RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 TFRCP02786 760 aaKnown RBP13.16□□□□□ -0.3
DDR1-227ENST00000376570 CHRNA5P30532 468 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 AXDND1Q5T1B0 1012 aaPredicted RBP13.16□□□□□ -0.3
DDR1-227ENST00000376570 TTBK2Q6IQ55 1244 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 KRT222Q8N1A0 295 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 CALML4Q96GE6 196 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 ABCC12Q96J65 1359 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 AFF2P51816 1311 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 CDHR2Q9BYE9 1310 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 KIF5CO60282 957 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 ZMYND10O75800 440 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 MMP10P09238 476 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 CASP14P31944 242 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 USP8P40818 1118 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 FOXP4Q8IVH2 680 aaPredicted RBP13.16□□□□□ -0.3
DDR1-227ENST00000376570 CCDC150Q8NCX0 1101 aa13.16□□□□□ -0.3
DDR1-227ENST00000376570 FAM217BQ9NTX9 383 aaPredicted RBP13.16□□□□□ -0.3
DDR1-227ENST00000376570 ARMCX5Q6P1M9 558 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 RDH13Q8NBN7 331 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 SH2D3AQ9BRG2 576 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 KCNQ5Q9NR82 932 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 PCDHAC2Q9Y5I4 1007 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 CCDC66A2RUB6 948 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 RPS6KA4O75676 772 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 SLU7O95391 586 aaKnown RBP13.15□□□□□ -0.3
DDR1-227ENST00000376570 TOB1P50616 345 aaPredicted RBP13.15□□□□□ -0.3
DDR1-227ENST00000376570 LLGL1Q15334 1064 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 CDCA7Q9BWT1 371 aaPredicted RBP13.15□□□□□ -0.3
DDR1-227ENST00000376570 NARFQ9UHQ1 456 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 PARP3Q9Y6F1 533 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 AKAP12Q02952 1782 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 HLA-DOAP06340 250 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 LIFRP42702 1097 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 SF3A3Q12874 501 aaKnown RBP eCLIP13.15□□□□□ -0.39e-7■■■■□ 24.7
DDR1-227ENST00000376570 TMCO3Q6UWJ1 677 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 CSGALNACT2Q8N6G5 542 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 CEP95Q96GE4 821 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 RBM17Q96I25 401 aaKnown RBP13.15□□□□□ -0.3
DDR1-227ENST00000376570 ZNF287Q9HBT7 754 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
DDR1-227ENST00000376570 POTEMA6NI47 508 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 ZSCAN12O43309 604 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 SLC1A4P43007 532 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 GSTO1P78417 241 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 WDR78Q5VTH9 848 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 VGLL2Q8N8G2 317 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 ENGASEQ8NFI3 743 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 STAG1Q8WVM7 1258 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 TMEM47Q9BQJ4 181 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 C6orf50Q9HD87 102 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 A0A1W2PQ27 194 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 A0A1W2PQ64 194 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 A0A1W2PQD8 194 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 USP17L15C9J2P7 530 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 USP17L13C9JLJ4 530 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 USP17L11C9JVI0 530 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 USP17L18D6R9N7 530 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 USP17L22D6RA61 530 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 USP17L17D6RBQ6 530 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 USP17L19D6RCP7 530 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 USP17L20D6RJB6 530 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 ADAMTS3O15072 1205 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 CFBP00751 764 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 HOXA13P31271 388 aaPredicted RBP13.14□□□□□ -0.31
DDR1-227ENST00000376570 NCBP1Q09161 790 aaKnown RBP13.14□□□□□ -0.31
DDR1-227ENST00000376570 USP17L24Q0WX57 530 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 USP17L6PQ6QN14 398 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 SNX29Q8TEQ0 813 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 CD209Q9NNX6 404 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 ZSCAN20P17040 1043 aaPredicted RBP13.14□□□□□ -0.31
DDR1-227ENST00000376570 CDK8P49336 464 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 EVCP57679 992 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 TBC1D8BQ0IIM8 1120 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 TOGARAM2Q6ZUX3 1019 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 PAXBP1Q9Y5B6 917 aa13.14□□□□□ -0.31
DDR1-227ENST00000376570 TCRBV5S4A2TA0A5A2 114 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 AKR1B15C9JRZ8 316 aaPredicted RBP13.13□□□□□ -0.31
DDR1-227ENST00000376570 AKR1B10O60218 316 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 RBL2Q08999 1139 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 DNAJC21Q5F1R6 531 aaKnown RBP13.13□□□□□ -0.31
DDR1-227ENST00000376570 CABP7Q86V35 215 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 TBCKQ8TEA7 893 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 PPP1R13BQ96KQ4 1090 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 CAVIN2O95810 425 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 HSPA1LP34931 641 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 CYP27A1Q02318 531 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 PLA2G4DQ86XP0 818 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 PAGE5Q96GU1 130 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 GTPBP4Q9BZE4 634 aaKnown RBP13.13□□□□□ -0.31
DDR1-227ENST00000376570 OGFRQ9NZT2 677 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 LRWD1Q9UFC0 647 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 NALCNQ8IZF0 1738 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 FGFR2P21802 821 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 TMEM266Q2M3C6 531 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 SHROOM1Q2M3G4 852 aaPredicted RBP13.13□□□□□ -0.31
DDR1-227ENST00000376570 ZFYVE27Q5T4F4 411 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 NCAPH2Q6IBW4 605 aa13.13□□□□□ -0.31
DDR1-227ENST00000376570 TRAF5O00463 557 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 PSMA7O14818 248 aa13.12□□□□□ -0.31
DDR1-227ENST00000376570 DCAF17Q5H9S7 520 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms