RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 PRPF31Q8WWY3 499 aaKnown RBP9.83□□□□□ -0.84
SYNE1-209ENST00000367257 RBM17Q96I25 401 aaKnown RBP9.83□□□□□ -0.84
SYNE1-209ENST00000367257 POLKQ9UBT6 870 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 TACC3Q9Y6A5 838 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 THAP12O43422 761 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 BRD1O95696 1058 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 DNM2P50570 870 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 ANKRD20A3Q5VUR7 823 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 FAM210AQ96ND0 272 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 SPZ1Q9BXG8 430 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 SAR1BQ9Y6B6 198 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 UGGT1Q9NYU2 1555 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 LAD1O00515 517 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 RETREG2Q8NC44 543 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 USP6NLQ92738 828 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 IRS4O14654 1257 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-209ENST00000367257 HSPA6P17066 643 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 TNNI3KQ59H18 835 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 PDZD4Q76G19 769 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-209ENST00000367257 NSMCE1Q8WV22 266 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 DTNBP1Q96EV8 351 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 KLHL14Q9P2G3 628 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 PPP1R1BQ9UD71 204 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-209ENST00000367257 FPGT-TNNI3KV9GXZ4 949 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 ZNF202O95125 648 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 ARL1P40616 181 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-209ENST00000367257 ADCY7P51828 1080 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 RWDD2BP57060 319 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 TRIM68Q6AZZ1 485 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 MAGEB6Q8N7X4 407 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 TBC1D22AQ8WUA7 517 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 IP6K1Q92551 441 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 CHCHD3Q9NX63 227 aaKnown RBP9.82□□□□□ -0.84
SYNE1-209ENST00000367257 AMFRQ9UKV5 643 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 SNX14Q9Y5W7 946 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 TMEM110-MUSTN1A8MSY1 372 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 H7C1D1 291 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 PFDN6O15212 129 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 HIP1RO75146 1068 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 HSPA8P11142 646 aaKnown RBP9.82□□□□□ -0.84
SYNE1-209ENST00000367257 NBPF20Q3BBV1 942 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 CCDC25Q86WR0 208 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 OR8K1Q8NGG5 319 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 KIFC2Q96AC6 838 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 IFT122Q9HBG6 1241 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 DNM3Q9UQ16 869 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 SPATA31E1Q6ZUB1 1445 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 A0A1W2PQ27 194 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 A0A1W2PQ64 194 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 A0A1W2PQD8 194 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 VWA3AA6NCI4 1184 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 GOLGA8CPA6NN73 597 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 SESN3P58005 492 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 SLMAPQ14BN4 828 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 NBPF9Q3BBW0 867 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 DZIP3Q86Y13 1208 aaKnown RBP9.82□□□□□ -0.84
SYNE1-209ENST00000367257 BCAS4Q8TDM0 211 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 ABTB1Q969K4 478 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-209ENST00000367257 TRIM11Q96F44 468 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 RMDN2Q96LZ7 410 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 ZC3H12CQ9C0D7 883 aaKnown RBP9.82□□□□□ -0.84
SYNE1-209ENST00000367257 CCDC169A6NNP5 214 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 RNMTO43148 476 aaKnown RBP9.82□□□□□ -0.84
SYNE1-209ENST00000367257 KRT9P35527 623 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 KLHL30Q0D2K2 578 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 TFCP2Q12800 502 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 RASEFQ8IZ41 740 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 PDCD7Q8N8D1 485 aaKnown RBP9.82□□□□□ -0.84
SYNE1-209ENST00000367257 SUPT20HQ8NEM7 779 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 MORC4Q8TE76 937 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 SIRT1Q96EB6 747 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 LCMT1Q9UIC8 334 aa9.82□□□□□ -0.84
SYNE1-209ENST00000367257 FAF1Q9UNN5 650 aaPredicted RBP9.82□□□□□ -0.84
SYNE1-209ENST00000367257 ARHGEF35A5YM69 484 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 hCG_1984214I3L0E3 225 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 FOXO3O43524 673 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 PEX26Q7Z412 305 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 ZNF713Q8N859 430 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-209ENST00000367257 RABEP2Q9H5N1 569 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 CACYBPQ9HB71 228 aaKnown RBP9.81□□□□□ -0.84
SYNE1-209ENST00000367257 ARPP21Q9UBL0 812 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-209ENST00000367257 XIRP1Q702N8 1843 aaKnown RBP9.81□□□□□ -0.84
SYNE1-209ENST00000367257 PDE8AO60658 829 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 DCAF17Q5H9S7 520 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-209ENST00000367257 ZNF354CQ86Y25 554 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 DIS3L2Q8IYB7 885 aaKnown RBP9.81□□□□□ -0.84
SYNE1-209ENST00000367257 TEX11Q8IYF3 940 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 HACE1Q8IYU2 909 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 RABGGTAQ92696 567 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 CSRNP1Q96S65 589 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 KIF2CQ99661 725 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 RIC8AQ9NPQ8 531 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 ATP8A2Q9NTI2 1148 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 NEXMIFQ5QGS0 1516 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 TRAPPC10P48553 1259 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 CCT5P48643 541 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 PSMD7P51665 324 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 STX17P56962 302 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 MUM1Q2TAK8 710 aa9.81□□□□□ -0.84
SYNE1-209ENST00000367257 PPP4R1Q8TF05 950 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms