RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 MTMR7Q9Y216 660 aa17.39■□□□□ 0.37
SF3B5-201ENST00000367569 TMX2Q9Y320 296 aa17.39■□□□□ 0.37
SF3B5-201ENST00000367569 NR2E3Q9Y5X4 410 aa17.39■□□□□ 0.37
SF3B5-201ENST00000367569 RPTORQ8N122 1335 aa17.39■□□□□ 0.37
SF3B5-201ENST00000367569 PLIN4Q96Q06 1357 aa17.39■□□□□ 0.37
SF3B5-201ENST00000367569 IGKV6D-41A0A0C4DH26 115 aa17.38■□□□□ 0.37
SF3B5-201ENST00000367569 TSPY2A6NKD2 308 aa17.38■□□□□ 0.37
SF3B5-201ENST00000367569 USP17L15C9J2P7 530 aa17.38■□□□□ 0.37
SF3B5-201ENST00000367569 USP17L13C9JLJ4 530 aa17.38■□□□□ 0.37
SF3B5-201ENST00000367569 USP17L11C9JVI0 530 aa17.38■□□□□ 0.37
SF3B5-201ENST00000367569 USP17L18D6R9N7 530 aa17.38■□□□□ 0.37
SF3B5-201ENST00000367569 USP17L22D6RA61 530 aa17.38■□□□□ 0.37
SF3B5-201ENST00000367569 USP17L17D6RBQ6 530 aa17.38■□□□□ 0.37
SF3B5-201ENST00000367569 USP17L19D6RCP7 530 aa17.38■□□□□ 0.37
SF3B5-201ENST00000367569 USP17L20D6RJB6 530 aa17.38■□□□□ 0.37
SF3B5-201ENST00000367569 MFAP1P55081 439 aaKnown RBP17.38■□□□□ 0.37
SF3B5-201ENST00000367569 USP17L24Q0WX57 530 aa17.38■□□□□ 0.37
SF3B5-201ENST00000367569 ALX1Q15699 326 aa17.38■□□□□ 0.37
SF3B5-201ENST00000367569 NUDT12Q9BQG2 462 aa17.38■□□□□ 0.37
SF3B5-201ENST00000367569 HMX1Q9NP08 348 aaPredicted RBP17.38■□□□□ 0.37
SF3B5-201ENST00000367569 CLIP2Q9UDT6 1046 aa17.38■□□□□ 0.37
SF3B5-201ENST00000367569 ISY1Q9ULR0 285 aaKnown RBP17.38■□□□□ 0.37
SF3B5-201ENST00000367569 ALPK3Q96L96 1907 aa17.38■□□□□ 0.37
SF3B5-201ENST00000367569 ZMYM6O95789 1325 aa17.38■□□□□ 0.37
SF3B5-201ENST00000367569 SPDYE16A6NNV3 312 aaPredicted RBP17.37■□□□□ 0.37
SF3B5-201ENST00000367569 CNMDO75829 334 aa17.37■□□□□ 0.37
SF3B5-201ENST00000367569 MAPK4P31152 587 aa17.37■□□□□ 0.37
SF3B5-201ENST00000367569 PTH1RQ03431 593 aa17.37■□□□□ 0.37
SF3B5-201ENST00000367569 FAM83BQ5T0W9 1011 aa17.37■□□□□ 0.37
SF3B5-201ENST00000367569 CATSPERGQ6ZRH7 1159 aa17.37■□□□□ 0.37
SF3B5-201ENST00000367569 GPR142Q7Z601 462 aa17.37■□□□□ 0.37
SF3B5-201ENST00000367569 GTF3C2Q8WUA4 911 aaPredicted RBP17.37■□□□□ 0.37
SF3B5-201ENST00000367569 SOCS4Q8WXH5 440 aa17.37■□□□□ 0.37
SF3B5-201ENST00000367569 USP6NLQ92738 828 aa17.37■□□□□ 0.37
SF3B5-201ENST00000367569 SH2D4AQ9H788 454 aa17.37■□□□□ 0.37
SF3B5-201ENST00000367569 ZNF287Q9HBT7 754 aa17.37■□□□□ 0.37
SF3B5-201ENST00000367569 FBXO28Q9NVF7 368 aa17.37■□□□□ 0.37
SF3B5-201ENST00000367569 ANAPC4Q9UJX5 808 aa17.37■□□□□ 0.37
SF3B5-201ENST00000367569 EVI5O60447 810 aa17.36■□□□□ 0.37
SF3B5-201ENST00000367569 FLOT1O75955 427 aa17.36■□□□□ 0.37
SF3B5-201ENST00000367569 XRCC5P13010 732 aaKnown RBP17.36■□□□□ 0.37
SF3B5-201ENST00000367569 MORN1Q5T089 497 aa17.36■□□□□ 0.37
SF3B5-201ENST00000367569 MAP3K21Q5TCX8 1036 aa17.36■□□□□ 0.37
SF3B5-201ENST00000367569 CCAR1Q8IX12 1150 aaKnown RBP17.36■□□□□ 0.37
SF3B5-201ENST00000367569 NEDD1Q8NHV4 660 aa17.36■□□□□ 0.37
SF3B5-201ENST00000367569 ATG4CQ96DT6 458 aa17.36■□□□□ 0.37
SF3B5-201ENST00000367569 PRO3102Q9H379 93 aa17.36■□□□□ 0.37
SF3B5-201ENST00000367569 RAD50Q92878 1312 aa17.36■□□□□ 0.37
SF3B5-201ENST00000367569 NDUFB10O96000 172 aa17.35■□□□□ 0.37
SF3B5-201ENST00000367569 PRKAR2AP13861 404 aaKnown RBP17.35■□□□□ 0.37
SF3B5-201ENST00000367569 MNX1P50219 401 aaPredicted RBP17.35■□□□□ 0.37
SF3B5-201ENST00000367569 CCL14Q16627 93 aa17.35■□□□□ 0.37
SF3B5-201ENST00000367569 NECAB2Q7Z6G3 386 aa17.35■□□□□ 0.37
SF3B5-201ENST00000367569 PLEKHH3Q7Z736 793 aa17.35■□□□□ 0.37
SF3B5-201ENST00000367569 TICAM2Q86XR7 235 aa17.35■□□□□ 0.37
SF3B5-201ENST00000367569 ANKLE1Q8NAG6 615 aa17.35■□□□□ 0.37
SF3B5-201ENST00000367569 GOPCQ9HD26 462 aa17.35■□□□□ 0.37
SF3B5-201ENST00000367569 MTMR4Q9NYA4 1195 aa17.35■□□□□ 0.37
SF3B5-201ENST00000367569 BTBD7Q9P203 1132 aa17.35■□□□□ 0.37
SF3B5-201ENST00000367569 STX8Q9UNK0 236 aa17.35■□□□□ 0.37
SF3B5-201ENST00000367569 RABGAP1Q9Y3P9 1069 aa17.35■□□□□ 0.37
SF3B5-201ENST00000367569 WDR46O15213 610 aaKnown RBP17.34■□□□□ 0.37
SF3B5-201ENST00000367569 ORC4O43929 436 aa17.34■□□□□ 0.37
SF3B5-201ENST00000367569 RGS2P41220 211 aa17.34■□□□□ 0.37
SF3B5-201ENST00000367569 CACNB2Q08289 660 aaPredicted RBP17.34■□□□□ 0.37
SF3B5-201ENST00000367569 WDR78Q5VTH9 848 aa17.34■□□□□ 0.37
SF3B5-201ENST00000367569 ZKSCAN3Q9BRR0 538 aa17.34■□□□□ 0.37
SF3B5-201ENST00000367569 DSCC1Q9BVC3 393 aa17.34■□□□□ 0.37
SF3B5-201ENST00000367569 IL17RBQ9NRM6 502 aa17.34■□□□□ 0.37
SF3B5-201ENST00000367569 NYAP2Q9P242 653 aa17.34■□□□□ 0.37
SF3B5-201ENST00000367569 OGDHLQ9ULD0 1010 aa17.34■□□□□ 0.37
SF3B5-201ENST00000367569 TAF6LQ9Y6J9 622 aa17.34■□□□□ 0.37
SF3B5-201ENST00000367569 ZNF213O14771 459 aa17.33■□□□□ 0.36
SF3B5-201ENST00000367569 SGSM2O43147 1006 aa17.33■□□□□ 0.36
SF3B5-201ENST00000367569 TTLL1O95922 423 aa17.33■□□□□ 0.36
SF3B5-201ENST00000367569 ZKSCAN1P17029 563 aaPredicted RBP17.33■□□□□ 0.36
SF3B5-201ENST00000367569 AKNAD1Q5T1N1 836 aa17.33■□□□□ 0.36
SF3B5-201ENST00000367569 LBX2Q6XYB7 198 aa17.33■□□□□ 0.36
SF3B5-201ENST00000367569 MFSD6Q6ZSS7 791 aa17.33■□□□□ 0.36
SF3B5-201ENST00000367569 STAG1Q8WVM7 1258 aa17.33■□□□□ 0.36
SF3B5-201ENST00000367569 RUFY2Q8WXA3 655 aa17.33■□□□□ 0.36
SF3B5-201ENST00000367569 LPAR1Q92633 364 aa17.33■□□□□ 0.36
SF3B5-201ENST00000367569 B4E1Z4 1266 aa17.32■□□□□ 0.36
SF3B5-201ENST00000367569 F5H6K3 240 aa17.32■□□□□ 0.36
SF3B5-201ENST00000367569 CCND3P30281 292 aaPredicted RBP17.32■□□□□ 0.36
SF3B5-201ENST00000367569 KLRC3Q07444 240 aa17.32■□□□□ 0.36
SF3B5-201ENST00000367569 MAP2K5Q13163 448 aa17.32■□□□□ 0.36
SF3B5-201ENST00000367569 PLS1Q14651 629 aa17.32■□□□□ 0.36
SF3B5-201ENST00000367569 TRMT44Q8IYL2 757 aaKnown RBP17.32■□□□□ 0.36
SF3B5-201ENST00000367569 CWC22Q9HCG8 908 aaKnown RBP17.32■□□□□ 0.36
SF3B5-201ENST00000367569 KDM4AO75164 1064 aa17.31■□□□□ 0.36
SF3B5-201ENST00000367569 CCNA1P78396 465 aa17.31■□□□□ 0.36
SF3B5-201ENST00000367569 IMMTQ16891 758 aaKnown RBP17.31■□□□□ 0.36
SF3B5-201ENST00000367569 BMP2KLQ5H9B9 411 aa17.31■□□□□ 0.36
SF3B5-201ENST00000367569 APBA2Q99767 749 aa17.31■□□□□ 0.36
SF3B5-201ENST00000367569 PPP4R2Q9NY27 417 aa17.31■□□□□ 0.36
SF3B5-201ENST00000367569 LAMA3Q16787 3333 aa17.31■□□□□ 0.36
SF3B5-201ENST00000367569 FGRP09769 529 aa17.3■□□□□ 0.36
SF3B5-201ENST00000367569 PTPREP23469 700 aa17.3■□□□□ 0.36
SF3B5-201ENST00000367569 DSG3P32926 999 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms