RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 NUP133Q8WUM0 1156 aa21.97■■□□□ 1.11
SMN2-202ENST00000380742 RPAP3Q9H6T3 665 aaPredicted RBP21.97■■□□□ 1.11
SMN2-202ENST00000380742 AGTPBP1Q9UPW5 1226 aa21.97■■□□□ 1.11
SMN2-202ENST00000380742 CD2BP2O95400 341 aaKnown RBP21.96■■□□□ 1.11
SMN2-202ENST00000380742 SLC1A4P43007 532 aa21.96■■□□□ 1.11
SMN2-202ENST00000380742 GRM4Q14833 912 aa21.96■■□□□ 1.11
SMN2-202ENST00000380742 KCTD1Q719H9 257 aa21.96■■□□□ 1.11
SMN2-202ENST00000380742 NOL8Q76FK4 1167 aaKnown RBP21.96■■□□□ 1.11
SMN2-202ENST00000380742 TPCN1Q9ULQ1 816 aa21.96■■□□□ 1.11
SMN2-202ENST00000380742 FRMPD2Q68DX3 1309 aaPredicted RBP21.95■■□□□ 1.1
SMN2-202ENST00000380742 IGF2BP3O00425 579 aaKnown RBP eCLIP21.95■■□□□ 1.1
SMN2-202ENST00000380742 ZBTB43O43298 467 aa21.95■■□□□ 1.1
SMN2-202ENST00000380742 ST18O60284 1047 aa21.95■■□□□ 1.1
SMN2-202ENST00000380742 GOLGA8HP0CJ92 632 aa21.95■■□□□ 1.1
SMN2-202ENST00000380742 PDIA3P30101 505 aaKnown RBP21.95■■□□□ 1.1
SMN2-202ENST00000380742 TM4SF4P48230 202 aa21.95■■□□□ 1.1
SMN2-202ENST00000380742 INHBEP58166 350 aa21.95■■□□□ 1.1
SMN2-202ENST00000380742 ZNF543Q08ER8 600 aa21.95■■□□□ 1.1
SMN2-202ENST00000380742 SYNE3Q6ZMZ3 975 aa21.95■■□□□ 1.1
SMN2-202ENST00000380742 MICU3Q86XE3 530 aa21.95■■□□□ 1.1
SMN2-202ENST00000380742 CCDC144CPQ8IYA2 1237 aa21.95■■□□□ 1.1
SMN2-202ENST00000380742 FAM43AQ8N2R8 423 aa21.95■■□□□ 1.1
SMN2-202ENST00000380742 NAP1L2Q9ULW6 460 aaPredicted RBP21.95■■□□□ 1.1
SMN2-202ENST00000380742 HPS5Q9UPZ3 1129 aa21.95■■□□□ 1.1
SMN2-202ENST00000380742 COL11A1P12107 1806 aaPredicted RBP21.95■■□□□ 1.1
SMN2-202ENST00000380742 GOLGA8BA8MQT2 603 aa21.94■■□□□ 1.1
SMN2-202ENST00000380742 CALM1P0DP23 149 aa21.94■■□□□ 1.1
SMN2-202ENST00000380742 CALM2P0DP24 149 aa21.94■■□□□ 1.1
SMN2-202ENST00000380742 CALM3P0DP25 149 aa21.94■■□□□ 1.1
SMN2-202ENST00000380742 HOXA7P31268 230 aaPredicted RBP21.94■■□□□ 1.1
SMN2-202ENST00000380742 SREBF2Q12772 1141 aa21.94■■□□□ 1.1
SMN2-202ENST00000380742 CCDC96Q2M329 555 aa21.94■■□□□ 1.1
SMN2-202ENST00000380742 TTBK2Q6IQ55 1244 aa21.94■■□□□ 1.1
SMN2-202ENST00000380742 CATSPERGQ6ZRH7 1159 aa21.94■■□□□ 1.1
SMN2-202ENST00000380742 ANKRD23Q86SG2 305 aa21.94■■□□□ 1.1
SMN2-202ENST00000380742 STAG2Q8N3U4 1231 aa21.94■■□□□ 1.1
SMN2-202ENST00000380742 IL27Q8NEV9 243 aa21.94■■□□□ 1.1
SMN2-202ENST00000380742 ZNF274Q96GC6 653 aaPredicted RBP21.94■■□□□ 1.1
SMN2-202ENST00000380742 MAP3K14Q99558 947 aa21.94■■□□□ 1.1
SMN2-202ENST00000380742 TANGO6Q9C0B7 1094 aa21.94■■□□□ 1.1
SMN2-202ENST00000380742 GPCPD1Q9NPB8 672 aa21.94■■□□□ 1.1
SMN2-202ENST00000380742 MAD2L2Q9UI95 211 aa21.94■■□□□ 1.1
SMN2-202ENST00000380742 PALM3A6NDB9 673 aaPredicted RBP21.93■■□□□ 1.1
SMN2-202ENST00000380742 USP17L15C9J2P7 530 aa21.93■■□□□ 1.1
SMN2-202ENST00000380742 USP17L13C9JLJ4 530 aa21.93■■□□□ 1.1
SMN2-202ENST00000380742 USP17L11C9JVI0 530 aa21.93■■□□□ 1.1
SMN2-202ENST00000380742 USP17L18D6R9N7 530 aa21.93■■□□□ 1.1
SMN2-202ENST00000380742 USP17L22D6RA61 530 aa21.93■■□□□ 1.1
SMN2-202ENST00000380742 USP17L17D6RBQ6 530 aa21.93■■□□□ 1.1
SMN2-202ENST00000380742 USP17L19D6RCP7 530 aa21.93■■□□□ 1.1
SMN2-202ENST00000380742 USP17L20D6RJB6 530 aa21.93■■□□□ 1.1
SMN2-202ENST00000380742 PARP1P09874 1014 aaKnown RBP21.93■■□□□ 1.1
SMN2-202ENST00000380742 MAP2K2P36507 400 aa21.93■■□□□ 1.1
SMN2-202ENST00000380742 USP17L24Q0WX57 530 aa21.93■■□□□ 1.1
SMN2-202ENST00000380742 IFNL1Q8IU54 200 aa21.93■■□□□ 1.1
SMN2-202ENST00000380742 FANCBQ8NB91 859 aa21.93■■□□□ 1.1
SMN2-202ENST00000380742 FBXO28Q9NVF7 368 aa21.93■■□□□ 1.1
SMN2-202ENST00000380742 TMEM232C9JQI7 657 aa21.92■■□□□ 1.1
SMN2-202ENST00000380742 PDHXO00330 501 aa21.92■■□□□ 1.1
SMN2-202ENST00000380742 LARGE1O95461 756 aa21.92■■□□□ 1.1
SMN2-202ENST00000380742 RCAN1P53805 252 aa21.92■■□□□ 1.1
SMN2-202ENST00000380742 ASPRV1Q53RT3 343 aa21.92■■□□□ 1.1
SMN2-202ENST00000380742 GPATCH4Q5T3I0 446 aaKnown RBP21.92■■□□□ 1.1
SMN2-202ENST00000380742 DNAJC5GQ8N7S2 189 aa21.92■■□□□ 1.1
SMN2-202ENST00000380742 FAM217BQ9NTX9 383 aaPredicted RBP21.92■■□□□ 1.1
SMN2-202ENST00000380742 ISY1Q9ULR0 285 aaKnown RBP21.92■■□□□ 1.1
SMN2-202ENST00000380742 SLC45A1Q9Y2W3 748 aa21.92■■□□□ 1.1
SMN2-202ENST00000380742 MYH6P13533 1939 aa21.92■■□□□ 1.1
SMN2-202ENST00000380742 NID2Q14112 1375 aa21.92■■□□□ 1.1
SMN2-202ENST00000380742 BAZ2BQ9UIF8 2168 aaKnown RBP21.92■■□□□ 1.1
SMN2-202ENST00000380742 CEP350Q5VT06 3117 aa21.92■■□□□ 1.1
SMN2-202ENST00000380742 GOLGA8AA7E2F4 631 aa21.91■■□□□ 1.1
SMN2-202ENST00000380742 METAP2P50579 478 aaKnown RBP eCLIP21.91■■□□□ 1.1
SMN2-202ENST00000380742 STK3Q13188 491 aa21.91■■□□□ 1.1
SMN2-202ENST00000380742 PABPC4Q13310 644 aaKnown RBP eCLIP21.91■■□□□ 1.1
SMN2-202ENST00000380742 ME3Q16798 604 aa21.91■■□□□ 1.1
SMN2-202ENST00000380742 REM2Q8IYK8 340 aaPredicted RBP21.91■■□□□ 1.1
SMN2-202ENST00000380742 CTCFLQ8NI51 663 aaPredicted RBP21.91■■□□□ 1.1
SMN2-202ENST00000380742 ASCC2Q9H1I8 757 aaPredicted RBP21.91■■□□□ 1.1
SMN2-202ENST00000380742 CPVLQ9H3G5 476 aa21.91■■□□□ 1.1
SMN2-202ENST00000380742 LIMCH1Q9UPQ0 1083 aa21.91■■□□□ 1.1
SMN2-202ENST00000380742 A0A0G2JMZ2 1700 aa21.9■■□□□ 1.1
SMN2-202ENST00000380742 FLOT1O75955 427 aa21.9■■□□□ 1.1
SMN2-202ENST00000380742 CDC27P30260 824 aa21.9■■□□□ 1.1
SMN2-202ENST00000380742 SLC16A2P36021 539 aa21.9■■□□□ 1.1
SMN2-202ENST00000380742 CCT2P78371 535 aaKnown RBP21.9■■□□□ 1.1
SMN2-202ENST00000380742 RTN1Q16799 776 aa21.9■■□□□ 1.1
SMN2-202ENST00000380742 BTNL9Q6UXG8 535 aa21.9■■□□□ 1.1
SMN2-202ENST00000380742 UBA5Q9GZZ9 404 aa21.9■■□□□ 1.1
SMN2-202ENST00000380742 FEM1BQ9UK73 627 aa21.9■■□□□ 1.1
SMN2-202ENST00000380742 KLRF2D3W0D1 207 aa21.89■■□□□ 1.1
SMN2-202ENST00000380742 PLA2G6O60733 806 aa21.89■■□□□ 1.1
SMN2-202ENST00000380742 OSBPP22059 807 aa21.89■■□□□ 1.1
SMN2-202ENST00000380742 KIF5BP33176 963 aa21.89■■□□□ 1.1
SMN2-202ENST00000380742 STAT2P52630 851 aa21.89■■□□□ 1.1
SMN2-202ENST00000380742 COG2Q14746 738 aa21.89■■□□□ 1.1
SMN2-202ENST00000380742 NBPF11Q86T75 865 aa21.89■■□□□ 1.1
SMN2-202ENST00000380742 P2RX7Q99572 595 aaKnown RBP21.89■■□□□ 1.1
SMN2-202ENST00000380742 NCOA5Q9HCD5 579 aaKnown RBP21.89■■□□□ 1.1
SMN2-202ENST00000380742 ZCCHC17Q9NP64 241 aaKnown RBP21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms