RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 ZNF827Q17R98 1081 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 LARGE2Q8N3Y3 721 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 AFAP1L1Q8TED9 768 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 FAM212AQ96EL1 285 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 PICK1Q9NRD5 415 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 PPP2R2CQ9Y2T4 447 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 ATP2A2P16615 1042 aaKnown RBP13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 SP4Q02446 784 aa13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 TCP10Q12799 353 aa13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 RRAGAQ7L523 313 aa13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 NELFCDQ8IXH7 590 aa13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 IWS1Q96ST2 819 aa13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 SELENOSQ9BQE4 189 aa13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 PSTPIP2Q9H939 334 aa13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 MRPL44Q9H9J2 332 aaKnown RBP13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 MADDQ8WXG6 1647 aa13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 RPS6KA1Q15418 735 aa13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 FLAD1Q8NFF5 587 aa13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 FBF1Q8TES7 1133 aa13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 SETBP1Q9Y6X0 1596 aa13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 GCNT3O95395 438 aa13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 RESTQ13127 1097 aa13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 PAK2Q13177 524 aa13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 DNAJC21Q5F1R6 531 aaKnown RBP13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 C2CD5Q86YS7 1000 aa13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 SYMPKQ92797 1274 aaKnown RBP13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 ERCC6L2Q5T890 1561 aa13.15□□□□□ -0.3
DEPDC1-201ENST00000370966 ATP2C2O75185 946 aa13.15□□□□□ -0.31
DEPDC1-201ENST00000370966 IGKV5-2P06315 115 aa13.15□□□□□ -0.31
DEPDC1-201ENST00000370966 RUFY4Q6ZNE9 571 aa13.15□□□□□ -0.31
DEPDC1-201ENST00000370966 CCDC25Q86WR0 208 aa13.15□□□□□ -0.31
DEPDC1-201ENST00000370966 UBLCP1Q8WVY7 318 aaPredicted RBP13.15□□□□□ -0.31
DEPDC1-201ENST00000370966 SH2B2O14492 632 aaPredicted RBP13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 LARGE1O95461 756 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 RPN1P04843 607 aaKnown RBP13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 KRT5P13647 590 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 DLGAP5Q15398 846 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 KIAA1524Q8TCG1 905 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 CCDC17Q96LX7 622 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 PAIP2Q9BPZ3 127 aaKnown RBP13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 PUS7LQ9H0K6 701 aaKnown RBP13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 USP31Q70CQ4 1352 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 RPAP1Q9BWH6 1393 aaPredicted RBP13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 XDHP47989 1333 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 EFCAB8A8MWE9 144 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 ATP5DP30049 168 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 TECP42680 631 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 BTDP43251 543 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 USH1GQ495M9 461 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 USPL1Q5W0Q7 1092 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 APBB1IPQ7Z5R6 666 aaPredicted RBP13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 SLFN12Q8IYM2 578 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 ZNF215Q9UL58 517 aaPredicted RBP13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 UTP11Q9Y3A2 253 aaKnown RBP13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 CEP104O60308 925 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 IGSF3O75054 1194 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 LIN9Q5TKA1 542 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 AK8Q96MA6 479 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 NLRC4Q9NPP4 1024 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 TMOD4Q9NZQ9 345 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 TBC1D7Q9P0N9 293 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 ALKQ9UM73 1620 aa13.14□□□□□ -0.31
DEPDC1-201ENST00000370966 ZBED4O75132 1171 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 XRCC5P13010 732 aaKnown RBP13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 STRN3Q13033 797 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 TTLL11Q8NHH1 800 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 MYCNP04198 464 aaPredicted RBP13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 PPFIA1Q13136 1202 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 GPATCH4Q5T3I0 446 aaKnown RBP13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 TYW1BQ6NUM6 668 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 B4GALNT4Q76KP1 1039 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 SAMD15Q9P1V8 674 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 ARMCX3Q9UH62 379 aaPredicted RBP13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 GOLGA6CA6NDK9 693 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 GOLGA6BA6NDN3 693 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 GAS7O60861 476 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 FOSP01100 380 aaPredicted RBP13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 MMP1P03956 469 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 SLFN14P0C7P3 912 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 GOLGA6DP0CG33 693 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 DPCR1Q3MIW9 517 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 TMC4Q7Z404 712 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 GOLGA6AQ9NYA3 693 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 CTTNBP2NLQ9P2B4 639 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 PCDHB13Q9Y5F0 798 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 RFX7Q2KHR2 1363 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 ADGRB3O60242 1522 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 CYP27B1O15528 508 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 STAT1P42224 750 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 RAD51AP2Q09MP3 1159 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 ZYXQ15942 572 aaKnown RBP13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 PEX26Q7Z412 305 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 GPBP1Q86WP2 473 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 CCDC114Q96M63 670 aa13.13□□□□□ -0.31
DEPDC1-201ENST00000370966 MYL1P05976 194 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 LONRF3Q496Y0 759 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 FAM26FQ5R3K3 315 aa13.12□□□□□ -0.31
DEPDC1-201ENST00000370966 CPXCR1Q8N123 301 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms