RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 BRIP1Q9BX63 1249 aa14.59□□□□□ -0.07
USP11-204ENST00000377107 GLI3P10071 1580 aa14.58□□□□□ -0.07
USP11-204ENST00000377107 TMEM139Q8IV31 216 aa14.58□□□□□ -0.07
USP11-204ENST00000377107 HPS3Q969F9 1004 aa14.58□□□□□ -0.07
USP11-204ENST00000377107 DRC1Q96MC2 740 aa14.58□□□□□ -0.07
USP11-204ENST00000377107 GSDMAQ96QA5 445 aa14.58□□□□□ -0.07
USP11-204ENST00000377107 CTAGE1Q96RT6 745 aa14.58□□□□□ -0.07
USP11-204ENST00000377107 ARFGAP3Q9NP61 516 aa14.58□□□□□ -0.07
USP11-204ENST00000377107 XDHP47989 1333 aa14.58□□□□□ -0.07
USP11-204ENST00000377107 CNTNAP5Q8WYK1 1306 aa14.58□□□□□ -0.07
USP11-204ENST00000377107 LAMB4A4D0S4 1761 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 GOLGA6L9A6NEM1 432 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 CCNT1O60563 726 aaKnown RBP14.58□□□□□ -0.08
USP11-204ENST00000377107 TADA3O75528 432 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 RFC4P35249 363 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 ENOX2Q16206 610 aaKnown RBP14.58□□□□□ -0.08
USP11-204ENST00000377107 WWC2Q6AWC2 1192 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 USP17L2Q6R6M4 530 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 GDAP1L1Q96MZ0 367 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 PARD6BQ9BYG5 372 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 FAM205AQ6ZU69 1335 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 FAM237AA0A1B0GTK4 181 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 PPP1R3GB7ZBB8 358 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 BMP15O95972 392 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 PRCPP42785 496 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 DNA2P51530 1060 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 CHMP4BP1P59074 171 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 ASIC1P78348 528 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 GRIK5Q16478 980 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 SOGA3Q5TF21 947 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 TRIM10Q9UDY6 481 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 ABCC6O95255 1503 aa14.58□□□□□ -0.08
USP11-204ENST00000377107 PARP4Q9UKK3 1724 aaKnown RBP14.58□□□□□ -0.08
USP11-204ENST00000377107 C6orf229H3BNL8 230 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 COPB1P53618 953 aaKnown RBP14.57□□□□□ -0.08
USP11-204ENST00000377107 KIAA1328Q86T90 577 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 GOLGA1Q92805 767 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 TMEM60Q9H2L4 133 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 CCNL1Q9UK58 526 aaPredicted RBP14.57□□□□□ -0.08
USP11-204ENST00000377107 AKAP11Q9UKA4 1901 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 A0A1B0GTH6 734 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 EFCAB8A8MWE9 144 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 DDAH1O94760 285 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 TRIM21P19474 475 aaKnown RBP14.57□□□□□ -0.08
USP11-204ENST00000377107 MTIF2P46199 727 aaKnown RBP14.57□□□□□ -0.08
USP11-204ENST00000377107 NFIXQ14938 502 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 CCDC93Q567U6 631 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 CHP1Q99653 195 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 BIN2Q9UBW5 565 aaPredicted RBP14.57□□□□□ -0.08
USP11-204ENST00000377107 ADD3Q9UEY8 706 aaKnown RBP14.57□□□□□ -0.08
USP11-204ENST00000377107 RTCBQ9Y3I0 505 aaKnown RBP14.57□□□□□ -0.08
USP11-204ENST00000377107 ADGRG1Q9Y653 693 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 SPATA31A1Q5TZJ5 1347 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 RIMBP2O15034 1052 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 TECP42680 631 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 TXKP42681 527 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 FUT2Q10981 343 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 STIM1Q13586 685 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 PPP2R5BQ15173 497 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 TERF2Q15554 542 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 SAMD1Q6SPF0 538 aaPredicted RBP14.57□□□□□ -0.08
USP11-204ENST00000377107 CNGA4Q8IV77 575 aa14.57□□□□□ -0.08
USP11-204ENST00000377107 FRMPD2Q68DX3 1309 aaPredicted RBP14.56□□□□□ -0.08
USP11-204ENST00000377107 NUP188Q5SRE5 1749 aa14.56□□□□□ -0.08
USP11-204ENST00000377107 CTAGE9A4FU28 777 aa14.56□□□□□ -0.08
USP11-204ENST00000377107 MFAP3LO75121 409 aa14.56□□□□□ -0.08
USP11-204ENST00000377107 GYPCP04921 128 aa14.56□□□□□ -0.08
USP11-204ENST00000377107 CALML3P27482 149 aa14.56□□□□□ -0.08
USP11-204ENST00000377107 ATP2C1P98194 919 aaPredicted RBP14.56□□□□□ -0.08
USP11-204ENST00000377107 IL17AQ16552 155 aa14.56□□□□□ -0.08
USP11-204ENST00000377107 DYMQ7RTS9 669 aa14.56□□□□□ -0.08
USP11-204ENST00000377107 KLRF2D3W0D1 207 aa14.56□□□□□ -0.08
USP11-204ENST00000377107 RNF225M0QZC1 329 aaPredicted RBP14.56□□□□□ -0.08
USP11-204ENST00000377107 IPO7O95373 1038 aaKnown RBP14.56□□□□□ -0.08
USP11-204ENST00000377107 TYW1BQ6NUM6 668 aa14.56□□□□□ -0.08
USP11-204ENST00000377107 CAGE1Q8TC20 777 aa14.56□□□□□ -0.08
USP11-204ENST00000377107 ZHX3Q9H4I2 956 aa14.56□□□□□ -0.08
USP11-204ENST00000377107 TCP11L1Q9NUJ3 509 aa14.56□□□□□ -0.08
USP11-204ENST00000377107 BAG3O95817 575 aa14.55□□□□□ -0.08
USP11-204ENST00000377107 TBX2Q13207 712 aaPredicted RBP14.55□□□□□ -0.08
USP11-204ENST00000377107 PFKFB3Q16875 520 aaPredicted RBP14.55□□□□□ -0.08
USP11-204ENST00000377107 CLEC10AQ8IUN9 316 aa14.55□□□□□ -0.08
USP11-204ENST00000377107 NEK11Q8NG66 645 aa14.55□□□□□ -0.08
USP11-204ENST00000377107 ATP8A2Q9NTI2 1148 aa14.55□□□□□ -0.08
USP11-204ENST00000377107 ARPP21Q9UBL0 812 aaPredicted RBP14.55□□□□□ -0.08
USP11-204ENST00000377107 MAPK8IP2Q13387 824 aaPredicted RBP14.55□□□□□ -0.08
USP11-204ENST00000377107 CDK5RAP3Q96JB5 506 aa14.55□□□□□ -0.08
USP11-204ENST00000377107 FAM170AA1A519 330 aa14.55□□□□□ -0.08
USP11-204ENST00000377107 B4DLN1 442 aa14.55□□□□□ -0.08
USP11-204ENST00000377107 GTPBP6O43824 516 aaPredicted RBP14.55□□□□□ -0.08
USP11-204ENST00000377107 TNNT3P45378 269 aaPredicted RBP14.55□□□□□ -0.08
USP11-204ENST00000377107 FAM193AP78312 1265 aa14.55□□□□□ -0.08
USP11-204ENST00000377107 PDE4DQ08499 809 aa14.55□□□□□ -0.08
USP11-204ENST00000377107 FKBP15Q5T1M5 1219 aa14.55□□□□□ -0.08
USP11-204ENST00000377107 TEX11Q8IYF3 940 aa14.55□□□□□ -0.08
USP11-204ENST00000377107 CSGALNACT2Q8N6G5 542 aa14.55□□□□□ -0.08
USP11-204ENST00000377107 CCDC102AQ96A19 550 aa14.55□□□□□ -0.08
USP11-204ENST00000377107 PSMB7Q99436 277 aa14.55□□□□□ -0.08
USP11-204ENST00000377107 TANGO6Q9C0B7 1094 aa14.55□□□□□ -0.08
USP11-204ENST00000377107 SEC63Q9UGP8 760 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms