RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 IQCB1Q15051 598 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 CREB3L3Q68CJ9 461 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 C3orf67Q6ZVT6 689 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 CEP112Q8N8E3 955 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 GTF3C2Q8WUA4 911 aaPredicted RBP10□□□□□ -0.81
ATG4A-203ENST00000372232 TNMDQ9H2S6 317 aa10□□□□□ -0.81
ATG4A-203ENST00000372232 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10□□□□□ -0.816e-6■■■■■ 48.1
ATG4A-203ENST00000372232 RBM8AQ9Y5S9 174 aaKnown RBP10□□□□□ -0.81
ATG4A-203ENST00000372232 MED23Q9ULK4 1368 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 NFXL1Q6ZNB6 911 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 MAB21L3Q8N8X9 362 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 CCDC150Q8NCX0 1101 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 C1orf216Q8TAB5 229 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 TCP11Q8WWU5 503 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 GOLGA1Q92805 767 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 MMTAG2Q9BU76 263 aaKnown RBP9.99□□□□□ -0.81
ATG4A-203ENST00000372232 FAM204AQ9H8W3 233 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 CXXC1Q9P0U4 656 aaPredicted RBP9.99□□□□□ -0.81
ATG4A-203ENST00000372232 L1RE1Q9UN81 338 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.99□□□□□ -0.81
ATG4A-203ENST00000372232 UBR2Q8IWV8 1755 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 SCAMP3O14828 347 aaKnown RBP9.99□□□□□ -0.81
ATG4A-203ENST00000372232 FANCGO15287 622 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 IMPDH2P12268 514 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 HSP90B2PQ58FF3 399 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 NCAPG2Q86XI2 1143 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 HOMER1Q86YM7 354 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 EDC3Q96F86 508 aaKnown RBP9.99□□□□□ -0.81
ATG4A-203ENST00000372232 TSPAN18Q96SJ8 248 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 DBNDD2Q9BQY9 259 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 TINF2Q9BSI4 451 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 CRACR2AQ9BSW2 395 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 DDX19AQ9NUU7 478 aaKnown RBP9.99□□□□□ -0.81
ATG4A-203ENST00000372232 RAB21Q9UL25 225 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 ZNF232Q9UNY5 417 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 CYP46A1Q9Y6A2 500 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 CAPN7Q9Y6W3 813 aa9.99□□□□□ -0.81
ATG4A-203ENST00000372232 GOLGA6L19H0YKK7 550 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 SLC27A2O14975 620 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 PPP2R3AQ06190 1150 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 RINLQ6ZS11 566 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 TAS1R3Q7RTX0 852 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 ATG9AQ7Z3C6 839 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 KIAA1328Q86T90 577 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 ZNF589Q86UQ0 364 aaPredicted RBP9.98□□□□□ -0.81
ATG4A-203ENST00000372232 C3orf20Q8ND61 904 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 MAGEC3Q8TD91 643 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 AFAP1L1Q8TED9 768 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 SYTL4Q96C24 671 aaPredicted RBP9.98□□□□□ -0.81
ATG4A-203ENST00000372232 DNAJC25Q9H1X3 360 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 CLSTN2Q9H4D0 955 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 TMOD3Q9NYL9 352 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 EGFL7Q9UHF1 273 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 MARCH6O60337 910 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 SYT1P21579 422 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 CCT5P48643 541 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 GNL2Q13823 731 aaKnown RBP9.98□□□□□ -0.81
ATG4A-203ENST00000372232 CAMK4Q16566 473 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 PROX2Q3B8N5 592 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 ARMCX6Q7L4S7 300 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 METTL16Q86W50 562 aaKnown RBP9.98□□□□□ -0.81
ATG4A-203ENST00000372232 RNF135Q8IUD6 432 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 RBM12BQ8IXT5 1001 aaKnown RBP9.98□□□□□ -0.81
ATG4A-203ENST00000372232 CKAP2LQ8IYA6 745 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 MPHOSPH8Q99549 860 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 HAUS7Q99871 368 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 IRX2Q9BZI1 471 aaPredicted RBP9.98□□□□□ -0.81
ATG4A-203ENST00000372232 ATP6V0A4Q9HBG4 840 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 CHMP3Q9Y3E7 222 aa9.98□□□□□ -0.81
ATG4A-203ENST00000372232 PAPPAQ13219 1627 aa9.97□□□□□ -0.81
ATG4A-203ENST00000372232 AFDNP55196 1824 aaKnown RBP9.97□□□□□ -0.81
ATG4A-203ENST00000372232 JCADQ9P266 1359 aa9.97□□□□□ -0.81
ATG4A-203ENST00000372232 ABCA3Q99758 1704 aa9.97□□□□□ -0.81
ATG4A-203ENST00000372232 POTEB2H3BUK9 544 aa9.97□□□□□ -0.81
ATG4A-203ENST00000372232 MYO1FO00160 1098 aa9.97□□□□□ -0.81
ATG4A-203ENST00000372232 TAF5LO75529 589 aa9.97□□□□□ -0.81
ATG4A-203ENST00000372232 DKK1O94907 266 aa9.97□□□□□ -0.81
ATG4A-203ENST00000372232 LARGE1O95461 756 aa9.97□□□□□ -0.81
ATG4A-203ENST00000372232 PSMA5P28066 241 aa9.97□□□□□ -0.81
ATG4A-203ENST00000372232 DNM1Q05193 864 aaKnown RBP9.97□□□□□ -0.81
ATG4A-203ENST00000372232 SNX1Q13596 522 aa9.97□□□□□ -0.81
ATG4A-203ENST00000372232 ZBTB10Q96DT7 871 aa9.97□□□□□ -0.81
ATG4A-203ENST00000372232 SAAL1Q96ER3 474 aa9.97□□□□□ -0.81
ATG4A-203ENST00000372232 ZSCAN31Q96LW9 406 aaPredicted RBP9.97□□□□□ -0.81
ATG4A-203ENST00000372232 BATF3Q9NR55 127 aa9.97□□□□□ -0.81
ATG4A-203ENST00000372232 SH2B1Q9NRF2 756 aaPredicted RBP9.97□□□□□ -0.81
ATG4A-203ENST00000372232 CEP126Q9P2H0 1117 aa9.97□□□□□ -0.81
ATG4A-203ENST00000372232 PRKAG2Q9UGJ0 569 aa9.97□□□□□ -0.81
ATG4A-203ENST00000372232 MRFAP1Q9Y605 127 aa9.97□□□□□ -0.81
ATG4A-203ENST00000372232 ERLIN1O75477 346 aa9.96□□□□□ -0.81
ATG4A-203ENST00000372232 CDKL5O76039 1030 aa9.96□□□□□ -0.81
ATG4A-203ENST00000372232 PIGBQ92521 554 aa9.96□□□□□ -0.81
ATG4A-203ENST00000372232 ISCA1Q9BUE6 129 aa9.96□□□□□ -0.81
ATG4A-203ENST00000372232 GPR108Q9NPR9 543 aa9.96□□□□□ -0.81
ATG4A-203ENST00000372232 LMCD1Q9NZU5 365 aa9.96□□□□□ -0.81
ATG4A-203ENST00000372232 SHANK3Q9BYB0 1731 aa9.96□□□□□ -0.81
ATG4A-203ENST00000372232 RFX7Q2KHR2 1363 aa9.96□□□□□ -0.81
ATG4A-203ENST00000372232 ECEL1O95672 775 aa9.96□□□□□ -0.82
ATG4A-203ENST00000372232 IL15P40933 162 aaPredicted RBP9.96□□□□□ -0.82
ATG4A-203ENST00000372232 TNNI2P48788 182 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms