RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 CPLX3Q8WVH0 158 aa28.35■■■□□ 2.13
HDGF-201ENST00000357325 CTNND2Q9UQB3 1225 aa28.35■■■□□ 2.13
HDGF-201ENST00000357325 GOLGA8HP0CJ92 632 aa28.34■■■□□ 2.13
HDGF-201ENST00000357325 MAST2Q6P0Q8 1798 aa28.34■■■□□ 2.13
HDGF-201ENST00000357325 A0A0U1RQJ8 604 aa28.33■■■□□ 2.13
HDGF-201ENST00000357325 BMP15O95972 392 aa28.33■■■□□ 2.13
HDGF-201ENST00000357325 BLIDQ8IZY5 108 aa28.33■■■□□ 2.13
HDGF-201ENST00000357325 ATRIPQ8WXE1 791 aa28.33■■■□□ 2.13
HDGF-201ENST00000357325 GSDMAQ96QA5 445 aa28.33■■■□□ 2.13
HDGF-201ENST00000357325 MKNK2Q9HBH9 465 aa28.33■■■□□ 2.13
HDGF-201ENST00000357325 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.33■■■□□ 2.131e-20■■□□□ 14.5
HDGF-201ENST00000357325 PP2D1A8MPX8 630 aa28.33■■■□□ 2.13
HDGF-201ENST00000357325 RGL2O15211 777 aa28.33■■■□□ 2.13
HDGF-201ENST00000357325 RFC4P35249 363 aa28.33■■■□□ 2.13
HDGF-201ENST00000357325 WDR24Q96S15 920 aa28.33■■■□□ 2.13
HDGF-201ENST00000357325 MAPK8IP1Q9UQF2 711 aa28.33■■■□□ 2.13
HDGF-201ENST00000357325 GRAPQ13588 217 aa28.32■■■□□ 2.12
HDGF-201ENST00000357325 CDKAL1Q5VV42 579 aa28.32■■■□□ 2.12
HDGF-201ENST00000357325 GRAPLQ8TC17 118 aaPredicted RBP28.32■■■□□ 2.12
HDGF-201ENST00000357325 SPTY2D1Q68D10 685 aaPredicted RBP28.32■■■□□ 2.12
HDGF-201ENST00000357325 FAM196AQ6ZSG2 479 aa28.32■■■□□ 2.12
HDGF-201ENST00000357325 NOL10Q9BSC4 688 aaKnown RBP28.32■■■□□ 2.12
HDGF-201ENST00000357325 SOWAHDA6NJG2 315 aa28.31■■■□□ 2.12
HDGF-201ENST00000357325 KIF5BP33176 963 aa28.31■■■□□ 2.12
HDGF-201ENST00000357325 RBL2Q08999 1139 aa28.31■■■□□ 2.12
HDGF-201ENST00000357325 KARSQ15046 597 aaKnown RBP28.31■■■□□ 2.12
HDGF-201ENST00000357325 WWC2Q6AWC2 1192 aa28.31■■■□□ 2.12
HDGF-201ENST00000357325 TMEM60Q9H2L4 133 aa28.31■■■□□ 2.12
HDGF-201ENST00000357325 ADD3Q9UEY8 706 aaKnown RBP28.31■■■□□ 2.12
HDGF-201ENST00000357325 STX8Q9UNK0 236 aa28.31■■■□□ 2.12
HDGF-201ENST00000357325 DGKHQ86XP1 1220 aa28.31■■■□□ 2.12
HDGF-201ENST00000357325 TSPY3P0CV98 308 aa28.3■■■□□ 2.12
HDGF-201ENST00000357325 TSPY8P0CW00 308 aa28.3■■■□□ 2.12
HDGF-201ENST00000357325 ZSCAN20P17040 1043 aaPredicted RBP28.3■■■□□ 2.12
HDGF-201ENST00000357325 GPSM2P81274 684 aa28.3■■■□□ 2.12
HDGF-201ENST00000357325 IQUBQ8NA54 791 aa28.3■■■□□ 2.12
HDGF-201ENST00000357325 PLIN2Q99541 437 aa28.3■■■□□ 2.12
HDGF-201ENST00000357325 PHLPP2Q6ZVD8 1323 aa28.3■■■□□ 2.12
HDGF-201ENST00000357325 STX10O60499 249 aa28.3■■■□□ 2.12
HDGF-201ENST00000357325 URI1O94763 535 aaPredicted RBP28.3■■■□□ 2.12
HDGF-201ENST00000357325 CCT6AP40227 531 aaKnown RBP28.3■■■□□ 2.12
HDGF-201ENST00000357325 RRAGBQ5VZM2 374 aa28.3■■■□□ 2.12
HDGF-201ENST00000357325 SMAP1Q8IYB5 467 aaPredicted RBP28.3■■■□□ 2.12
HDGF-201ENST00000357325 ZNF397Q8NF99 534 aaPredicted RBP28.3■■■□□ 2.12
HDGF-201ENST00000357325 WDR66Q8TBY9 1149 aa28.3■■■□□ 2.12
HDGF-201ENST00000357325 IRX2Q9BZI1 471 aaPredicted RBP28.3■■■□□ 2.12
HDGF-201ENST00000357325 PCDHA4Q9UN74 947 aa28.3■■■□□ 2.12
HDGF-201ENST00000357325 PARP3Q9Y6F1 533 aa28.3■■■□□ 2.12
HDGF-201ENST00000357325 M0R2N6 131 aa28.29■■■□□ 2.12
HDGF-201ENST00000357325 GRM4Q14833 912 aa28.29■■■□□ 2.12
HDGF-201ENST00000357325 TRAPPC3LQ5T215 181 aa28.29■■■□□ 2.12
HDGF-201ENST00000357325 TMEM47Q9BQJ4 181 aa28.29■■■□□ 2.12
HDGF-201ENST00000357325 MRPL44Q9H9J2 332 aaKnown RBP28.29■■■□□ 2.12
HDGF-201ENST00000357325 GDAQ9Y2T3 454 aa28.29■■■□□ 2.12
HDGF-201ENST00000357325 PBX1P40424 430 aa28.29■■■□□ 2.12
HDGF-201ENST00000357325 TRAPPC10P48553 1259 aa28.29■■■□□ 2.12
HDGF-201ENST00000357325 HEATR3Q7Z4Q2 680 aa28.29■■■□□ 2.12
HDGF-201ENST00000357325 IGSF22Q8N9C0 903 aa28.29■■■□□ 2.12
HDGF-201ENST00000357325 LRRC4BQ9NT99 713 aa28.29■■■□□ 2.12
HDGF-201ENST00000357325 DDX41Q9UJV9 622 aaKnown RBP28.29■■■□□ 2.12
HDGF-201ENST00000357325 PCDHA6Q9UN73 950 aa28.29■■■□□ 2.12
HDGF-201ENST00000357325 PCDHA8Q9Y5H6 950 aa28.29■■■□□ 2.12
HDGF-201ENST00000357325 RASA1P20936 1047 aa28.28■■■□□ 2.12
HDGF-201ENST00000357325 INF2Q27J81 1249 aa28.28■■■□□ 2.12
HDGF-201ENST00000357325 CNBD1Q8NA66 436 aa28.28■■■□□ 2.12
HDGF-201ENST00000357325 RTFDC1Q9BY42 306 aaPredicted RBP28.28■■■□□ 2.12
HDGF-201ENST00000357325 CCP110O43303 1012 aa28.28■■■□□ 2.12
HDGF-201ENST00000357325 ZSCAN12O43309 604 aa28.28■■■□□ 2.12
HDGF-201ENST00000357325 FCHSD1Q86WN1 690 aa28.28■■■□□ 2.12
HDGF-201ENST00000357325 LRRC15Q8TF66 581 aa28.28■■■□□ 2.12
HDGF-201ENST00000357325 CCDC34Q96HJ3 373 aa28.28■■■□□ 2.12
HDGF-201ENST00000357325 ZNF446Q9NWS9 450 aa28.28■■■□□ 2.12
HDGF-201ENST00000357325 RAD9BQ6WBX8 426 aa28.27■■■□□ 2.12
HDGF-201ENST00000357325 LEMD3Q9Y2U8 911 aa28.27■■■□□ 2.12
HDGF-201ENST00000357325 AKR1B15C9JRZ8 316 aaPredicted RBP28.26■■■□□ 2.12
HDGF-201ENST00000357325 PRR5LQ6MZQ0 368 aa28.26■■■□□ 2.12
HDGF-201ENST00000357325 CREBRFQ8IUR6 639 aa28.26■■■□□ 2.12
HDGF-201ENST00000357325 USP21Q9UK80 565 aa28.26■■■□□ 2.12
HDGF-201ENST00000357325 IGSF3O75054 1194 aa28.26■■■□□ 2.11
HDGF-201ENST00000357325 GNG11P61952 73 aa28.26■■■□□ 2.11
HDGF-201ENST00000357325 NAALADL2Q58DX5 795 aa28.26■■■□□ 2.11
HDGF-201ENST00000357325 ZNF444Q8N0Y2 327 aaPredicted RBP28.26■■■□□ 2.11
HDGF-201ENST00000357325 ANKS1AQ92625 1134 aa28.26■■■□□ 2.11
HDGF-201ENST00000357325 FEZ1Q99689 392 aa28.26■■■□□ 2.11
HDGF-201ENST00000357325 EPC1Q9H2F5 836 aa28.26■■■□□ 2.11
HDGF-201ENST00000357325 RNF225M0QZC1 329 aaPredicted RBP28.25■■■□□ 2.11
HDGF-201ENST00000357325 TOM1O60784 492 aa28.25■■■□□ 2.11
HDGF-201ENST00000357325 BTDP43251 543 aa28.25■■■□□ 2.11
HDGF-201ENST00000357325 CARD6Q9BX69 1037 aa28.25■■■□□ 2.11
HDGF-201ENST00000357325 TAF1LQ8IZX4 1826 aa28.25■■■□□ 2.11
HDGF-201ENST00000357325 CALML3P27482 149 aa28.25■■■□□ 2.11
HDGF-201ENST00000357325 CASP14P31944 242 aa28.25■■■□□ 2.11
HDGF-201ENST00000357325 OGFRQ9NZT2 677 aa28.25■■■□□ 2.11
HDGF-201ENST00000357325 ROBO3Q96MS0 1386 aa28.25■■■□□ 2.11
HDGF-201ENST00000357325 STXBP3O00186 592 aa28.24■■■□□ 2.11
HDGF-201ENST00000357325 GTPBP6O43824 516 aaPredicted RBP28.24■■■□□ 2.11
HDGF-201ENST00000357325 FXR1P51114 621 aaKnown RBP eCLIP28.24■■■□□ 2.11
HDGF-201ENST00000357325 KRT31Q15323 416 aa28.24■■■□□ 2.11
HDGF-201ENST00000357325 VPS16Q9H269 839 aa28.24■■■□□ 2.11
HDGF-201ENST00000357325 PPP4CP60510 307 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms