RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 MICU3Q86XE3 530 aa15.37■□□□□ 0.05
TIMP1-202ENST00000377017 TANGO6Q9C0B7 1094 aa15.37■□□□□ 0.05
TIMP1-202ENST00000377017 PNMA3Q9UL41 463 aa15.37■□□□□ 0.05
TIMP1-202ENST00000377017 WDR33Q9C0J8 1336 aaKnown RBP15.37■□□□□ 0.05
TIMP1-202ENST00000377017 CCDC196A0A1B0GTZ2 297 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 GOLGA8AA7E2F4 631 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 USP17L15C9J2P7 530 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 USP17L13C9JLJ4 530 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 USP17L11C9JVI0 530 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 USP17L18D6R9N7 530 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 USP17L22D6RA61 530 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 USP17L17D6RBQ6 530 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 USP17L19D6RCP7 530 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 USP17L20D6RJB6 530 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 OSBPP22059 807 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 MAP2K2P36507 400 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 GNAQP50148 359 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 METAP2P50579 478 aaKnown RBP eCLIP15.36■□□□□ 0.056e-10■□□□□ 10.7
TIMP1-202ENST00000377017 EVCP57679 992 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 HTRA3P83110 453 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 ZNF543Q08ER8 600 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 USP17L24Q0WX57 530 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 GRM4Q14833 912 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 FAM83BQ5T0W9 1011 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 ANKRD23Q86SG2 305 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 BRI3BPQ8WY22 251 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 CHMP4CQ96CF2 233 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 ZNF274Q96GC6 653 aaPredicted RBP15.36■□□□□ 0.05
TIMP1-202ENST00000377017 RPAP3Q9H6T3 665 aaPredicted RBP15.36■□□□□ 0.05
TIMP1-202ENST00000377017 ZCCHC17Q9NP64 241 aaKnown RBP15.36■□□□□ 0.05
TIMP1-202ENST00000377017 RBM28Q9NW13 759 aaKnown RBP15.36■□□□□ 0.05
TIMP1-202ENST00000377017 BRPF3Q9ULD4 1205 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 LIMCH1Q9UPQ0 1083 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 SLC45A1Q9Y2W3 748 aa15.36■□□□□ 0.05
TIMP1-202ENST00000377017 HOXA7P31268 230 aaPredicted RBP15.35■□□□□ 0.05
TIMP1-202ENST00000377017 VEGFBP49765 207 aa15.35■□□□□ 0.05
TIMP1-202ENST00000377017 STAT2P52630 851 aa15.35■□□□□ 0.05
TIMP1-202ENST00000377017 IRX3P78415 501 aaPredicted RBP15.35■□□□□ 0.05
TIMP1-202ENST00000377017 KIF23Q02241 960 aaPredicted RBP15.35■□□□□ 0.05
TIMP1-202ENST00000377017 IKQ13123 557 aaPredicted RBP15.35■□□□□ 0.05
TIMP1-202ENST00000377017 DGKZQ13574 1117 aa15.35■□□□□ 0.05
TIMP1-202ENST00000377017 RTN1Q16799 776 aa15.35■□□□□ 0.05
TIMP1-202ENST00000377017 KIAA1755Q5JYT7 1200 aa15.35■□□□□ 0.05
TIMP1-202ENST00000377017 NOL8Q76FK4 1167 aaKnown RBP15.35■□□□□ 0.05
TIMP1-202ENST00000377017 FAM160B2Q86V87 743 aa15.35■□□□□ 0.05
TIMP1-202ENST00000377017 CHURC1Q8WUH1 139 aa15.35■□□□□ 0.05
TIMP1-202ENST00000377017 ZSCAN31Q96LW9 406 aaPredicted RBP15.35■□□□□ 0.05
TIMP1-202ENST00000377017 MYL10Q9BUA6 226 aa15.35■□□□□ 0.05
TIMP1-202ENST00000377017 FEM1BQ9UK73 627 aa15.35■□□□□ 0.05
TIMP1-202ENST00000377017 NID2Q14112 1375 aa15.35■□□□□ 0.05
TIMP1-202ENST00000377017 TMEM232C9JQI7 657 aa15.34■□□□□ 0.05
TIMP1-202ENST00000377017 PDIA3P30101 505 aaKnown RBP15.34■□□□□ 0.05
TIMP1-202ENST00000377017 TM4SF4P48230 202 aa15.34■□□□□ 0.05
TIMP1-202ENST00000377017 MOGSQ13724 837 aa15.34■□□□□ 0.05
TIMP1-202ENST00000377017 TREML2Q5T2D2 321 aa15.34■□□□□ 0.05
TIMP1-202ENST00000377017 KCTD1Q719H9 257 aa15.34■□□□□ 0.05
TIMP1-202ENST00000377017 FANCBQ8NB91 859 aa15.34■□□□□ 0.05
TIMP1-202ENST00000377017 NUP88Q99567 741 aaPredicted RBP15.34■□□□□ 0.05
TIMP1-202ENST00000377017 LZTS2Q9BRK4 669 aa15.34■□□□□ 0.05
TIMP1-202ENST00000377017 SLKQ9H2G2 1235 aaPredicted RBP15.34■□□□□ 0.05
TIMP1-202ENST00000377017 SH2B1Q9NRF2 756 aaPredicted RBP15.34■□□□□ 0.05
TIMP1-202ENST00000377017 THSD7BQ9C0I4 1608 aa15.34■□□□□ 0.05
TIMP1-202ENST00000377017 FRMPD2Q68DX3 1309 aaPredicted RBP15.34■□□□□ 0.05
TIMP1-202ENST00000377017 MYPNQ86TC9 1320 aa15.34■□□□□ 0.05
TIMP1-202ENST00000377017 BTBD19C9JJ37 291 aa15.33■□□□□ 0.04
TIMP1-202ENST00000377017 PDHXO00330 501 aa15.33■□□□□ 0.04
TIMP1-202ENST00000377017 DHX16O60231 1041 aaKnown RBP15.33■□□□□ 0.04
TIMP1-202ENST00000377017 PLA2G6O60733 806 aa15.33■□□□□ 0.04
TIMP1-202ENST00000377017 AOC2O75106 756 aa15.33■□□□□ 0.04
TIMP1-202ENST00000377017 FLOT1O75955 427 aa15.33■□□□□ 0.04
TIMP1-202ENST00000377017 ALDH1A1P00352 501 aa15.33■□□□□ 0.04
TIMP1-202ENST00000377017 RXRAP19793 462 aa15.33■□□□□ 0.04
TIMP1-202ENST00000377017 GPAT2Q6NUI2 795 aa15.33■□□□□ 0.04
TIMP1-202ENST00000377017 CPLX2Q6PUV4 134 aaKnown RBP15.33■□□□□ 0.04
TIMP1-202ENST00000377017 CATSPERGQ6ZRH7 1159 aa15.33■□□□□ 0.04
TIMP1-202ENST00000377017 IFNL1Q8IU54 200 aa15.33■□□□□ 0.04
TIMP1-202ENST00000377017 CCDC144CPQ8IYA2 1237 aa15.33■□□□□ 0.04
TIMP1-202ENST00000377017 GTF3C2Q8WUA4 911 aaPredicted RBP15.33■□□□□ 0.04
TIMP1-202ENST00000377017 PARK7Q99497 189 aaKnown RBP15.33■□□□□ 0.04
TIMP1-202ENST00000377017 LARP6Q9BRS8 491 aaKnown RBP15.33■□□□□ 0.04
TIMP1-202ENST00000377017 GPCPD1Q9NPB8 672 aa15.33■□□□□ 0.04
TIMP1-202ENST00000377017 MAD2L2Q9UI95 211 aa15.33■□□□□ 0.04
TIMP1-202ENST00000377017 TPCN1Q9ULQ1 816 aa15.33■□□□□ 0.04
TIMP1-202ENST00000377017 PALM3A6NDB9 673 aaPredicted RBP15.32■□□□□ 0.04
TIMP1-202ENST00000377017 KLRF2D3W0D1 207 aa15.32■□□□□ 0.04
TIMP1-202ENST00000377017 CPLX1O14810 134 aa15.32■□□□□ 0.04
TIMP1-202ENST00000377017 GOLGA8HP0CJ92 632 aa15.32■□□□□ 0.04
TIMP1-202ENST00000377017 FDX1P10109 184 aa15.32■□□□□ 0.04
TIMP1-202ENST00000377017 COG2Q14746 738 aa15.32■□□□□ 0.04
TIMP1-202ENST00000377017 RASGRP2Q7LDG7 609 aa15.32■□□□□ 0.04
TIMP1-202ENST00000377017 RAB11FIP4Q86YS3 637 aa15.32■□□□□ 0.04
TIMP1-202ENST00000377017 HSCBQ8IWL3 235 aa15.32■□□□□ 0.04
TIMP1-202ENST00000377017 PRPF38AQ8NAV1 312 aaKnown RBP15.32■□□□□ 0.04
TIMP1-202ENST00000377017 SLF1Q9BQI6 1058 aa15.32■□□□□ 0.04
TIMP1-202ENST00000377017 HOXC10Q9NYD6 342 aa15.32■□□□□ 0.04
TIMP1-202ENST00000377017 CTDP1Q9Y5B0 961 aaPredicted RBP15.32■□□□□ 0.04
TIMP1-202ENST00000377017 PARP14Q460N5 1801 aa15.31■□□□□ 0.04
TIMP1-202ENST00000377017 PFKFB2O60825 505 aa15.31■□□□□ 0.04
TIMP1-202ENST00000377017 SMARCA1P28370 1054 aa15.31■□□□□ 0.04
TIMP1-202ENST00000377017 STK3Q13188 491 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms