RNA–Protein interactions for RNA: ENST00000366661.8

TTC13-201, Transcript of tetratricopeptide repeat domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC13, Length 3,253 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13-201ENST00000366661 RGS17Q9UGC6 210 aaPredicted RBP17.25■□□□□ 0.35
TTC13-201ENST00000366661 CHUKO15111 745 aa17.25■□□□□ 0.35
TTC13-201ENST00000366661 CCDC102BQ68D86 513 aa17.25■□□□□ 0.35
TTC13-201ENST00000366661 PRPF6O94906 941 aaKnown RBP17.25■□□□□ 0.35
TTC13-201ENST00000366661 USP5P45974 858 aa17.25■□□□□ 0.35
TTC13-201ENST00000366661 SCARF1Q14162 830 aa17.25■□□□□ 0.35
TTC13-201ENST00000366661 AFDNP55196 1824 aaKnown RBP17.24■□□□□ 0.35
TTC13-201ENST00000366661 KLF18A0A0U1RQI7 1052 aa17.24■□□□□ 0.35
TTC13-201ENST00000366661 OPLAHO14841 1288 aa17.24■□□□□ 0.35
TTC13-201ENST00000366661 GNPATO15228 680 aa17.24■□□□□ 0.35
TTC13-201ENST00000366661 CXCR5P32302 372 aa17.24■□□□□ 0.35
TTC13-201ENST00000366661 RNASE9P60153 205 aaKnown RBP17.24■□□□□ 0.35
TTC13-201ENST00000366661 KRT32Q14532 448 aa17.24■□□□□ 0.35
TTC13-201ENST00000366661 CCDC40Q4G0X9 1142 aa17.24■□□□□ 0.35
TTC13-201ENST00000366661 TACO1Q9BSH4 297 aaKnown RBP17.24■□□□□ 0.35
TTC13-201ENST00000366661 RTEL1Q9NZ71 1219 aa17.24■□□□□ 0.35
TTC13-201ENST00000366661 ANKRD18BA2A2Z9 1011 aa17.24■□□□□ 0.35
TTC13-201ENST00000366661 KRT14P02533 472 aa17.24■□□□□ 0.35
TTC13-201ENST00000366661 CTSWP56202 376 aa17.24■□□□□ 0.35
TTC13-201ENST00000366661 TTC39AQ5SRH9 613 aa17.24■□□□□ 0.35
TTC13-201ENST00000366661 COG1Q8WTW3 980 aa17.24■□□□□ 0.35
TTC13-201ENST00000366661 XAGE2Q96GT9 111 aa17.24■□□□□ 0.35
TTC13-201ENST00000366661 E7EVH7 732 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 IKBKBO14920 756 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 BMP6P22004 513 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 SLC9C2Q5TAH2 1124 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 FCHSD1Q86WN1 690 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 HDAC7Q8WUI4 952 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 PHKBQ93100 1093 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 SPDL1Q96EA4 605 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 HAUS2Q9NVX0 235 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 EIF3HO15372 352 aaKnown RBP eCLIP17.23■□□□□ 0.35
TTC13-201ENST00000366661 POLR2DO15514 142 aaKnown RBP17.23■□□□□ 0.35
TTC13-201ENST00000366661 ATP1A1P05023 1023 aaKnown RBP17.23■□□□□ 0.35
TTC13-201ENST00000366661 PPFIA1Q13136 1202 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 WASHC4Q2M389 1173 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 DHX32Q7L7V1 743 aaKnown RBP17.23■□□□□ 0.35
TTC13-201ENST00000366661 MICAL1Q8TDZ2 1067 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 UBE2Q2LH0YL09 131 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 HIP1O00291 1037 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 FDPSP14324 419 aaKnown RBP17.23■□□□□ 0.35
TTC13-201ENST00000366661 ATP5JP18859 108 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 PDIA3P30101 505 aaKnown RBP17.23■□□□□ 0.35
TTC13-201ENST00000366661 FXR1P51114 621 aaKnown RBP eCLIP17.23■□□□□ 0.35
TTC13-201ENST00000366661 METTL16Q86W50 562 aaKnown RBP17.23■□□□□ 0.35
TTC13-201ENST00000366661 IFT81Q8WYA0 676 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 FAXDC2Q96IV6 333 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 EHD2Q9NZN4 543 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 ARFGEF2Q9Y6D5 1785 aa17.23■□□□□ 0.35
TTC13-201ENST00000366661 CARMIL3Q8ND23 1372 aa17.22■□□□□ 0.35
TTC13-201ENST00000366661 WTIPA6NIX2 430 aaPredicted RBP17.22■□□□□ 0.35
TTC13-201ENST00000366661 HGSO14964 777 aaPredicted RBP17.22■□□□□ 0.35
TTC13-201ENST00000366661 EZRP15311 586 aaKnown RBP17.22■□□□□ 0.35
TTC13-201ENST00000366661 NAP1L1P55209 391 aaKnown RBP17.22■□□□□ 0.35
TTC13-201ENST00000366661 RIPOR2Q9Y4F9 1068 aa17.22■□□□□ 0.35
TTC13-201ENST00000366661 GUCY2FP51841 1108 aa17.22■□□□□ 0.35
TTC13-201ENST00000366661 SHC4Q6S5L8 630 aa17.22■□□□□ 0.35
TTC13-201ENST00000366661 KRT27Q7Z3Y8 459 aa17.22■□□□□ 0.35
TTC13-201ENST00000366661 KIAA1328Q86T90 577 aa17.22■□□□□ 0.35
TTC13-201ENST00000366661 AMIGO3Q86WK7 504 aa17.22■□□□□ 0.35
TTC13-201ENST00000366661 TEX11Q8IYF3 940 aa17.22■□□□□ 0.35
TTC13-201ENST00000366661 NBPF3Q9H094 633 aa17.22■□□□□ 0.35
TTC13-201ENST00000366661 CPSF2Q9P2I0 782 aaKnown RBP17.22■□□□□ 0.35
TTC13-201ENST00000366661 CCNL1Q9UK58 526 aaPredicted RBP17.22■□□□□ 0.35
TTC13-201ENST00000366661 KCNH3Q9ULD8 1083 aa17.22■□□□□ 0.35
TTC13-201ENST00000366661 G3BP2Q9UN86 482 aaKnown RBP17.22■□□□□ 0.35
TTC13-201ENST00000366661 USP42Q9H9J4 1324 aaKnown RBP17.22■□□□□ 0.35
TTC13-201ENST00000366661 CHP1Q99653 195 aa17.22■□□□□ 0.35
TTC13-201ENST00000366661 PAG1Q9NWQ8 432 aa17.22■□□□□ 0.35
TTC13-201ENST00000366661 SERTAD1Q9UHV2 236 aa17.22■□□□□ 0.35
TTC13-201ENST00000366661 GRIN1Q05586 938 aa17.21■□□□□ 0.35
TTC13-201ENST00000366661 USPL1Q5W0Q7 1092 aa17.21■□□□□ 0.35
TTC13-201ENST00000366661 PARD3BQ8TEW8 1205 aa17.21■□□□□ 0.35
TTC13-201ENST00000366661 SH3TC1Q8TE82 1336 aa17.21■□□□□ 0.35
TTC13-201ENST00000366661 ESYT3A0FGR9 886 aa17.21■□□□□ 0.35
TTC13-201ENST00000366661 N4BP3O15049 544 aa17.21■□□□□ 0.35
TTC13-201ENST00000366661 CAMTA2O94983 1202 aa17.21■□□□□ 0.35
TTC13-201ENST00000366661 HDLBPQ00341 1268 aaKnown RBP17.21■□□□□ 0.35
TTC13-201ENST00000366661 TRIM28Q13263 835 aaKnown RBP17.21■□□□□ 0.35
TTC13-201ENST00000366661 CCDC122Q5T0U0 273 aa17.21■□□□□ 0.35
TTC13-201ENST00000366661 FAM196AQ6ZSG2 479 aa17.21■□□□□ 0.35
TTC13-201ENST00000366661 MYL10Q9BUA6 226 aa17.21■□□□□ 0.35
TTC13-201ENST00000366661 YIPF3Q9GZM5 350 aa17.21■□□□□ 0.35
TTC13-201ENST00000366661 SLC40A1Q9NP59 571 aa17.21■□□□□ 0.35
TTC13-201ENST00000366661 HMG20BQ9P0W2 317 aa17.21■□□□□ 0.35
TTC13-201ENST00000366661 DDX20Q9UHI6 824 aaKnown RBP17.21■□□□□ 0.35
TTC13-201ENST00000366661 A0A1B0GUA9 196 aa17.2■□□□□ 0.34
TTC13-201ENST00000366661 AGPSO00116 658 aa17.2■□□□□ 0.34
TTC13-201ENST00000366661 GCFC2P16383 781 aaKnown RBP17.2■□□□□ 0.34
TTC13-201ENST00000366661 CALRP27797 417 aaKnown RBP17.2■□□□□ 0.34
TTC13-201ENST00000366661 PCMTD1Q96MG8 357 aaPredicted RBP17.2■□□□□ 0.34
TTC13-201ENST00000366661 MEFVO15553 781 aaPredicted RBP17.2■□□□□ 0.34
TTC13-201ENST00000366661 PDE8AO60658 829 aa17.2■□□□□ 0.34
TTC13-201ENST00000366661 LGR5O75473 907 aa17.2■□□□□ 0.34
TTC13-201ENST00000366661 ZAP70P43403 619 aa17.2■□□□□ 0.34
TTC13-201ENST00000366661 PNMA8AQ86V59 439 aaPredicted RBP17.2■□□□□ 0.34
TTC13-201ENST00000366661 SMARCC2Q8TAQ2 1214 aa17.2■□□□□ 0.34
TTC13-201ENST00000366661 TAB2Q9NYJ8 693 aa17.2■□□□□ 0.34
TTC13-201ENST00000366661 MCM8Q9UJA3 840 aa17.2■□□□□ 0.34
TTC13-201ENST00000366661 USP14P54578 494 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms