RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 NDUFAB1O14561 156 aa16.27■□□□□ 0.19
NOTCH4-201ENST00000375023 PEX26Q7Z412 305 aa16.27■□□□□ 0.19
NOTCH4-201ENST00000375023 SMC5Q8IY18 1101 aa16.27■□□□□ 0.19
NOTCH4-201ENST00000375023 NSMCE1Q8WV22 266 aa16.27■□□□□ 0.19
NOTCH4-201ENST00000375023 USP17L12C9JPN9 530 aa16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 USP17L21D6R901 530 aa16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 CLCN1P35523 988 aa16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 NLRP12P59046 1061 aa16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 SFMBT2Q5VUG0 894 aa16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 PRPF31Q8WWY3 499 aaKnown RBP16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 ACTN4O43707 911 aaKnown RBP16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 CHAMP1Q96JM3 812 aa16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 SH2D4BQ5SQS7 431 aa16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 DEPTORQ8TB45 409 aa16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 NAP1L4Q99733 375 aaKnown RBP16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 FAM114A2Q9NRY5 505 aa16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 OATP04181 439 aa16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 ATF7P17544 494 aaPredicted RBP16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 PPARAQ07869 468 aa16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 VWA3BQ502W6 1294 aa16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 TSC1Q92574 1164 aa16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 NLRX1Q86UT6 975 aa16.26■□□□□ 0.19
NOTCH4-201ENST00000375023 TTC19Q6DKK2 380 aaPredicted RBP16.25■□□□□ 0.19
NOTCH4-201ENST00000375023 MCUR1Q96AQ8 359 aa16.25■□□□□ 0.19
NOTCH4-201ENST00000375023 PDE1CQ14123 709 aaPredicted RBP16.25■□□□□ 0.19
NOTCH4-201ENST00000375023 CHMP6Q96FZ7 201 aa16.25■□□□□ 0.19
NOTCH4-201ENST00000375023 RTEL1Q9NZ71 1219 aa16.25■□□□□ 0.19
NOTCH4-201ENST00000375023 CUTAO60888 179 aa16.25■□□□□ 0.19
NOTCH4-201ENST00000375023 TACO1Q9BSH4 297 aaKnown RBP16.25■□□□□ 0.19
NOTCH4-201ENST00000375023 KDRP35968 1356 aa16.25■□□□□ 0.19
NOTCH4-201ENST00000375023 PHLDB2Q86SQ0 1253 aa16.25■□□□□ 0.19
NOTCH4-201ENST00000375023 ZNF75DP51815 510 aa16.25■□□□□ 0.19
NOTCH4-201ENST00000375023 PSMD2Q13200 908 aa16.25■□□□□ 0.19
NOTCH4-201ENST00000375023 NAA35Q5VZE5 725 aa16.25■□□□□ 0.19
NOTCH4-201ENST00000375023 EEPD1Q7L9B9 569 aa16.25■□□□□ 0.19
NOTCH4-201ENST00000375023 CLIC6Q96NY7 704 aa16.25■□□□□ 0.19
NOTCH4-201ENST00000375023 TMEM106CQ9BVX2 250 aa16.25■□□□□ 0.19
NOTCH4-201ENST00000375023 FAM184BQ9ULE4 1060 aa16.25■□□□□ 0.19
NOTCH4-201ENST00000375023 KIAA1841Q6NSI8 718 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 RSAD2Q8WXG1 361 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 CUL7Q14999 1698 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 ATP5DP30049 168 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 CYP4A11Q02928 519 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 PARP10Q53GL7 1025 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 PNMA8AQ86V59 439 aaPredicted RBP16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 PPFIBP2Q8ND30 876 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 CCDC127Q96BQ5 260 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 CAPN9O14815 690 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 SARNPP82979 210 aaKnown RBP16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 POLA2Q14181 598 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 VSIG1Q86XK7 387 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 SPDYE2BA6NHP3 402 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 K7ENM7 598 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 SPDYE6P0CI01 402 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 XKR9Q5GH70 373 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 SND1Q7KZF4 910 aaKnown RBP eCLIP16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 IFT20Q8IY31 132 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 SUPT20HQ8NEM7 779 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 PGBD1Q96JS3 809 aa16.24■□□□□ 0.19
NOTCH4-201ENST00000375023 BCRP11274 1271 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 REXO1Q8N1G1 1221 aaKnown RBP16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 ZNF653Q96CK0 615 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 CCDC94Q9BW85 323 aaPredicted RBP16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 DPH5Q9H2P9 285 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 RAD50Q92878 1312 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 GOLGA8FQ08AF8 430 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 GOLGA8DPQ0D2H9 430 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 TTLL7Q6ZT98 887 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 ZNF496Q96IT1 587 aaPredicted RBP16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 SCYL1Q96KG9 808 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 ASXL2Q76L83 1435 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 GCKRQ14397 625 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 RPS6KA1Q15418 735 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 KRT25Q7Z3Z0 450 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 ZNF467Q7Z7K2 595 aaPredicted RBP16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 SLC39A2Q9NP94 309 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 LIG4P49917 911 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 SLC12A2P55011 1212 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 ADCY1Q08828 1119 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 ME3Q16798 604 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 A2MP01023 1474 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 PDE6BP35913 854 aa16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 INTS4Q96HW7 963 aaKnown RBP16.23■□□□□ 0.19
NOTCH4-201ENST00000375023 RAD17O75943 681 aa16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 NME8Q8N427 588 aa16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 PTPN22Q9Y2R2 807 aa16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 KCNK3O14649 394 aa16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 PALM2Q8IXS6 379 aa16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 ANKRD35Q8N283 1001 aa16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 KBTBD3Q8NAB2 608 aa16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 TRPM2O94759 1503 aa16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 CACNB1Q02641 598 aaPredicted RBP16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 PTH1RQ03431 593 aa16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 LRRC24Q50LG9 513 aa16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 GBP6Q6ZN66 633 aa16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 IFIH1Q9BYX4 1025 aaKnown RBP16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 SMYD2Q9NRG4 433 aa16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 CTSWP56202 376 aa16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 CCDC62Q6P9F0 684 aa16.22■□□□□ 0.19
NOTCH4-201ENST00000375023 ARFGAP2Q8N6H7 521 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms