RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 SNW1Q13573 536 aaKnown RBP14.93□□□□□ -0.02
LDB3-203ENST00000372056 SAFBQ15424 915 aaKnown RBP eCLIP14.93□□□□□ -0.02
LDB3-203ENST00000372056 PKN1Q16512 942 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 ABCB5Q2M3G0 1257 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 CCDC73Q6ZRK6 1079 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 USP50Q70EL3 339 aaPredicted RBP14.93□□□□□ -0.02
LDB3-203ENST00000372056 NOSTRINQ8IVI9 506 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 ENGASEQ8NFI3 743 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 SH2D4AQ9H788 454 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 KCNJ14Q9UNX9 436 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 PCDHAC2Q9Y5I4 1007 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 CNTNAP1P78357 1384 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 CCDC192P0DO97 292 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 FAM160A1Q05DH4 1040 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 RASA3Q14644 834 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 SLC39A14Q15043 492 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 SF3A1Q15459 793 aaKnown RBP14.93□□□□□ -0.02
LDB3-203ENST00000372056 SUPT20HL1Q3ZLR7 823 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 SH3BP5LQ7L8J4 393 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 ZFPM1Q8IX07 1006 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 DIS3L2Q8IYB7 885 aaKnown RBP14.93□□□□□ -0.02
LDB3-203ENST00000372056 FSIP1Q8NA03 581 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 TMEM47Q9BQJ4 181 aa14.93□□□□□ -0.02
LDB3-203ENST00000372056 FOXP1Q9H334 677 aaPredicted RBP14.93□□□□□ -0.02
LDB3-203ENST00000372056 GLTPD2A6NH11 291 aa14.92□□□□□ -0.02
LDB3-203ENST00000372056 BTBD18B2RXH4 712 aa14.92□□□□□ -0.02
LDB3-203ENST00000372056 MRPS27Q92552 414 aaKnown RBP14.92□□□□□ -0.02
LDB3-203ENST00000372056 CEP95Q96GE4 821 aa14.92□□□□□ -0.02
LDB3-203ENST00000372056 PDLIM2Q96JY6 352 aa14.92□□□□□ -0.02
LDB3-203ENST00000372056 HACL1Q9UJ83 578 aa14.92□□□□□ -0.02
LDB3-203ENST00000372056 V9GY48 417 aaPredicted RBP14.92□□□□□ -0.02
LDB3-203ENST00000372056 CNTNAP5Q8WYK1 1306 aa14.92□□□□□ -0.02
LDB3-203ENST00000372056 MPHOSPH10O00566 681 aaKnown RBP14.91□□□□□ -0.02
LDB3-203ENST00000372056 ASNSP08243 561 aa14.91□□□□□ -0.02
LDB3-203ENST00000372056 GRM4Q14833 912 aa14.91□□□□□ -0.02
LDB3-203ENST00000372056 UVSSAQ2YD98 709 aa14.91□□□□□ -0.02
LDB3-203ENST00000372056 TBC1D10BQ4KMP7 808 aaPredicted RBP14.91□□□□□ -0.02
LDB3-203ENST00000372056 ASPRV1Q53RT3 343 aa14.91□□□□□ -0.02
LDB3-203ENST00000372056 GPATCH4Q5T3I0 446 aaKnown RBP14.91□□□□□ -0.02
LDB3-203ENST00000372056 SAMD7Q7Z3H4 446 aa14.91□□□□□ -0.02
LDB3-203ENST00000372056 CKAP2LQ8IYA6 745 aa14.91□□□□□ -0.02
LDB3-203ENST00000372056 SRBD1Q8N5C6 995 aaKnown RBP14.91□□□□□ -0.02
LDB3-203ENST00000372056 SHISA4Q96DD7 197 aa14.91□□□□□ -0.02
LDB3-203ENST00000372056 AKR1B1P15121 316 aa14.91□□□□□ -0.02
LDB3-203ENST00000372056 TYRO3Q06418 890 aa14.91□□□□□ -0.02
LDB3-203ENST00000372056 PTPAQ15257 358 aa14.91□□□□□ -0.02
LDB3-203ENST00000372056 AXDND1Q5T1B0 1012 aaPredicted RBP14.91□□□□□ -0.02
LDB3-203ENST00000372056 PNMA8AQ86V59 439 aaPredicted RBP14.91□□□□□ -0.02
LDB3-203ENST00000372056 DEFB129Q9H1M3 183 aa14.91□□□□□ -0.02
LDB3-203ENST00000372056 ARHGEF10LQ9HCE6 1279 aa14.91□□□□□ -0.02
LDB3-203ENST00000372056 MYH6P13533 1939 aa14.9□□□□□ -0.02
LDB3-203ENST00000372056 CTAGE5O15320 804 aa14.9□□□□□ -0.02
LDB3-203ENST00000372056 KINO60870 393 aaKnown RBP14.9□□□□□ -0.02
LDB3-203ENST00000372056 PARP1P09874 1014 aaKnown RBP14.9□□□□□ -0.02
LDB3-203ENST00000372056 FMR1NBQ8N0W7 255 aaPredicted RBP14.9□□□□□ -0.02
LDB3-203ENST00000372056 DCPSQ96C86 337 aaKnown RBP14.9□□□□□ -0.02
LDB3-203ENST00000372056 PGAP2Q9UHJ9 254 aa14.9□□□□□ -0.02
LDB3-203ENST00000372056 GREB1LQ9C091 1923 aaPredicted RBP14.89□□□□□ -0.03
LDB3-203ENST00000372056 hCG_1642624A0A1W2PR95 340 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 hCG_1984214I3L0E3 225 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 CTNND1O60716 968 aaKnown RBP14.89□□□□□ -0.03
LDB3-203ENST00000372056 PPP6R2O75170 966 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 DDNO94850 711 aaPredicted RBP14.89□□□□□ -0.03
LDB3-203ENST00000372056 NR5A1Q13285 461 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 ZNF713Q8N859 430 aaPredicted RBP14.89□□□□□ -0.03
LDB3-203ENST00000372056 JMYQ8N9B5 988 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 OXER1Q8TDS5 423 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 PHF20Q9BVI0 1012 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 DNAJC18Q9H819 358 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.89□□□□□ -0.03
LDB3-203ENST00000372056 VPS54Q9P1Q0 977 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 MRVI1Q9Y6F6 885 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 PALM3A6NDB9 673 aaPredicted RBP14.89□□□□□ -0.03
LDB3-203ENST00000372056 CMA1P23946 247 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 MARCKSP29966 332 aaPredicted RBP14.89□□□□□ -0.03
LDB3-203ENST00000372056 TOB1P50616 345 aaPredicted RBP14.89□□□□□ -0.03
LDB3-203ENST00000372056 NDUFA8P51970 172 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 ICA1Q05084 483 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 TRAF1Q13077 416 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 RILPL1Q5EBL4 403 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 GMCL1P1Q8NEA9 526 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 DCAF4Q8WV16 495 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 SPZ1Q9BXG8 430 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 ZNF341Q9BYN7 854 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 TMEM39BQ9GZU3 492 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 SH3GLB2Q9NR46 395 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 CLIP2Q9UDT6 1046 aa14.89□□□□□ -0.03
LDB3-203ENST00000372056 SCN4AP35499 1836 aa14.88□□□□□ -0.03
LDB3-203ENST00000372056 A0A1B0GVL5 298 aa14.88□□□□□ -0.03
LDB3-203ENST00000372056 SNHG28P0DPA3 235 aa14.88□□□□□ -0.03
LDB3-203ENST00000372056 CAP2P40123 477 aa14.88□□□□□ -0.03
LDB3-203ENST00000372056 EPS15P42566 896 aa14.88□□□□□ -0.03
LDB3-203ENST00000372056 ANGEL2Q5VTE6 544 aaKnown RBP14.88□□□□□ -0.03
LDB3-203ENST00000372056 TEX2Q8IWB9 1127 aa14.88□□□□□ -0.03
LDB3-203ENST00000372056 CCDC12Q8WUD4 166 aaPredicted RBP14.88□□□□□ -0.03
LDB3-203ENST00000372056 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.88□□□□□ -0.03
LDB3-203ENST00000372056 SIPA1L1O43166 1804 aa14.87□□□□□ -0.03
LDB3-203ENST00000372056 SCG2P13521 617 aa14.87□□□□□ -0.03
LDB3-203ENST00000372056 GALNT17Q6IS24 598 aa14.87□□□□□ -0.03
LDB3-203ENST00000372056 SULF1Q8IWU6 871 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms