RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 TECP42680 631 aa20.25■□□□□ 0.83
SHANK1-202ENST00000359082 RPS6KA2Q15349 733 aa20.25■□□□□ 0.83
SHANK1-202ENST00000359082 RGS16O15492 202 aaPredicted RBP20.25■□□□□ 0.83
SHANK1-202ENST00000359082 SGSM2O43147 1006 aa20.25■□□□□ 0.83
SHANK1-202ENST00000359082 YWHAEP62258 255 aaKnown RBP20.25■□□□□ 0.83
SHANK1-202ENST00000359082 TRIM50Q86XT4 487 aa20.25■□□□□ 0.83
SHANK1-202ENST00000359082 KBTBD3Q8NAB2 608 aa20.25■□□□□ 0.83
SHANK1-202ENST00000359082 GLG1Q92896 1179 aa20.25■□□□□ 0.83
SHANK1-202ENST00000359082 SCYL1Q96KG9 808 aa20.25■□□□□ 0.83
SHANK1-202ENST00000359082 LGR6Q9HBX8 967 aa20.25■□□□□ 0.83
SHANK1-202ENST00000359082 RNF169Q8NCN4 708 aa20.25■□□□□ 0.83
SHANK1-202ENST00000359082 PPP4R1Q8TF05 950 aa20.25■□□□□ 0.83
SHANK1-202ENST00000359082 DDX41Q9UJV9 622 aaKnown RBP20.25■□□□□ 0.83
SHANK1-202ENST00000359082 MAP3K19Q56UN5 1328 aa20.25■□□□□ 0.83
SHANK1-202ENST00000359082 ARHGAP42A6NI28 874 aa20.25■□□□□ 0.83
SHANK1-202ENST00000359082 KCNK3O14649 394 aa20.25■□□□□ 0.83
SHANK1-202ENST00000359082 TAB3Q8N5C8 712 aaPredicted RBP20.25■□□□□ 0.83
SHANK1-202ENST00000359082 RAB3IPQ96QF0 476 aaPredicted RBP20.25■□□□□ 0.83
SHANK1-202ENST00000359082 GNA14O95837 355 aa20.24■□□□□ 0.83
SHANK1-202ENST00000359082 REXO1Q8N1G1 1221 aaKnown RBP20.24■□□□□ 0.83
SHANK1-202ENST00000359082 CD2APQ9Y5K6 639 aa20.24■□□□□ 0.83
SHANK1-202ENST00000359082 PNMA6EA0A0J9YXQ4 647 aa20.24■□□□□ 0.83
SHANK1-202ENST00000359082 MORC3Q14149 939 aa20.24■□□□□ 0.83
SHANK1-202ENST00000359082 EIF4G3O43432 1585 aaKnown RBP20.24■□□□□ 0.83
SHANK1-202ENST00000359082 OATP04181 439 aa20.24■□□□□ 0.83
SHANK1-202ENST00000359082 NLRX1Q86UT6 975 aa20.24■□□□□ 0.83
SHANK1-202ENST00000359082 ZNF526Q8TF50 670 aaPredicted RBP20.24■□□□□ 0.83
SHANK1-202ENST00000359082 P3H4Q92791 437 aa20.24■□□□□ 0.83
SHANK1-202ENST00000359082 MMS19Q96T76 1030 aa20.24■□□□□ 0.83
SHANK1-202ENST00000359082 TACO1Q9BSH4 297 aaKnown RBP20.24■□□□□ 0.83
SHANK1-202ENST00000359082 CCDC87Q9NVE4 849 aa20.24■□□□□ 0.83
SHANK1-202ENST00000359082 TRPC6Q9Y210 931 aa20.24■□□□□ 0.83
SHANK1-202ENST00000359082 KDM3AQ9Y4C1 1321 aa20.24■□□□□ 0.83
SHANK1-202ENST00000359082 KDRP35968 1356 aa20.24■□□□□ 0.83
SHANK1-202ENST00000359082 ADCY8P40145 1251 aa20.24■□□□□ 0.83
SHANK1-202ENST00000359082 XPO4Q9C0E2 1151 aaKnown RBP20.24■□□□□ 0.83
SHANK1-202ENST00000359082 PAGR1Q9BTK6 254 aa20.24■□□□□ 0.83
SHANK1-202ENST00000359082 SLC52A2Q9HAB3 445 aa20.24■□□□□ 0.83
SHANK1-202ENST00000359082 USP40Q9NVE5 1235 aa20.24■□□□□ 0.83
SHANK1-202ENST00000359082 TRAPPC8Q9Y2L5 1435 aa20.23■□□□□ 0.83
SHANK1-202ENST00000359082 A6NNZ2 444 aa20.23■□□□□ 0.83
SHANK1-202ENST00000359082 WDR46O15213 610 aaKnown RBP20.23■□□□□ 0.83
SHANK1-202ENST00000359082 TROVE2P10155 538 aaKnown RBP eCLIP20.23■□□□□ 0.83
SHANK1-202ENST00000359082 TUBB8Q3ZCM7 444 aa20.23■□□□□ 0.83
SHANK1-202ENST00000359082 CERS3Q8IU89 383 aa20.23■□□□□ 0.83
SHANK1-202ENST00000359082 PPFIA1Q13136 1202 aa20.23■□□□□ 0.83
SHANK1-202ENST00000359082 EAPPQ56P03 285 aaPredicted RBP20.23■□□□□ 0.83
SHANK1-202ENST00000359082 ADAT2Q7Z6V5 191 aaKnown RBP20.23■□□□□ 0.83
SHANK1-202ENST00000359082 RABGAP1Q9Y3P9 1069 aa20.23■□□□□ 0.83
SHANK1-202ENST00000359082 LRRC43Q8N309 656 aa20.23■□□□□ 0.83
SHANK1-202ENST00000359082 HOOK2Q96ED9 719 aa20.23■□□□□ 0.83
SHANK1-202ENST00000359082 PANK4Q9NVE7 773 aa20.23■□□□□ 0.83
SHANK1-202ENST00000359082 BAIAP2L1Q9UHR4 511 aa20.23■□□□□ 0.83
SHANK1-202ENST00000359082 KRIT1O00522 736 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 SESTD1Q86VW0 696 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 CARD14Q9BXL6 1004 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 NT5C3AQ9H0P0 336 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 MLXIPQ9HAP2 919 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 K7ENM7 598 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 IFNB1P01574 187 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 SAT1P21673 171 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 PHBP35232 272 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 MYRIPQ8NFW9 859 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 LIG4P49917 911 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 PRR16Q569H4 304 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 NUCKS1Q9H1E3 243 aaKnown RBP20.22■□□□□ 0.83
SHANK1-202ENST00000359082 RRAGDQ9NQL2 400 aaPredicted RBP20.22■□□□□ 0.83
SHANK1-202ENST00000359082 SAR1BQ9Y6B6 198 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 XRCC5P13010 732 aaKnown RBP20.22■□□□□ 0.83
SHANK1-202ENST00000359082 GABPB1Q06547 395 aaPredicted RBP20.22■□□□□ 0.83
SHANK1-202ENST00000359082 CCDC38Q502W7 563 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 FAM47CQ5HY64 1035 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 RNF40O75150 1001 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 ATF7P17544 494 aaPredicted RBP20.22■□□□□ 0.83
SHANK1-202ENST00000359082 GCKRQ14397 625 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 MUM1Q2TAK8 710 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 SUPT20HQ8NEM7 779 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 LMTK3Q96Q04 1460 aa20.22■□□□□ 0.83
SHANK1-202ENST00000359082 CAPN9O14815 690 aa20.21■□□□□ 0.83
SHANK1-202ENST00000359082 VPS41P49754 854 aa20.21■□□□□ 0.83
SHANK1-202ENST00000359082 EFCC1Q9HA90 598 aa20.21■□□□□ 0.83
SHANK1-202ENST00000359082 C4orf50Q6ZRC1 276 aa20.21■□□□□ 0.83
SHANK1-202ENST00000359082 NIM1KQ8IY84 436 aa20.21■□□□□ 0.83
SHANK1-202ENST00000359082 DPH5Q9H2P9 285 aa20.21■□□□□ 0.83
SHANK1-202ENST00000359082 GRK7Q8WTQ7 553 aa20.21■□□□□ 0.83
SHANK1-202ENST00000359082 DESI2Q9BSY9 194 aa20.21■□□□□ 0.83
SHANK1-202ENST00000359082 KAZNQ674X7 775 aa20.21■□□□□ 0.83
SHANK1-202ENST00000359082 TRIM68Q6AZZ1 485 aa20.21■□□□□ 0.83
SHANK1-202ENST00000359082 HACE1Q8IYU2 909 aa20.21■□□□□ 0.83
SHANK1-202ENST00000359082 SMCR8Q8TEV9 937 aaPredicted RBP20.21■□□□□ 0.83
SHANK1-202ENST00000359082 CDCA7Q9BWT1 371 aaPredicted RBP20.21■□□□□ 0.83
SHANK1-202ENST00000359082 PFKFB1P16118 471 aa20.2■□□□□ 0.82
SHANK1-202ENST00000359082 STAT1P42224 750 aa20.2■□□□□ 0.82
SHANK1-202ENST00000359082 GNGT1P63211 74 aa20.2■□□□□ 0.82
SHANK1-202ENST00000359082 DLGAP5Q15398 846 aa20.2■□□□□ 0.82
SHANK1-202ENST00000359082 CCDC84Q86UT8 332 aaPredicted RBP20.2■□□□□ 0.82
SHANK1-202ENST00000359082 ARPP21Q9UBL0 812 aaPredicted RBP20.2■□□□□ 0.82
SHANK1-202ENST00000359082 PIK3C2GO75747 1445 aa20.2■□□□□ 0.82
SHANK1-202ENST00000359082 ZMYM3Q14202 1370 aa20.2■□□□□ 0.82
SHANK1-202ENST00000359082 TRIM56Q9BRZ2 755 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms