RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 PSMB7Q99436 277 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 TRIM37O94972 964 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 MYOCDQ8IZQ8 938 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 SLC52A2Q9HAB3 445 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 PPARAQ07869 468 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 BSPRYQ5W0U4 402 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 PHLDB3Q6NSJ2 640 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 C2CD5Q86YS7 1000 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 HOMER3Q9NSC5 361 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 DDX41Q9UJV9 622 aaKnown RBP12.7□□□□□ -0.38
VCL-202ENST00000372755 NOC2LQ9Y3T9 749 aaKnown RBP12.7□□□□□ -0.38
VCL-202ENST00000372755 IGSF3O75054 1194 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 ZNF445P59923 1031 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 GCKRQ14397 625 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 FAM102BQ5T8I3 360 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 GPBP1Q86WP2 473 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 BEGAINQ9BUH8 593 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 PNMA2Q9UL42 364 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 OAS2P29728 719 aaKnown RBP12.69□□□□□ -0.38
VCL-202ENST00000372755 CTNNA1P35221 906 aaKnown RBP12.69□□□□□ -0.38
VCL-202ENST00000372755 ANKRD42Q8N9B4 389 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 SUCLG2Q96I99 432 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 SERTAD1Q9UHV2 236 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 ZNF518AQ6AHZ1 1483 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 LRMPQ12912 555 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 BRD3Q15059 726 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 SLFN12Q8IYM2 578 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 MYRIPQ8NFW9 859 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 ST7Q9NRC1 585 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 KLHL14Q9P2G3 628 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 HYOU1Q9Y4L1 999 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 MGEA5O60502 916 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 STMN1P16949 149 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 RBBP5Q15291 538 aaKnown RBP12.69□□□□□ -0.38
VCL-202ENST00000372755 NLRC4Q9NPP4 1024 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 GOLGA8CPA6NN73 597 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 GOLGA8KD6RF30 607 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 ZAP70P43403 619 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 TCP10Q12799 353 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 VPS54Q9P1Q0 977 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 KCNJ18B7U540 433 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 E7EWF7 191 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 LIG4P49917 911 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 KCNJ12Q14500 433 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 CCDC13Q8IYE1 715 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 KLHDC4Q8TBB5 520 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 MLXIPQ9HAP2 919 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 C1orf112Q9NSG2 853 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 TYW1Q9NV66 732 aaKnown RBP12.69□□□□□ -0.38
VCL-202ENST00000372755 TNFAIP1Q13829 316 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 ARHGEF16Q5VV41 709 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 CDC37L1Q7L3B6 337 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 BBOF1Q8ND07 529 aa12.69□□□□□ -0.38
VCL-202ENST00000372755 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.69□□□□□ -0.38
VCL-202ENST00000372755 PALM3A6NDB9 673 aaPredicted RBP12.68□□□□□ -0.38
VCL-202ENST00000372755 CAPN9O14815 690 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 ADCY8P40145 1251 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 FNBP4Q8N3X1 1017 aaPredicted RBP12.68□□□□□ -0.38
VCL-202ENST00000372755 OR8K1Q8NGG5 319 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 UBE2Q2Q8WVN8 375 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 CYP2J2P51589 502 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 FAM71BQ8TC56 605 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 SMCR8Q8TEV9 937 aaPredicted RBP12.68□□□□□ -0.38
VCL-202ENST00000372755 CSRNP1Q96S65 589 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 PDE6CP51160 858 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 PNOCQ13519 176 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 FAM173BQ6P4H8 233 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 TRMT44Q8IYL2 757 aaKnown RBP12.68□□□□□ -0.38
VCL-202ENST00000372755 MGARPQ8TDB4 240 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 TM6SF1Q9BZW5 370 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 PSDA5PKW4 1024 aaPredicted RBP12.68□□□□□ -0.38
VCL-202ENST00000372755 KRIT1O00522 736 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 SH3BGRP55822 239 aaPredicted RBP12.68□□□□□ -0.38
VCL-202ENST00000372755 USP40Q9NVE5 1235 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 MRPL11Q9Y3B7 192 aaKnown RBP12.68□□□□□ -0.38
VCL-202ENST00000372755 ADALQ6DHV7 355 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 RDH13Q8NBN7 331 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 OTUD7AQ8TE49 926 aaPredicted RBP12.68□□□□□ -0.38
VCL-202ENST00000372755 ADPGKQ9BRR6 497 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 RTEL1Q9NZ71 1219 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 FAN1Q9Y2M0 1017 aa12.68□□□□□ -0.38
VCL-202ENST00000372755 MORC3Q14149 939 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 GALNT17Q6IS24 598 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 SCYL2Q6P3W7 929 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 ARHGAP4P98171 946 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 PRKG1Q13976 671 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 SPATS2Q86XZ4 545 aaKnown RBP12.67□□□□□ -0.38
VCL-202ENST00000372755 BLIDQ8IZY5 108 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 DDX27Q96GQ7 796 aaKnown RBP12.67□□□□□ -0.38
VCL-202ENST00000372755 Q9H521 79 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 RABEP2Q9H5N1 569 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 HESX1Q9UBX0 185 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 CSADQ9Y600 493 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 ARHGAP42A6NI28 874 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 SEC24BO95487 1268 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 ATP5JP18859 108 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 GARSP41250 739 aaKnown RBP12.67□□□□□ -0.38
VCL-202ENST00000372755 MCF2L2Q86YR7 1114 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 ZNF654Q8IZM8 581 aa12.67□□□□□ -0.38
VCL-202ENST00000372755 METTL13Q8N6R0 699 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms