX1-204ENST00000393824 MAGEB6P1A0A0J9YX57 407 aa12.6□□□□□ -0.39
CUX1-204ENST00000393824 SPTLC2O15270 562 aa12.6□□□□□ -0.39
CUX1-204ENST00000393824 N4BP1O75113 896 aaKnown RBP12.6□□□□□ -0.39
CUX1-204ENST00000393824 IARSP41252 1262 aaKnown RBP12.6□□□□□ -0.39
CUX1-204ENST00000393824 MCTP2Q6DN12 878 aa12.6□□□□□ -0.39
CUX1-204ENST00000393824 CCDC12Q8WUD4 166 aaPredicted RBP12.6□□□□□ -0.39
CUX1-204ENST00000393824 TOMM22Q9NS69 142 aa12.6□□□□□ -0.39
CUX1-204ENST00000393824 CDC23Q9UJX2 597 aa12.6□□□□□ -0.39
CUX1-204ENST00000393824 CYP2D7A0A087X1C5 515 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 SHTN1A0MZ66 631 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 TMEM232C9JQI7 657 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 GOLGA8FQ08AF8 430 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 GOLGA8DPQ0D2H9 430 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 HSP90B2PQ58FF3 399 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 TOGARAM2Q6ZUX3 1019 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 CCDC91Q7Z6B0 441 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 TC2NQ8N9U0 490 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 GBP3Q9H0R5 595 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 ABCB6Q9NP58 842 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 TTF2Q9UNY4 1162 aaKnown RBP12.59□□□□□ -0.39
CUX1-204ENST00000393824 CLIC4Q9Y696 253 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 SLC4A4Q9Y6R1 1079 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 E7EWF7 191 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 PSMD14O00487 310 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 FOSBP53539 338 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 CASP8Q14790 479 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 STRIP1Q5VSL9 837 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 TADA2BQ86TJ2 420 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 STK11IPQ8N1F8 1099 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 SH3RF3Q8TEJ3 882 aaPredicted RBP12.59□□□□□ -0.39
CUX1-204ENST00000393824 PNKPQ96T60 521 aa12.59□□□□□ -0.39
CUX1-204ENST00000393824 FAM107BQ9H098 131 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms