RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 ACER1Q8TDN7 264 aa18.6■□□□□ 0.57
C9orf78-201ENST00000372447 CCDC102AQ96A19 550 aa18.6■□□□□ 0.57
C9orf78-201ENST00000372447 WDR18Q9BV38 432 aa18.6■□□□□ 0.57
C9orf78-201ENST00000372447 SCAND2PQ9GZW5 306 aaPredicted RBP18.6■□□□□ 0.57
C9orf78-201ENST00000372447 ELP1O95163 1332 aa18.59■□□□□ 0.57
C9orf78-201ENST00000372447 A0A1W2PRG0 241 aa18.59■□□□□ 0.57
C9orf78-201ENST00000372447 TRIM75PA6NK02 468 aa18.59■□□□□ 0.57
C9orf78-201ENST00000372447 SH2B2O14492 632 aaPredicted RBP18.59■□□□□ 0.57
C9orf78-201ENST00000372447 EEF2P13639 858 aaKnown RBP18.59■□□□□ 0.57
C9orf78-201ENST00000372447 GRM1Q13255 1194 aa18.59■□□□□ 0.57
C9orf78-201ENST00000372447 PPIL2Q13356 520 aa18.59■□□□□ 0.57
C9orf78-201ENST00000372447 TMEM87BQ96K49 555 aa18.59■□□□□ 0.57
C9orf78-201ENST00000372447 AS3MTQ9HBK9 375 aa18.59■□□□□ 0.57
C9orf78-201ENST00000372447 GREB1LQ9C091 1923 aaPredicted RBP18.58■□□□□ 0.57
C9orf78-201ENST00000372447 ZBTB48P10074 688 aaPredicted RBP18.58■□□□□ 0.57
C9orf78-201ENST00000372447 ECE1P42892 770 aa18.58■□□□□ 0.57
C9orf78-201ENST00000372447 NASPP49321 788 aaPredicted RBP18.58■□□□□ 0.57
C9orf78-201ENST00000372447 CCDC183Q5T5S1 534 aa18.58■□□□□ 0.57
C9orf78-201ENST00000372447 IQCA1Q86XH1 822 aa18.58■□□□□ 0.57
C9orf78-201ENST00000372447 CLIP2Q9UDT6 1046 aa18.58■□□□□ 0.57
C9orf78-201ENST00000372447 KCNH4Q9UQ05 1017 aa18.58■□□□□ 0.57
C9orf78-201ENST00000372447 FDPSP14324 419 aaKnown RBP18.58■□□□□ 0.56
C9orf78-201ENST00000372447 ATP2B2Q01814 1243 aa18.58■□□□□ 0.56
C9orf78-201ENST00000372447 CAPNS2Q96L46 248 aa18.58■□□□□ 0.56
C9orf78-201ENST00000372447 ZSCAN10Q96SZ4 725 aaPredicted RBP18.58■□□□□ 0.56
C9orf78-201ENST00000372447 NYAP2Q9P242 653 aa18.58■□□□□ 0.56
C9orf78-201ENST00000372447 STX8Q9UNK0 236 aa18.58■□□□□ 0.56
C9orf78-201ENST00000372447 USP17L10C9JJH3 530 aa18.57■□□□□ 0.56
C9orf78-201ENST00000372447 TTLL1O95922 423 aa18.57■□□□□ 0.56
C9orf78-201ENST00000372447 NOVP48745 357 aa18.57■□□□□ 0.56
C9orf78-201ENST00000372447 RCSD1Q6JBY9 416 aa18.57■□□□□ 0.56
C9orf78-201ENST00000372447 IGDCC4Q8TDY8 1250 aa18.57■□□□□ 0.56
C9orf78-201ENST00000372447 ZIC5Q96T25 663 aa18.57■□□□□ 0.56
C9orf78-201ENST00000372447 RBSNQ9H1K0 784 aa18.57■□□□□ 0.56
C9orf78-201ENST00000372447 CXCL11O14625 94 aa18.56■□□□□ 0.56
C9orf78-201ENST00000372447 CPLX1O14810 134 aa18.56■□□□□ 0.56
C9orf78-201ENST00000372447 BACE1P56817 501 aa18.56■□□□□ 0.56
C9orf78-201ENST00000372447 MTMR2Q13614 643 aa18.56■□□□□ 0.56
C9orf78-201ENST00000372447 TPRNQ4KMQ1 711 aa18.56■□□□□ 0.56
C9orf78-201ENST00000372447 MKL1Q969V6 931 aa18.56■□□□□ 0.56
C9orf78-201ENST00000372447 MS4A4AQ96JQ5 239 aa18.56■□□□□ 0.56
C9orf78-201ENST00000372447 SPATA32Q96LK8 384 aa18.56■□□□□ 0.56
C9orf78-201ENST00000372447 UBAC1Q9BSL1 405 aa18.56■□□□□ 0.56
C9orf78-201ENST00000372447 ARHGEF10LQ9HCE6 1279 aa18.56■□□□□ 0.56
C9orf78-201ENST00000372447 TNKSO95271 1327 aa18.56■□□□□ 0.56
C9orf78-201ENST00000372447 PHIPQ8WWQ0 1821 aa18.56■□□□□ 0.56
C9orf78-201ENST00000372447 PPFIA3O75145 1194 aa18.55■□□□□ 0.56
C9orf78-201ENST00000372447 LETM1O95202 739 aaPredicted RBP18.55■□□□□ 0.56
C9orf78-201ENST00000372447 VEGFBP49765 207 aa18.55■□□□□ 0.56
C9orf78-201ENST00000372447 FOSBP53539 338 aa18.55■□□□□ 0.56
C9orf78-201ENST00000372447 DGKZQ13574 1117 aa18.55■□□□□ 0.56
C9orf78-201ENST00000372447 DGKHQ86XP1 1220 aa18.55■□□□□ 0.56
C9orf78-201ENST00000372447 ENAHQ8N8S7 591 aaPredicted RBP18.55■□□□□ 0.56
C9orf78-201ENST00000372447 LEO1Q8WVC0 666 aaPredicted RBP18.55■□□□□ 0.56
C9orf78-201ENST00000372447 TFIP11Q9UBB9 837 aaKnown RBP18.55■□□□□ 0.56
C9orf78-201ENST00000372447 TMX2Q9Y320 296 aa18.55■□□□□ 0.56
C9orf78-201ENST00000372447 IFIT3O14879 490 aaKnown RBP18.55■□□□□ 0.56
C9orf78-201ENST00000372447 LIFRP42702 1097 aa18.55■□□□□ 0.56
C9orf78-201ENST00000372447 SNAPC2Q13487 334 aa18.55■□□□□ 0.56
C9orf78-201ENST00000372447 SEC23AQ15436 765 aa18.55■□□□□ 0.56
C9orf78-201ENST00000372447 ZYXQ15942 572 aaKnown RBP18.55■□□□□ 0.56
C9orf78-201ENST00000372447 TMEM67Q5HYA8 995 aa18.55■□□□□ 0.56
C9orf78-201ENST00000372447 SGMS1Q86VZ5 419 aa18.55■□□□□ 0.56
C9orf78-201ENST00000372447 RAB11FIP4Q86YS3 637 aa18.55■□□□□ 0.56
C9orf78-201ENST00000372447 KIAA1683Q9H0B3 1180 aa18.55■□□□□ 0.56
C9orf78-201ENST00000372447 LY9Q9HBG7 655 aa18.55■□□□□ 0.56
C9orf78-201ENST00000372447 CEP350Q5VT06 3117 aa18.54■□□□□ 0.56
C9orf78-201ENST00000372447 A0A0G2JLL6 359 aaPredicted RBP18.54■□□□□ 0.56
C9orf78-201ENST00000372447 C19orf81C9J6K1 198 aa18.54■□□□□ 0.56
C9orf78-201ENST00000372447 AOC2O75106 756 aa18.54■□□□□ 0.56
C9orf78-201ENST00000372447 METAP2P50579 478 aaKnown RBP eCLIP18.54■□□□□ 0.56
C9orf78-201ENST00000372447 GTF2A2P52657 109 aa18.54■□□□□ 0.56
C9orf78-201ENST00000372447 HMGCS2P54868 508 aa18.54■□□□□ 0.56
C9orf78-201ENST00000372447 CCDC178Q5BJE1 867 aa18.54■□□□□ 0.56
C9orf78-201ENST00000372447 PPP4R3BQ5MIZ7 849 aa18.54■□□□□ 0.56
C9orf78-201ENST00000372447 APOA5Q6Q788 366 aa18.54■□□□□ 0.56
C9orf78-201ENST00000372447 PRRT2Q7Z6L0 340 aaPredicted RBP18.54■□□□□ 0.56
C9orf78-201ENST00000372447 LRRC47Q8N1G4 583 aaKnown RBP18.54■□□□□ 0.56
C9orf78-201ENST00000372447 ANKS1AQ92625 1134 aa18.54■□□□□ 0.56
C9orf78-201ENST00000372447 FEZ1Q99689 392 aa18.54■□□□□ 0.56
C9orf78-201ENST00000372447 TMEM47Q9BQJ4 181 aa18.54■□□□□ 0.56
C9orf78-201ENST00000372447 EMILIN3Q9NT22 766 aa18.54■□□□□ 0.56
C9orf78-201ENST00000372447 CFAP45Q9UL16 551 aa18.54■□□□□ 0.56
C9orf78-201ENST00000372447 PCNTO95613 3336 aa18.53■□□□□ 0.56
C9orf78-201ENST00000372447 NOGQ13253 232 aa18.53■□□□□ 0.56
C9orf78-201ENST00000372447 SH3D19Q5HYK7 790 aa18.53■□□□□ 0.56
C9orf78-201ENST00000372447 KIAA1755Q5JYT7 1200 aa18.53■□□□□ 0.56
C9orf78-201ENST00000372447 NFXL1Q6ZNB6 911 aa18.53■□□□□ 0.56
C9orf78-201ENST00000372447 MTA3Q9BTC8 594 aa18.53■□□□□ 0.56
C9orf78-201ENST00000372447 TSPY26PQ9H489 355 aa18.53■□□□□ 0.56
C9orf78-201ENST00000372447 SENP2Q9HC62 589 aa18.53■□□□□ 0.56
C9orf78-201ENST00000372447 ORC3Q9UBD5 711 aaPredicted RBP18.53■□□□□ 0.56
C9orf78-201ENST00000372447 ERICH2A1L162 156 aa18.53■□□□□ 0.56
C9orf78-201ENST00000372447 KIF23Q02241 960 aaPredicted RBP18.53■□□□□ 0.56
C9orf78-201ENST00000372447 MOGSQ13724 837 aa18.53■□□□□ 0.56
C9orf78-201ENST00000372447 SART3Q15020 963 aaKnown RBP18.53■□□□□ 0.56
C9orf78-201ENST00000372447 ANP32BQ92688 251 aaKnown RBP18.53■□□□□ 0.56
C9orf78-201ENST00000372447 SH2D4AQ9H788 454 aa18.53■□□□□ 0.56
C9orf78-201ENST00000372447 CCL15-CCL14A0A0B4J2E2 113 aa18.52■□□□□ 0.55
C9orf78-201ENST00000372447 ZBTB43O43298 467 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms