RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 CREBRFQ8IUR6 639 aa8.9□□□□□ -0.98
CCL28-201ENST00000361115 WRNIP1Q96S55 665 aa8.9□□□□□ -0.98
CCL28-201ENST00000361115 PHAXQ9H814 394 aaKnown RBP8.9□□□□□ -0.98
CCL28-201ENST00000361115 STAP2Q9UGK3 403 aa8.9□□□□□ -0.98
CCL28-201ENST00000361115 PLXNB2O15031 1838 aa8.9□□□□□ -0.98
CCL28-201ENST00000361115 PNMA6AP0CW24 399 aaPredicted RBP8.9□□□□□ -0.98
CCL28-201ENST00000361115 BEND3Q5T5X7 828 aa8.9□□□□□ -0.98
CCL28-201ENST00000361115 NECAB1Q8N987 351 aa8.9□□□□□ -0.98
CCL28-201ENST00000361115 LSG1Q9H089 658 aaKnown RBP8.9□□□□□ -0.98
CCL28-201ENST00000361115 TSPYL1Q9H0U9 437 aa8.9□□□□□ -0.98
CCL28-201ENST00000361115 CNNM1Q9NRU3 951 aa8.9□□□□□ -0.98
CCL28-201ENST00000361115 HERC5Q9UII4 1024 aaKnown RBP8.9□□□□□ -0.98
CCL28-201ENST00000361115 C19orf81C9J6K1 198 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 POLR3GO15318 223 aaPredicted RBP8.89□□□□□ -0.99
CCL28-201ENST00000361115 CASTP20810 708 aaKnown RBP8.89□□□□□ -0.99
CCL28-201ENST00000361115 GPAT2Q6NUI2 795 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 LDHAL6AQ6ZMR3 332 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 RBM43Q6ZSC3 357 aaKnown RBP8.89□□□□□ -0.99
CCL28-201ENST00000361115 CCAR2Q8N163 923 aaKnown RBP8.89□□□□□ -0.99
CCL28-201ENST00000361115 WDR18Q9BV38 432 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 TFIP11Q9UBB9 837 aaKnown RBP8.89□□□□□ -0.99
CCL28-201ENST00000361115 LDHCP07864 332 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 CDC25BP30305 580 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 COPB2P35606 906 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 RBM5P52756 815 aaKnown RBP eCLIP8.89□□□□□ -0.99
CCL28-201ENST00000361115 FAM84BQ96KN1 310 aaPredicted RBP8.89□□□□□ -0.99
CCL28-201ENST00000361115 RNF208Q9H0X6 261 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 CLSTN2Q9H4D0 955 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 HMX1Q9NP08 348 aaPredicted RBP8.89□□□□□ -0.99
CCL28-201ENST00000361115 IL1RAPL2Q9NP60 686 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 WDR70Q9NW82 654 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 CCDC69A6NI79 296 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 IRF6O14896 467 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 SGSM2O43147 1006 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 NR1I2O75469 434 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 COL6A1P12109 1028 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 HOXA7P31268 230 aaPredicted RBP8.89□□□□□ -0.99
CCL28-201ENST00000361115 LBX2Q6XYB7 198 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 LPIN2Q92539 896 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 RSPH14Q9UHP6 348 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 AFG3L2Q9Y4W6 797 aa8.89□□□□□ -0.99
CCL28-201ENST00000361115 GNAI2P04899 355 aa8.88□□□□□ -0.99
CCL28-201ENST00000361115 FGFR2P21802 821 aa8.88□□□□□ -0.99
CCL28-201ENST00000361115 KRT85P78386 507 aa8.88□□□□□ -0.99
CCL28-201ENST00000361115 ADCK5Q3MIX3 580 aa8.88□□□□□ -0.99
CCL28-201ENST00000361115 SYT10Q6XYQ8 523 aa8.88□□□□□ -0.99
CCL28-201ENST00000361115 LCMT1Q9UIC8 334 aa8.88□□□□□ -0.99
CCL28-201ENST00000361115 TRIM66O15016 1216 aa8.88□□□□□ -0.99
CCL28-201ENST00000361115 INHAP05111 366 aa8.88□□□□□ -0.99
CCL28-201ENST00000361115 PLCG2P16885 1265 aa8.88□□□□□ -0.99
CCL28-201ENST00000361115 IQCB1Q15051 598 aa8.88□□□□□ -0.99
CCL28-201ENST00000361115 ME3Q16798 604 aa8.88□□□□□ -0.99
CCL28-201ENST00000361115 C11orf57Q6ZUT1 292 aaPredicted RBP8.88□□□□□ -0.99
CCL28-201ENST00000361115 FILIP1Q7Z7B0 1213 aa8.88□□□□□ -0.99
CCL28-201ENST00000361115 VPS37DQ86XT2 251 aa8.88□□□□□ -0.99
CCL28-201ENST00000361115 FAM117AQ9C073 453 aa8.88□□□□□ -0.99
CCL28-201ENST00000361115 ELP1O95163 1332 aa8.88□□□□□ -0.99
CCL28-201ENST00000361115 CEP350Q5VT06 3117 aa8.88□□□□□ -0.99
CCL28-201ENST00000361115 A0A087WWV3 80 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 PDE8BO95263 885 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 TFRCP02786 760 aaKnown RBP8.87□□□□□ -0.99
CCL28-201ENST00000361115 KRBA2Q6ZNG9 492 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 SMARCE1Q969G3 411 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 DHX36Q9H2U1 1008 aaKnown RBP8.87□□□□□ -0.99
CCL28-201ENST00000361115 TMX1Q9H3N1 280 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 KDM4CQ9H3R0 1056 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 MTMR10Q9NXD2 777 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 PDE4DIPQ5VU43 2346 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 TNPO2O14787 897 aaKnown RBP8.87□□□□□ -0.99
CCL28-201ENST00000361115 EPB41L2O43491 1005 aaKnown RBP8.87□□□□□ -0.99
CCL28-201ENST00000361115 ZRANB2O95218 330 aaKnown RBP eCLIP8.87□□□□□ -0.99
CCL28-201ENST00000361115 COL9A3Q14050 684 aaPredicted RBP8.87□□□□□ -0.99
CCL28-201ENST00000361115 LARP1BQ659C4 914 aaKnown RBP8.87□□□□□ -0.99
CCL28-201ENST00000361115 SLC51AQ86UW1 340 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 TXNRD3Q86VQ6 643 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 VGLL2Q8N8G2 317 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 CHMP4CQ96CF2 233 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 PGBD1Q96JS3 809 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 L2HGDHQ9H9P8 463 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 SYNGAP1Q96PV0 1343 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 GYS2P54840 703 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 CCNA1P78396 465 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 ARHGAP29Q52LW3 1261 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 RNF20Q5VTR2 975 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 APOBEC3HQ6NTF7 200 aaKnown RBP8.87□□□□□ -0.99
CCL28-201ENST00000361115 DLK2Q6UY11 383 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 METTL16Q86W50 562 aaKnown RBP8.87□□□□□ -0.99
CCL28-201ENST00000361115 JAKMIP1Q96N16 626 aaKnown RBP8.87□□□□□ -0.99
CCL28-201ENST00000361115 TANGO6Q9C0B7 1094 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 PDRG1Q9NUG6 133 aa8.87□□□□□ -0.99
CCL28-201ENST00000361115 DDX19AQ9NUU7 478 aaKnown RBP8.87□□□□□ -0.99
CCL28-201ENST00000361115 GOLGA6L4A6NEF3 574 aa8.86□□□□□ -0.99
CCL28-201ENST00000361115 NEMFO60524 1076 aa8.86□□□□□ -0.99
CCL28-201ENST00000361115 SEC31AO94979 1220 aaKnown RBP8.86□□□□□ -0.99
CCL28-201ENST00000361115 NOP2P46087 812 aaKnown RBP8.86□□□□□ -0.99
CCL28-201ENST00000361115 ATP8B2P98198 1209 aa8.86□□□□□ -0.99
CCL28-201ENST00000361115 SARM1Q6SZW1 724 aa8.86□□□□□ -0.99
CCL28-201ENST00000361115 CWC27Q6UX04 472 aaKnown RBP8.86□□□□□ -0.99
CCL28-201ENST00000361115 LEO1Q8WVC0 666 aaPredicted RBP8.86□□□□□ -0.99
CCL28-201ENST00000361115 MRFAP1L1Q96HT8 127 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms