RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 USP17L11C9JVI0 530 aa15.25■□□□□ 0.03
HDAC8-204ENST00000373560 USP17L18D6R9N7 530 aa15.25■□□□□ 0.03
HDAC8-204ENST00000373560 USP17L22D6RA61 530 aa15.25■□□□□ 0.03
HDAC8-204ENST00000373560 USP17L17D6RBQ6 530 aa15.25■□□□□ 0.03
HDAC8-204ENST00000373560 USP17L19D6RCP7 530 aa15.25■□□□□ 0.03
HDAC8-204ENST00000373560 USP17L20D6RJB6 530 aa15.25■□□□□ 0.03
HDAC8-204ENST00000373560 CYP2C18P33260 490 aa15.25■□□□□ 0.03
HDAC8-204ENST00000373560 ACLYP53396 1101 aa15.25■□□□□ 0.03
HDAC8-204ENST00000373560 USP17L24Q0WX57 530 aa15.25■□□□□ 0.03
HDAC8-204ENST00000373560 CCDC102BQ68D86 513 aa15.25■□□□□ 0.03
HDAC8-204ENST00000373560 OTOP2Q7RTS6 562 aa15.25■□□□□ 0.03
HDAC8-204ENST00000373560 SPRED2Q7Z698 418 aa15.25■□□□□ 0.03
HDAC8-204ENST00000373560 SH3RF3Q8TEJ3 882 aaPredicted RBP15.25■□□□□ 0.03
HDAC8-204ENST00000373560 COG5Q9UP83 839 aa15.25■□□□□ 0.03
HDAC8-204ENST00000373560 ROBO3Q96MS0 1386 aa15.24■□□□□ 0.03
HDAC8-204ENST00000373560 SEMA3EO15041 775 aa15.24■□□□□ 0.03
HDAC8-204ENST00000373560 RARBP10826 455 aa15.24■□□□□ 0.03
HDAC8-204ENST00000373560 PI16Q6UXB8 463 aa15.24■□□□□ 0.03
HDAC8-204ENST00000373560 LBX2Q6XYB7 198 aa15.24■□□□□ 0.03
HDAC8-204ENST00000373560 RNF180Q86T96 592 aa15.24■□□□□ 0.03
HDAC8-204ENST00000373560 TEX11Q8IYF3 940 aa15.24■□□□□ 0.03
HDAC8-204ENST00000373560 HLA-CQ95604 372 aa15.24■□□□□ 0.03
HDAC8-204ENST00000373560 VWCEQ96DN2 955 aa15.24■□□□□ 0.03
HDAC8-204ENST00000373560 SIL1Q9H173 461 aa15.24■□□□□ 0.03
HDAC8-204ENST00000373560 IL23AQ9NPF7 189 aa15.24■□□□□ 0.03
HDAC8-204ENST00000373560 COL11A1P12107 1806 aaPredicted RBP15.24■□□□□ 0.03
HDAC8-204ENST00000373560 SYNRGQ9UMZ2 1314 aa15.23■□□□□ 0.03
HDAC8-204ENST00000373560 ERCC3P19447 782 aa15.23■□□□□ 0.03
HDAC8-204ENST00000373560 POU3F3P20264 500 aaPredicted RBP15.23■□□□□ 0.03
HDAC8-204ENST00000373560 ACER1Q8TDN7 264 aa15.23■□□□□ 0.03
HDAC8-204ENST00000373560 GNL3LQ9NVN8 582 aaKnown RBP15.23■□□□□ 0.03
HDAC8-204ENST00000373560 PTPRSQ13332 1948 aa15.23■□□□□ 0.03
HDAC8-204ENST00000373560 GH2P01242 217 aa15.22■□□□□ 0.03
HDAC8-204ENST00000373560 CA3P07451 260 aa15.22■□□□□ 0.03
HDAC8-204ENST00000373560 CDK7P50613 346 aa15.22■□□□□ 0.03
HDAC8-204ENST00000373560 EXOSC9Q06265 439 aaKnown RBP15.22■□□□□ 0.03
HDAC8-204ENST00000373560 CCSAPQ6IQ19 270 aaPredicted RBP15.22■□□□□ 0.03
HDAC8-204ENST00000373560 TBC1D9Q6ZT07 1266 aa15.22■□□□□ 0.03
HDAC8-204ENST00000373560 TMEM199Q8N511 208 aa15.22■□□□□ 0.03
HDAC8-204ENST00000373560 ZGPATQ8N5A5 531 aaKnown RBP15.22■□□□□ 0.03
HDAC8-204ENST00000373560 CDCA7LQ96GN5 454 aa15.22■□□□□ 0.03
HDAC8-204ENST00000373560 FEZ1Q99689 392 aa15.22■□□□□ 0.03
HDAC8-204ENST00000373560 RPAP3Q9H6T3 665 aaPredicted RBP15.22■□□□□ 0.03
HDAC8-204ENST00000373560 PI4KBQ9UBF8 816 aa15.22■□□□□ 0.03
HDAC8-204ENST00000373560 SCN5AQ14524 2016 aa15.21■□□□□ 0.03
HDAC8-204ENST00000373560 MYO5AQ9Y4I1 1855 aaKnown RBP15.21■□□□□ 0.03
HDAC8-204ENST00000373560 ZNF865P0CJ78 1059 aaPredicted RBP15.21■□□□□ 0.03
HDAC8-204ENST00000373560 CCDC174Q6PII3 467 aa15.21■□□□□ 0.03
HDAC8-204ENST00000373560 METTL16Q86W50 562 aaKnown RBP15.21■□□□□ 0.03
HDAC8-204ENST00000373560 MAPKAPK5Q8IW41 473 aa15.21■□□□□ 0.03
HDAC8-204ENST00000373560 WWC1Q8IX03 1113 aa15.21■□□□□ 0.03
HDAC8-204ENST00000373560 SLF2Q8IX21 1173 aa15.21■□□□□ 0.03
HDAC8-204ENST00000373560 FAM126BQ8IXS8 530 aa15.21■□□□□ 0.03
HDAC8-204ENST00000373560 PDCD7Q8N8D1 485 aaKnown RBP15.21■□□□□ 0.03
HDAC8-204ENST00000373560 KLHDC9Q8NEP7 349 aa15.21■□□□□ 0.03
HDAC8-204ENST00000373560 NSUN4Q96CB9 384 aaKnown RBP15.21■□□□□ 0.03
HDAC8-204ENST00000373560 MFRPQ9BY79 579 aa15.21■□□□□ 0.03
HDAC8-204ENST00000373560 FLT1P17948 1338 aa15.2■□□□□ 0.02
HDAC8-204ENST00000373560 MYH1P12882 1939 aa15.2■□□□□ 0.02
HDAC8-204ENST00000373560 FGBP02675 491 aa15.2■□□□□ 0.02
HDAC8-204ENST00000373560 KCNA10Q16322 511 aa15.2■□□□□ 0.02
HDAC8-204ENST00000373560 ERICH6Q7L0X2 663 aa15.2■□□□□ 0.02
HDAC8-204ENST00000373560 FAM178BQ8IXR5 827 aa15.2■□□□□ 0.02
HDAC8-204ENST00000373560 GJD3Q8N144 294 aa15.2■□□□□ 0.02
HDAC8-204ENST00000373560 SPATC1LQ9H0A9 340 aa15.2■□□□□ 0.02
HDAC8-204ENST00000373560 PALD1Q9ULE6 856 aa15.2■□□□□ 0.02
HDAC8-204ENST00000373560 PCDHA11Q9Y5I1 949 aa15.2■□□□□ 0.02
HDAC8-204ENST00000373560 PDS5AQ29RF7 1337 aaKnown RBP15.19■□□□□ 0.02
HDAC8-204ENST00000373560 ADCY6O43306 1168 aa15.19■□□□□ 0.02
HDAC8-204ENST00000373560 GTPBP6O43824 516 aaPredicted RBP15.19■□□□□ 0.02
HDAC8-204ENST00000373560 LPXNO60711 386 aa15.19■□□□□ 0.02
HDAC8-204ENST00000373560 PGK2P07205 417 aa15.19■□□□□ 0.02
HDAC8-204ENST00000373560 IL9P15248 144 aa15.19■□□□□ 0.02
HDAC8-204ENST00000373560 PRSS33Q8NF86 280 aa15.19■□□□□ 0.02
HDAC8-204ENST00000373560 SAP30BPQ9UHR5 308 aaKnown RBP15.19■□□□□ 0.02
HDAC8-204ENST00000373560 ZDBF2Q9HCK1 2354 aa15.19■□□□□ 0.02
HDAC8-204ENST00000373560 CCL23P55773 120 aa15.18■□□□□ 0.02
HDAC8-204ENST00000373560 GRB10Q13322 594 aa15.18■□□□□ 0.02
HDAC8-204ENST00000373560 CSPP1Q1MSJ5 1256 aa15.18■□□□□ 0.02
HDAC8-204ENST00000373560 HFE2Q6ZVN8 426 aa15.18■□□□□ 0.02
HDAC8-204ENST00000373560 CRACR2BQ8N4Y2 399 aaPredicted RBP15.18■□□□□ 0.02
HDAC8-204ENST00000373560 ARNTL2Q8WYA1 636 aa15.18■□□□□ 0.02
HDAC8-204ENST00000373560 TSEN34Q9BSV6 310 aaKnown RBP15.18■□□□□ 0.02
HDAC8-204ENST00000373560 WNT8AQ9H1J5 351 aa15.18■□□□□ 0.02
HDAC8-204ENST00000373560 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.18■□□□□ 0.02
HDAC8-204ENST00000373560 C5orf42Q9H799 3197 aa15.18■□□□□ 0.02
HDAC8-204ENST00000373560 RBAK-RBAKDNI3L0D1 243 aa15.17■□□□□ 0.02
HDAC8-204ENST00000373560 STRNO43815 780 aa15.17■□□□□ 0.02
HDAC8-204ENST00000373560 ST18O60284 1047 aa15.17■□□□□ 0.02
HDAC8-204ENST00000373560 AKR1A1P14550 325 aa15.17■□□□□ 0.02
HDAC8-204ENST00000373560 SPTY2D1Q68D10 685 aaPredicted RBP15.17■□□□□ 0.02
HDAC8-204ENST00000373560 NCAPG2Q86XI2 1143 aa15.17■□□□□ 0.02
HDAC8-204ENST00000373560 SHCBP1Q8NEM2 672 aa15.17■□□□□ 0.02
HDAC8-204ENST00000373560 TGFBRAP1Q8WUH2 860 aa15.17■□□□□ 0.02
HDAC8-204ENST00000373560 NUP133Q8WUM0 1156 aa15.17■□□□□ 0.02
HDAC8-204ENST00000373560 KIAA1683Q9H0B3 1180 aa15.17■□□□□ 0.02
HDAC8-204ENST00000373560 PA2G4Q9UQ80 394 aaKnown RBP15.17■□□□□ 0.02
HDAC8-204ENST00000373560 MCM3APO60318 1980 aa15.16■□□□□ 0.02
HDAC8-204ENST00000373560 MOXD2PA6NHM9 499 aa15.16■□□□□ 0.02
HDAC8-204ENST00000373560 ZBBXA8MT70 800 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms