RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 VHLLQ6RSH7 139 aa4.17□□□□□ -1.74
RNU6-428P-201ENST00000362942 TSPYL5Q86VY4 417 aaPredicted RBP4.17□□□□□ -1.74
RNU6-428P-201ENST00000362942 CRACR2BQ8N4Y2 399 aaPredicted RBP4.17□□□□□ -1.74
RNU6-428P-201ENST00000362942 SYTL5Q8TDW5 730 aaPredicted RBP4.17□□□□□ -1.74
RNU6-428P-201ENST00000362942 NBPF4Q96M43 638 aa4.17□□□□□ -1.74
RNU6-428P-201ENST00000362942 DSCC1Q9BVC3 393 aa4.17□□□□□ -1.74
RNU6-428P-201ENST00000362942 TRIM55Q9BYV6 548 aa4.17□□□□□ -1.74
RNU6-428P-201ENST00000362942 SEMA3GQ9NS98 782 aa4.17□□□□□ -1.74
RNU6-428P-201ENST00000362942 DUSP13Q9UII6 198 aa4.17□□□□□ -1.74
RNU6-428P-201ENST00000362942 CNTNAP4Q9C0A0 1308 aa4.17□□□□□ -1.74
RNU6-428P-201ENST00000362942 SIGLEC6O43699 453 aa4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 PPM1BO75688 479 aa4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 MED26O95402 600 aa4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 SRFP11831 508 aa4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 LTKP29376 864 aa4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 GTF2F1P35269 517 aaKnown RBP eCLIP4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 ETFBP38117 255 aa4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 GP2P55259 537 aaKnown RBP4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 RBM10P98175 930 aaKnown RBP4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 LARP1BQ659C4 914 aaKnown RBP4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 CWF19L1Q69YN2 538 aaKnown RBP4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 HEATR6Q6AI08 1181 aaKnown RBP4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 ANKS3Q6ZW76 656 aa4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 ZNF655Q8N720 491 aaPredicted RBP4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 DAGLBQ8NCG7 672 aa4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 PI4K2BQ8TCG2 481 aa4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 ZNF512BQ96KM6 892 aaPredicted RBP4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 DRC1Q96MC2 740 aa4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 CHST7Q9NS84 486 aa4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 WHRNQ9P202 907 aa4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 COL17A1Q9UMD9 1497 aaPredicted RBP4.16□□□□□ -1.74
RNU6-428P-201ENST00000362942 A0A087WZG4 1122 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 KRTAP4-8A0A0G2JLE6 195 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 LRRN2O75325 713 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 DDAH1O94760 285 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 TP53P04637 393 aaPredicted RBP4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 GSNP06396 782 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 CD8BP10966 210 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 CD247P20963 164 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 PCBP3P57721 371 aaKnown RBP4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 ZP2Q05996 745 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 BNIP3Q12983 259 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 PLCL1Q15111 1095 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 ZYXQ15942 572 aaKnown RBP4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 TDRD10Q5VZ19 366 aaKnown RBP4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 KIAA1211LQ6NV74 962 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 SLC23A3Q6PIS1 610 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 RNF111Q6ZNA4 994 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 ADAT2Q7Z6V5 191 aaKnown RBP4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 CREG2Q8IUH2 290 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 FAM169BQ8N8A8 192 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 DHX38Q92620 1227 aaKnown RBP4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 APBA2Q99767 749 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 PRDM14Q9GZV8 571 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 DUSP15Q9H1R2 295 aaPredicted RBP4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 DIS3Q9Y2L1 958 aaKnown RBP4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 SUGT1Q9Y2Z0 365 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 SF3B6Q9Y3B4 125 aaKnown RBP4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 U3KQE9 123 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 LTBP3Q9NS15 1303 aa4.15□□□□□ -1.75
RNU6-428P-201ENST00000362942 ANKRD34BA5PLL1 514 aa4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 C9IYK1 514 aa4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 AGRPO00253 132 aa4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 FUT4P22083 530 aa4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 NOP2P46087 812 aaKnown RBP4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 DUSP4Q13115 394 aa4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 AXDND1Q5T1B0 1012 aaPredicted RBP4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 POMZP3Q6PJE2 187 aa4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 EEPD1Q7L9B9 569 aa4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 FAM178BQ8IXR5 827 aa4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 Q8N3U1 123 aa4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 UBXN4Q92575 508 aa4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 HAUS7Q99871 368 aa4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 HDAC8Q9BY41 377 aa4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 EPN3Q9H201 632 aa4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 CARS2Q9HA77 564 aaKnown RBP4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 GP6Q9HCN6 339 aa4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 ATP13A1Q9HD20 1204 aa4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 PAK6Q9NQU5 681 aaPredicted RBP4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 GFOD1Q9NXC2 390 aa4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 FHOD1Q9Y613 1164 aa4.14□□□□□ -1.75
RNU6-428P-201ENST00000362942 BIN1O00499 593 aa4.13□□□□□ -1.75
RNU6-428P-201ENST00000362942 NOP56O00567 594 aaKnown RBP4.13□□□□□ -1.75
RNU6-428P-201ENST00000362942 PRAMEF1O95521 474 aa4.13□□□□□ -1.75
RNU6-428P-201ENST00000362942 POU4F1Q01851 419 aa4.13□□□□□ -1.75
RNU6-428P-201ENST00000362942 EGR3Q06889 387 aa4.13□□□□□ -1.75
RNU6-428P-201ENST00000362942 RAB33AQ14088 237 aa4.13□□□□□ -1.75
RNU6-428P-201ENST00000362942 GAB4Q2WGN9 574 aa4.13□□□□□ -1.75
RNU6-428P-201ENST00000362942 DCAF15Q66K64 600 aa4.13□□□□□ -1.75
RNU6-428P-201ENST00000362942 ZNF574Q6ZN55 896 aaPredicted RBP4.13□□□□□ -1.75
RNU6-428P-201ENST00000362942 TMC3Q7Z5M5 1100 aa4.13□□□□□ -1.75
RNU6-428P-201ENST00000362942 PPFIBP1Q86W92 1011 aa4.13□□□□□ -1.75
RNU6-428P-201ENST00000362942 LINC00116Q8NCU8 138 aa4.13□□□□□ -1.75
RNU6-428P-201ENST00000362942 HNRNPLLQ8WVV9 542 aaKnown RBP4.13□□□□□ -1.75
RNU6-428P-201ENST00000362942 TCTN2Q96GX1 697 aa4.13□□□□□ -1.75
RNU6-428P-201ENST00000362942 ALPK1Q96QP1 1244 aa4.13□□□□□ -1.75
RNU6-428P-201ENST00000362942 FAM86C1Q9NVL1 165 aa4.13□□□□□ -1.75
RNU6-428P-201ENST00000362942 SIRPGQ9P1W8 387 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms