RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 NECTIN1Q15223 517 aa22.8■■□□□ 1.24
GTF3A-201ENST00000381140 POTEEQ6S8J3 1075 aa22.8■■□□□ 1.24
GTF3A-201ENST00000381140 RASGRP2Q7LDG7 609 aa22.8■■□□□ 1.24
GTF3A-201ENST00000381140 GPRC5AQ8NFJ5 357 aa22.8■■□□□ 1.24
GTF3A-201ENST00000381140 ATG4CQ96DT6 458 aa22.8■■□□□ 1.24
GTF3A-201ENST00000381140 TRIM47Q96LD4 638 aa22.8■■□□□ 1.24
GTF3A-201ENST00000381140 ZSCAN10Q96SZ4 725 aaPredicted RBP22.8■■□□□ 1.24
GTF3A-201ENST00000381140 DSG3P32926 999 aa22.79■■□□□ 1.24
GTF3A-201ENST00000381140 NT5C2P49902 561 aa22.79■■□□□ 1.24
GTF3A-201ENST00000381140 FCGRTP55899 365 aa22.79■■□□□ 1.24
GTF3A-201ENST00000381140 CCDC96Q2M329 555 aa22.79■■□□□ 1.24
GTF3A-201ENST00000381140 RNF20Q5VTR2 975 aa22.79■■□□□ 1.24
GTF3A-201ENST00000381140 RCSD1Q6JBY9 416 aa22.79■■□□□ 1.24
GTF3A-201ENST00000381140 MORF4L1Q9UBU8 362 aa22.79■■□□□ 1.24
GTF3A-201ENST00000381140 TNKSO95271 1327 aa22.79■■□□□ 1.24
GTF3A-201ENST00000381140 REC8O95072 547 aa22.78■■□□□ 1.24
GTF3A-201ENST00000381140 BMP3P12645 472 aa22.78■■□□□ 1.24
GTF3A-201ENST00000381140 SLC1A4P43007 532 aa22.78■■□□□ 1.24
GTF3A-201ENST00000381140 NOVP48745 357 aa22.78■■□□□ 1.24
GTF3A-201ENST00000381140 ERVK-9P63128 1117 aa22.78■■□□□ 1.24
GTF3A-201ENST00000381140 ERVK-24P63145 666 aa22.78■■□□□ 1.24
GTF3A-201ENST00000381140 IKQ13123 557 aaPredicted RBP22.78■■□□□ 1.24
GTF3A-201ENST00000381140 CCDC178Q5BJE1 867 aa22.78■■□□□ 1.24
GTF3A-201ENST00000381140 CHST3Q7LGC8 479 aa22.78■■□□□ 1.24
GTF3A-201ENST00000381140 CCAR1Q8IX12 1150 aaKnown RBP22.78■■□□□ 1.24
GTF3A-201ENST00000381140 TTC14Q96N46 770 aa22.78■■□□□ 1.24
GTF3A-201ENST00000381140 RABGAP1Q9Y3P9 1069 aa22.78■■□□□ 1.24
GTF3A-201ENST00000381140 TNPO2O14787 897 aaKnown RBP22.77■■□□□ 1.24
GTF3A-201ENST00000381140 CNMDO75829 334 aa22.77■■□□□ 1.24
GTF3A-201ENST00000381140 PLS1Q14651 629 aa22.77■■□□□ 1.24
GTF3A-201ENST00000381140 Q3C1V9 767 aa22.77■■□□□ 1.24
GTF3A-201ENST00000381140 KCTD1Q719H9 257 aa22.77■■□□□ 1.24
GTF3A-201ENST00000381140 ENAHQ8N8S7 591 aaPredicted RBP22.77■■□□□ 1.24
GTF3A-201ENST00000381140 KIFC2Q96AC6 838 aa22.77■■□□□ 1.24
GTF3A-201ENST00000381140 GMCL1Q96IK5 515 aa22.77■■□□□ 1.24
GTF3A-201ENST00000381140 SLF1Q9BQI6 1058 aa22.77■■□□□ 1.24
GTF3A-201ENST00000381140 BTBD7Q9P203 1132 aa22.77■■□□□ 1.24
GTF3A-201ENST00000381140 TMEM232C9JQI7 657 aa22.76■■□□□ 1.23
GTF3A-201ENST00000381140 WDR78Q5VTH9 848 aa22.76■■□□□ 1.23
GTF3A-201ENST00000381140 LBX2Q6XYB7 198 aa22.76■■□□□ 1.23
GTF3A-201ENST00000381140 DGKHQ86XP1 1220 aa22.76■■□□□ 1.23
GTF3A-201ENST00000381140 KAT14Q9H8E8 782 aa22.76■■□□□ 1.23
GTF3A-201ENST00000381140 CWC22Q9HCG8 908 aaKnown RBP22.76■■□□□ 1.23
GTF3A-201ENST00000381140 PPP1R9AQ9ULJ8 1098 aa22.76■■□□□ 1.23
GTF3A-201ENST00000381140 IFIT3O14879 490 aaKnown RBP22.76■■□□□ 1.23
GTF3A-201ENST00000381140 IFIT1BQ5T764 474 aaKnown RBP22.76■■□□□ 1.23
GTF3A-201ENST00000381140 FEM1BQ9UK73 627 aa22.76■■□□□ 1.23
GTF3A-201ENST00000381140 FRMPD2Q68DX3 1309 aaPredicted RBP22.75■■□□□ 1.23
GTF3A-201ENST00000381140 MYPNQ86TC9 1320 aa22.75■■□□□ 1.23
GTF3A-201ENST00000381140 PLXNB2O15031 1838 aa22.75■■□□□ 1.23
GTF3A-201ENST00000381140 ERICH2A1L162 156 aa22.75■■□□□ 1.23
GTF3A-201ENST00000381140 HOXD10P28358 340 aa22.75■■□□□ 1.23
GTF3A-201ENST00000381140 CCNA1P78396 465 aa22.75■■□□□ 1.23
GTF3A-201ENST00000381140 PKN2Q16513 984 aaKnown RBP22.75■■□□□ 1.23
GTF3A-201ENST00000381140 MB21D2Q8IYB1 491 aaPredicted RBP22.75■■□□□ 1.23
GTF3A-201ENST00000381140 PNMA1Q8ND90 353 aa22.75■■□□□ 1.23
GTF3A-201ENST00000381140 DCAF4Q8WV16 495 aa22.75■■□□□ 1.23
GTF3A-201ENST00000381140 PORCNQ9H237 461 aa22.75■■□□□ 1.23
GTF3A-201ENST00000381140 GPCPD1Q9NPB8 672 aa22.75■■□□□ 1.23
GTF3A-201ENST00000381140 CTDP1Q9Y5B0 961 aaPredicted RBP22.75■■□□□ 1.23
GTF3A-201ENST00000381140 ZKSCAN1P17029 563 aaPredicted RBP22.74■■□□□ 1.23
GTF3A-201ENST00000381140 SART3Q15020 963 aaKnown RBP22.74■■□□□ 1.23
GTF3A-201ENST00000381140 C8orf34Q49A92 452 aa22.74■■□□□ 1.23
GTF3A-201ENST00000381140 FBXO46Q6PJ61 603 aaPredicted RBP22.74■■□□□ 1.23
GTF3A-201ENST00000381140 MB21D1Q8N884 522 aa22.74■■□□□ 1.23
GTF3A-201ENST00000381140 PRPF38AQ8NAV1 312 aaKnown RBP22.74■■□□□ 1.23
GTF3A-201ENST00000381140 COA7Q96BR5 231 aa22.74■■□□□ 1.23
GTF3A-201ENST00000381140 PTPN22Q9Y2R2 807 aa22.74■■□□□ 1.23
GTF3A-201ENST00000381140 VWA5AO00534 786 aa22.73■■□□□ 1.23
GTF3A-201ENST00000381140 PRC1O43663 620 aa22.73■■□□□ 1.23
GTF3A-201ENST00000381140 GNRH1P01148 92 aa22.73■■□□□ 1.23
GTF3A-201ENST00000381140 SLC4A3P48751 1232 aa22.73■■□□□ 1.23
GTF3A-201ENST00000381140 STAT2P52630 851 aa22.73■■□□□ 1.23
GTF3A-201ENST00000381140 ANTXR2P58335 489 aa22.73■■□□□ 1.23
GTF3A-201ENST00000381140 SEC23AQ15436 765 aa22.73■■□□□ 1.23
GTF3A-201ENST00000381140 TMEM67Q5HYA8 995 aa22.73■■□□□ 1.23
GTF3A-201ENST00000381140 RASEFQ8IZ41 740 aa22.73■■□□□ 1.23
GTF3A-201ENST00000381140 BACH2Q9BYV9 841 aa22.73■■□□□ 1.23
GTF3A-201ENST00000381140 SRRDQ9UH36 339 aa22.73■■□□□ 1.23
GTF3A-201ENST00000381140 GABRQQ9UN88 632 aa22.73■■□□□ 1.23
GTF3A-201ENST00000381140 PTCH2Q9Y6C5 1203 aa22.73■■□□□ 1.23
GTF3A-201ENST00000381140 MYH6P13533 1939 aa22.72■■□□□ 1.23
GTF3A-201ENST00000381140 ZNFX1Q9P2E3 1918 aaKnown RBP22.72■■□□□ 1.23
GTF3A-201ENST00000381140 PDHBP11177 359 aa22.72■■□□□ 1.23
GTF3A-201ENST00000381140 PRKCZQ05513 592 aa22.72■■□□□ 1.23
GTF3A-201ENST00000381140 TMEM132BQ14DG7 1078 aa22.72■■□□□ 1.23
GTF3A-201ENST00000381140 WTAPQ15007 396 aa22.72■■□□□ 1.23
GTF3A-201ENST00000381140 TTBK2Q6IQ55 1244 aa22.72■■□□□ 1.23
GTF3A-201ENST00000381140 CHURC1Q8WUH1 139 aa22.72■■□□□ 1.23
GTF3A-201ENST00000381140 ANKS1AQ92625 1134 aa22.72■■□□□ 1.23
GTF3A-201ENST00000381140 SPATC1LQ9H0A9 340 aa22.72■■□□□ 1.23
GTF3A-201ENST00000381140 GOLGA8HP0CJ92 632 aa22.71■■□□□ 1.23
GTF3A-201ENST00000381140 MAPK4P31152 587 aa22.71■■□□□ 1.23
GTF3A-201ENST00000381140 MCM5P33992 734 aa22.71■■□□□ 1.23
GTF3A-201ENST00000381140 SLC16A2P36021 539 aa22.71■■□□□ 1.23
GTF3A-201ENST00000381140 COL9A3Q14050 684 aaPredicted RBP22.71■■□□□ 1.23
GTF3A-201ENST00000381140 FAM160B2Q86V87 743 aa22.71■■□□□ 1.23
GTF3A-201ENST00000381140 CPXCR1Q8N123 301 aa22.71■■□□□ 1.23
GTF3A-201ENST00000381140 RAET1EQ8TD07 263 aa22.71■■□□□ 1.23
GTF3A-201ENST00000381140 MOV10L1Q9BXT6 1211 aaKnown RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms