RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 PPP4R3BQ5MIZ7 849 aa14.42□□□□□ -0.1
PRPF4-202ENST00000374199 KRBA2Q6ZNG9 492 aa14.42□□□□□ -0.1
PRPF4-202ENST00000374199 CLIC6Q96NY7 704 aa14.42□□□□□ -0.1
PRPF4-202ENST00000374199 CABP5Q9NP86 173 aa14.42□□□□□ -0.1
PRPF4-202ENST00000374199 ANO10Q9NW15 660 aa14.42□□□□□ -0.1
PRPF4-202ENST00000374199 CCDC39Q9UFE4 941 aa14.42□□□□□ -0.1
PRPF4-202ENST00000374199 PGAP2Q9UHJ9 254 aa14.42□□□□□ -0.1
PRPF4-202ENST00000374199 ADCY5O95622 1261 aa14.42□□□□□ -0.1
PRPF4-202ENST00000374199 AKR1B1P15121 316 aa14.42□□□□□ -0.1
PRPF4-202ENST00000374199 BAG6P46379 1132 aa14.42□□□□□ -0.1
PRPF4-202ENST00000374199 NLRP12P59046 1061 aa14.42□□□□□ -0.1
PRPF4-202ENST00000374199 CCDC17Q96LX7 622 aa14.42□□□□□ -0.1
PRPF4-202ENST00000374199 TMX4Q9H1E5 349 aaPredicted RBP14.42□□□□□ -0.1
PRPF4-202ENST00000374199 HSD3B7Q9H2F3 369 aa14.42□□□□□ -0.1
PRPF4-202ENST00000374199 KCNH3Q9ULD8 1083 aa14.42□□□□□ -0.1
PRPF4-202ENST00000374199 PCDHA6Q9UN73 950 aa14.42□□□□□ -0.1
PRPF4-202ENST00000374199 PCDHA8Q9Y5H6 950 aa14.42□□□□□ -0.1
PRPF4-202ENST00000374199 TRIM75PA6NK02 468 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 SYKP43405 635 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 ZNF165P49910 485 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 MMP14P50281 582 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 NCAPHQ15003 741 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 E2F4Q16254 413 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 IL17AQ16552 155 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 AOC3Q16853 763 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 PPP1R18Q6NYC8 613 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 LUZP1Q86V48 1076 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 FOXP4Q8IVH2 680 aaPredicted RBP14.41□□□□□ -0.1
PRPF4-202ENST00000374199 ZFPM1Q8IX07 1006 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 BLIDQ8IZY5 108 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 DNAJC25Q9H1X3 360 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 ZKSCAN5Q9Y2L8 839 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 DICER1Q9UPY3 1922 aaKnown RBP14.41□□□□□ -0.1
PRPF4-202ENST00000374199 SIAH1Q8IUQ4 282 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 CCDC82Q8N4S0 544 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 SGIP1Q9BQI5 828 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 BRMS1Q9HCU9 246 aa14.41□□□□□ -0.1
PRPF4-202ENST00000374199 PAPPA2Q9BXP8 1791 aa14.4□□□□□ -0.1
PRPF4-202ENST00000374199 TTLL1O95922 423 aa14.4□□□□□ -0.1
PRPF4-202ENST00000374199 TGFB2P61812 414 aa14.4□□□□□ -0.1
PRPF4-202ENST00000374199 MAP3K10Q02779 954 aa14.4□□□□□ -0.1
PRPF4-202ENST00000374199 LONRF3Q496Y0 759 aa14.4□□□□□ -0.1
PRPF4-202ENST00000374199 CCDC93Q567U6 631 aa14.4□□□□□ -0.1
PRPF4-202ENST00000374199 FKBP1CQ5VVH2 108 aa14.4□□□□□ -0.1
PRPF4-202ENST00000374199 CCDC148Q8NFR7 591 aa14.4□□□□□ -0.1
PRPF4-202ENST00000374199 KLRF2D3W0D1 207 aa14.4□□□□□ -0.1
PRPF4-202ENST00000374199 IKBKBO14920 756 aa14.4□□□□□ -0.1
PRPF4-202ENST00000374199 PARP1P09874 1014 aaKnown RBP14.4□□□□□ -0.1
PRPF4-202ENST00000374199 CLK2P49760 499 aaKnown RBP14.4□□□□□ -0.1
PRPF4-202ENST00000374199 TTLL6Q8N841 843 aa14.4□□□□□ -0.1
PRPF4-202ENST00000374199 NYAP2Q9P242 653 aa14.4□□□□□ -0.1
PRPF4-202ENST00000374199 CNTNAP1P78357 1384 aa14.4□□□□□ -0.1
PRPF4-202ENST00000374199 PRPHP41219 470 aa14.39□□□□□ -0.11
PRPF4-202ENST00000374199 SCNN1DP51172 638 aa14.39□□□□□ -0.11
PRPF4-202ENST00000374199 TTC38Q5R3I4 469 aa14.39□□□□□ -0.11
PRPF4-202ENST00000374199 PCDHAC2Q9Y5I4 1007 aa14.39□□□□□ -0.11
PRPF4-202ENST00000374199 PARP14Q460N5 1801 aa14.39□□□□□ -0.11
PRPF4-202ENST00000374199 A0A087X0B3 334 aa14.39□□□□□ -0.11
PRPF4-202ENST00000374199 hCG_1642624A0A1W2PR95 340 aa14.39□□□□□ -0.11
PRPF4-202ENST00000374199 EDIL3O43854 480 aa14.39□□□□□ -0.11
PRPF4-202ENST00000374199 ZNF543Q08ER8 600 aa14.39□□□□□ -0.11
PRPF4-202ENST00000374199 GNL2Q13823 731 aaKnown RBP14.39□□□□□ -0.11
PRPF4-202ENST00000374199 CT47A1Q5JQC4 288 aaPredicted RBP14.39□□□□□ -0.11
PRPF4-202ENST00000374199 MRFAP1L1Q96HT8 127 aa14.39□□□□□ -0.11
PRPF4-202ENST00000374199 CSRNP2Q9H175 543 aa14.39□□□□□ -0.11
PRPF4-202ENST00000374199 DDTLA6NHG4 134 aaPredicted RBP14.39□□□□□ -0.11
PRPF4-202ENST00000374199 LAD1O00515 517 aa14.39□□□□□ -0.11
PRPF4-202ENST00000374199 RSBN1LQ6PCB5 846 aaPredicted RBP14.39□□□□□ -0.11
PRPF4-202ENST00000374199 RASGRP2Q7LDG7 609 aa14.39□□□□□ -0.11
PRPF4-202ENST00000374199 GMCL1P1Q8NEA9 526 aa14.39□□□□□ -0.11
PRPF4-202ENST00000374199 PI4KBQ9UBF8 816 aa14.39□□□□□ -0.11
PRPF4-202ENST00000374199 RBBP6Q7Z6E9 1792 aaKnown RBP14.38□□□□□ -0.11
PRPF4-202ENST00000374199 USP17L5A8MUK1 530 aa14.38□□□□□ -0.11
PRPF4-202ENST00000374199 MYO1BO43795 1136 aa14.38□□□□□ -0.11
PRPF4-202ENST00000374199 BMP6P22004 513 aa14.38□□□□□ -0.11
PRPF4-202ENST00000374199 SOGA3Q5TF21 947 aa14.38□□□□□ -0.11
PRPF4-202ENST00000374199 LTBP3Q9NS15 1303 aa14.38□□□□□ -0.11
PRPF4-202ENST00000374199 ZNF75DP51815 510 aa14.38□□□□□ -0.11
PRPF4-202ENST00000374199 SLC4A8Q2Y0W8 1093 aa14.38□□□□□ -0.11
PRPF4-202ENST00000374199 DPCR1Q3MIW9 517 aa14.38□□□□□ -0.11
PRPF4-202ENST00000374199 TRIML1Q8N9V2 468 aa14.38□□□□□ -0.11
PRPF4-202ENST00000374199 TEX2Q8IWB9 1127 aa14.37□□□□□ -0.11
PRPF4-202ENST00000374199 SPDYE2BA6NHP3 402 aa14.37□□□□□ -0.11
PRPF4-202ENST00000374199 HLA-DOAP06340 250 aa14.37□□□□□ -0.11
PRPF4-202ENST00000374199 SPDYE6P0CI01 402 aa14.37□□□□□ -0.11
PRPF4-202ENST00000374199 MORC3Q14149 939 aa14.37□□□□□ -0.11
PRPF4-202ENST00000374199 MYH7BA7E2Y1 1941 aa14.37□□□□□ -0.11
PRPF4-202ENST00000374199 LOC285556D6RIA3 1793 aa14.37□□□□□ -0.11
PRPF4-202ENST00000374199 DPEP1P16444 411 aa14.37□□□□□ -0.11
PRPF4-202ENST00000374199 KANK3Q6NY19 840 aa14.37□□□□□ -0.11
PRPF4-202ENST00000374199 TRIM44Q96DX7 344 aaPredicted RBP14.37□□□□□ -0.11
PRPF4-202ENST00000374199 STX8Q9UNK0 236 aa14.37□□□□□ -0.11
PRPF4-202ENST00000374199 TBC1D12O60347 775 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 NLRP5P59047 1200 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 PDXDC2PQ6P474 469 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 USP17L2Q6R6M4 530 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 CEP57L1Q8IYX8 460 aa14.36□□□□□ -0.11
PRPF4-202ENST00000374199 GPKOWQ92917 476 aaPredicted RBP eCLIP14.36□□□□□ -0.11
PRPF4-202ENST00000374199 BAZ2BQ9UIF8 2168 aaKnown RBP14.36□□□□□ -0.11
PRPF4-202ENST00000374199 F8W031 263 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms