RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ERVK-9P63128 1117 aa22.35■■□□□ 1.17
PDLIM7-204ENST00000393546 ERVK-24P63145 666 aa22.35■■□□□ 1.17
PDLIM7-204ENST00000393546 Q3C1V9 767 aa22.35■■□□□ 1.17
PDLIM7-204ENST00000393546 RNF20Q5VTR2 975 aa22.35■■□□□ 1.17
PDLIM7-204ENST00000393546 CREB3L3Q68CJ9 461 aa22.35■■□□□ 1.17
PDLIM7-204ENST00000393546 FBXO46Q6PJ61 603 aaPredicted RBP22.35■■□□□ 1.17
PDLIM7-204ENST00000393546 CCAR1Q8IX12 1150 aaKnown RBP22.35■■□□□ 1.17
PDLIM7-204ENST00000393546 MB21D1Q8N884 522 aa22.35■■□□□ 1.17
PDLIM7-204ENST00000393546 GMCL1Q96IK5 515 aa22.35■■□□□ 1.17
PDLIM7-204ENST00000393546 ZSCAN10Q96SZ4 725 aaPredicted RBP22.35■■□□□ 1.17
PDLIM7-204ENST00000393546 UBAC1Q9BSL1 405 aa22.35■■□□□ 1.17
PDLIM7-204ENST00000393546 PEX10O60683 326 aa22.34■■□□□ 1.17
PDLIM7-204ENST00000393546 MCCP23508 829 aa22.34■■□□□ 1.17
PDLIM7-204ENST00000393546 SLC1A4P43007 532 aa22.34■■□□□ 1.17
PDLIM7-204ENST00000393546 PRMT2P55345 433 aa22.34■■□□□ 1.17
PDLIM7-204ENST00000393546 RCSD1Q6JBY9 416 aa22.34■■□□□ 1.17
PDLIM7-204ENST00000393546 POTEEQ6S8J3 1075 aa22.34■■□□□ 1.17
PDLIM7-204ENST00000393546 ATG4CQ96DT6 458 aa22.34■■□□□ 1.17
PDLIM7-204ENST00000393546 FBXO28Q9NVF7 368 aa22.34■■□□□ 1.17
PDLIM7-204ENST00000393546 FEM1BQ9UK73 627 aa22.34■■□□□ 1.17
PDLIM7-204ENST00000393546 ISY1Q9ULR0 285 aaKnown RBP22.34■■□□□ 1.17
PDLIM7-204ENST00000393546 PTPN22Q9Y2R2 807 aa22.34■■□□□ 1.17
PDLIM7-204ENST00000393546 TAF6LQ9Y6J9 622 aa22.34■■□□□ 1.17
PDLIM7-204ENST00000393546 TNPO2O14787 897 aaKnown RBP22.33■■□□□ 1.17
PDLIM7-204ENST00000393546 CNMDO75829 334 aa22.33■■□□□ 1.17
PDLIM7-204ENST00000393546 REC8O95072 547 aa22.33■■□□□ 1.17
PDLIM7-204ENST00000393546 CCNA1P78396 465 aa22.33■■□□□ 1.17
PDLIM7-204ENST00000393546 PRPF38AQ8NAV1 312 aaKnown RBP22.33■■□□□ 1.17
PDLIM7-204ENST00000393546 ANKS1AQ92625 1134 aa22.33■■□□□ 1.17
PDLIM7-204ENST00000393546 COA7Q96BR5 231 aa22.33■■□□□ 1.17
PDLIM7-204ENST00000393546 SLF1Q9BQI6 1058 aa22.33■■□□□ 1.17
PDLIM7-204ENST00000393546 BTBD7Q9P203 1132 aa22.33■■□□□ 1.17
PDLIM7-204ENST00000393546 PPP1R9AQ9ULJ8 1098 aa22.33■■□□□ 1.17
PDLIM7-204ENST00000393546 MTMR7Q9Y216 660 aa22.33■■□□□ 1.17
PDLIM7-204ENST00000393546 STOX1Q6ZVD7 989 aa22.32■■□□□ 1.16
PDLIM7-204ENST00000393546 CYB5R4Q7L1T6 521 aa22.32■■□□□ 1.16
PDLIM7-204ENST00000393546 CHURC1Q8WUH1 139 aa22.32■■□□□ 1.16
PDLIM7-204ENST00000393546 DCAF4Q8WV16 495 aa22.32■■□□□ 1.16
PDLIM7-204ENST00000393546 CHMP4CQ96CF2 233 aa22.32■■□□□ 1.16
PDLIM7-204ENST00000393546 SRRDQ9UH36 339 aa22.32■■□□□ 1.16
PDLIM7-204ENST00000393546 TNKSO95271 1327 aa22.31■■□□□ 1.16
PDLIM7-204ENST00000393546 RLFQ13129 1914 aa22.31■■□□□ 1.16
PDLIM7-204ENST00000393546 MGAMO43451 1857 aa22.31■■□□□ 1.16
PDLIM7-204ENST00000393546 TMEM232C9JQI7 657 aa22.31■■□□□ 1.16
PDLIM7-204ENST00000393546 MAPK4P31152 587 aa22.31■■□□□ 1.16
PDLIM7-204ENST00000393546 ENAHQ8N8S7 591 aaPredicted RBP22.31■■□□□ 1.16
PDLIM7-204ENST00000393546 KAT14Q9H8E8 782 aa22.31■■□□□ 1.16
PDLIM7-204ENST00000393546 CWC22Q9HCG8 908 aaKnown RBP22.31■■□□□ 1.16
PDLIM7-204ENST00000393546 ADAMTS5Q9UNA0 930 aa22.31■■□□□ 1.16
PDLIM7-204ENST00000393546 ZSWIM8A7E2V4 1837 aa22.3■■□□□ 1.16
PDLIM7-204ENST00000393546 IKQ13123 557 aaPredicted RBP22.3■■□□□ 1.16
PDLIM7-204ENST00000393546 PLS1Q14651 629 aa22.3■■□□□ 1.16
PDLIM7-204ENST00000393546 FAM160B2Q86V87 743 aa22.3■■□□□ 1.16
PDLIM7-204ENST00000393546 KIFC2Q96AC6 838 aa22.3■■□□□ 1.16
PDLIM7-204ENST00000393546 CTDP1Q9Y5B0 961 aaPredicted RBP22.3■■□□□ 1.16
PDLIM7-204ENST00000393546 ERICH2A1L162 156 aa22.29■■□□□ 1.16
PDLIM7-204ENST00000393546 VWA5AO00534 786 aa22.29■■□□□ 1.16
PDLIM7-204ENST00000393546 IFIT3O14879 490 aaKnown RBP22.29■■□□□ 1.16
PDLIM7-204ENST00000393546 PLA2G6O60733 806 aa22.29■■□□□ 1.16
PDLIM7-204ENST00000393546 ZBED4O75132 1171 aa22.29■■□□□ 1.16
PDLIM7-204ENST00000393546 ZKSCAN1P17029 563 aaPredicted RBP22.29■■□□□ 1.16
PDLIM7-204ENST00000393546 STAT2P52630 851 aa22.29■■□□□ 1.16
PDLIM7-204ENST00000393546 SART3Q15020 963 aaKnown RBP22.29■■□□□ 1.16
PDLIM7-204ENST00000393546 CCDC96Q2M329 555 aa22.29■■□□□ 1.16
PDLIM7-204ENST00000393546 IFIT1BQ5T764 474 aaKnown RBP22.29■■□□□ 1.16
PDLIM7-204ENST00000393546 KCTD1Q719H9 257 aa22.29■■□□□ 1.16
PDLIM7-204ENST00000393546 ABHD8Q96I13 439 aa22.29■■□□□ 1.16
PDLIM7-204ENST00000393546 SPATC1LQ9H0A9 340 aa22.29■■□□□ 1.16
PDLIM7-204ENST00000393546 PORCNQ9H237 461 aa22.29■■□□□ 1.16
PDLIM7-204ENST00000393546 FDX1P10109 184 aa22.28■■□□□ 1.16
PDLIM7-204ENST00000393546 MB21D2Q8IYB1 491 aaPredicted RBP22.28■■□□□ 1.16
PDLIM7-204ENST00000393546 PNMA1Q8ND90 353 aa22.28■■□□□ 1.16
PDLIM7-204ENST00000393546 RAET1EQ8TD07 263 aa22.28■■□□□ 1.16
PDLIM7-204ENST00000393546 HPS5Q9UPZ3 1129 aa22.28■■□□□ 1.16
PDLIM7-204ENST00000393546 PTCH2Q9Y6C5 1203 aa22.28■■□□□ 1.16
PDLIM7-204ENST00000393546 PARP14Q460N5 1801 aa22.27■■□□□ 1.16
PDLIM7-204ENST00000393546 PDHBP11177 359 aa22.27■■□□□ 1.16
PDLIM7-204ENST00000393546 MCM5P33992 734 aa22.27■■□□□ 1.16
PDLIM7-204ENST00000393546 PRKCZQ05513 592 aa22.27■■□□□ 1.16
PDLIM7-204ENST00000393546 TMEM132BQ14DG7 1078 aa22.27■■□□□ 1.16
PDLIM7-204ENST00000393546 SEC23AQ15436 765 aa22.27■■□□□ 1.16
PDLIM7-204ENST00000393546 TSGA10IPQ3SY00 556 aa22.27■■□□□ 1.16
PDLIM7-204ENST00000393546 WDR78Q5VTH9 848 aa22.27■■□□□ 1.16
PDLIM7-204ENST00000393546 CHST3Q7LGC8 479 aa22.27■■□□□ 1.16
PDLIM7-204ENST00000393546 PLEKHH3Q7Z736 793 aa22.27■■□□□ 1.16
PDLIM7-204ENST00000393546 DOCK3Q8IZD9 2030 aa22.27■■□□□ 1.16
PDLIM7-204ENST00000393546 MOV10L1Q9BXT6 1211 aaKnown RBP22.27■■□□□ 1.16
PDLIM7-204ENST00000393546 GABRQQ9UN88 632 aa22.27■■□□□ 1.16
PDLIM7-204ENST00000393546 EPB41L2O43491 1005 aaKnown RBP22.26■■□□□ 1.15
PDLIM7-204ENST00000393546 CAPN15O75808 1086 aa22.26■■□□□ 1.15
PDLIM7-204ENST00000393546 STAT3P40763 770 aa22.26■■□□□ 1.15
PDLIM7-204ENST00000393546 FLT3LGP49771 235 aa22.26■■□□□ 1.15
PDLIM7-204ENST00000393546 KRT32Q14532 448 aa22.26■■□□□ 1.15
PDLIM7-204ENST00000393546 GPR142Q7Z601 462 aa22.26■■□□□ 1.15
PDLIM7-204ENST00000393546 SHCBP1Q8NEM2 672 aa22.26■■□□□ 1.15
PDLIM7-204ENST00000393546 GPCPD1Q9NPB8 672 aa22.26■■□□□ 1.15
PDLIM7-204ENST00000393546 SLC25A27O95847 323 aa22.25■■□□□ 1.15
PDLIM7-204ENST00000393546 SNHG28P0DPA3 235 aa22.25■■□□□ 1.15
PDLIM7-204ENST00000393546 ANTXR2P58335 489 aa22.25■■□□□ 1.15
PDLIM7-204ENST00000393546 WTAPQ15007 396 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms