RNA–Protein interactions for RNA: ENST00000357246.3

MAP1LC3C-201, Transcript of microtubule associated protein 1 light chain 3 gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3C, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3C-201ENST00000357246 TTLL1O95922 423 aa10.05□□□□□ -0.8
MAP1LC3C-201ENST00000357246 PCP11498 1178 aaKnown RBP10.05□□□□□ -0.8
MAP1LC3C-201ENST00000357246 GSPT1P15170 499 aaKnown RBP10.05□□□□□ -0.8
MAP1LC3C-201ENST00000357246 CAPN2P17655 700 aa10.05□□□□□ -0.8
MAP1LC3C-201ENST00000357246 NOVP48745 357 aa10.05□□□□□ -0.8
MAP1LC3C-201ENST00000357246 UBXN2AP68543 259 aa10.05□□□□□ -0.8
MAP1LC3C-201ENST00000357246 FAM47AQ5JRC9 791 aa10.05□□□□□ -0.8
MAP1LC3C-201ENST00000357246 MORN1Q5T089 497 aa10.05□□□□□ -0.8
MAP1LC3C-201ENST00000357246 GPR142Q7Z601 462 aa10.05□□□□□ -0.8
MAP1LC3C-201ENST00000357246 PLEKHH3Q7Z736 793 aa10.05□□□□□ -0.8
MAP1LC3C-201ENST00000357246 CCAR1Q8IX12 1150 aaKnown RBP10.05□□□□□ -0.8
MAP1LC3C-201ENST00000357246 USP6NLQ92738 828 aa10.05□□□□□ -0.8
MAP1LC3C-201ENST00000357246 DSCC1Q9BVC3 393 aa10.05□□□□□ -0.8
MAP1LC3C-201ENST00000357246 TANGO6Q9C0B7 1094 aa10.05□□□□□ -0.8
MAP1LC3C-201ENST00000357246 TCP11L1Q9NUJ3 509 aa10.05□□□□□ -0.8
MAP1LC3C-201ENST00000357246 RNF216Q9NWF9 866 aaPredicted RBP10.05□□□□□ -0.8
MAP1LC3C-201ENST00000357246 SLC15A5A6NIM6 579 aa10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 TSPY2A6NKD2 308 aa10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 RANBP6O60518 1105 aaKnown RBP10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 NT5C2P49902 561 aa10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 MTFR1Q15390 333 aa10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 AKNAD1Q5T1N1 836 aa10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 TRMT44Q8IYL2 757 aaKnown RBP10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 GMCL1P1Q8NEA9 526 aa10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 SHCBP1Q8NEM2 672 aa10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 RUFY2Q8WXA3 655 aa10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 SOCS4Q8WXH5 440 aa10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 SPATC1LQ9H0A9 340 aa10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 IL17RBQ9NRM6 502 aa10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 BIN2Q9UBW5 565 aaPredicted RBP10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 CTNNA3Q9UI47 895 aa10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 PPP1R9AQ9ULJ8 1098 aa10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 COL11A1P12107 1806 aaPredicted RBP10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 HTTP42858 3142 aa10.04□□□□□ -0.8
MAP1LC3C-201ENST00000357246 VWA5AO00534 786 aa10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 ZNF213O14771 459 aa10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 SLC25A27O95847 323 aa10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 NDUFB10O96000 172 aa10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 GJB1P08034 283 aa10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 CCL5P13501 91 aa10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 ELNP15502 786 aa10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 EN2P19622 333 aaPredicted RBP10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 PTPREP23469 700 aa10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 CHMLP26374 656 aa10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 FAM83BQ5T0W9 1011 aa10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 MFSD6Q6ZSS7 791 aa10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 CENPQQ7L2Z9 268 aaPredicted RBP10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 PRPF38AQ8NAV1 312 aaKnown RBP10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 NKX2-3Q8TAU0 364 aa10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 STAG1Q8WVM7 1258 aa10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 ATG4CQ96DT6 458 aa10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 TTC14Q96N46 770 aa10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 MOV10L1Q9BXT6 1211 aaKnown RBP10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 NBPF3Q9H094 633 aa10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 RNF208Q9H0X6 261 aa10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 RNF41Q9H4P4 317 aaPredicted RBP10.03□□□□□ -0.8
MAP1LC3C-201ENST00000357246 CENPFP49454 3210 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 RAD21O60216 631 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 PLA2G6O60733 806 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 HMGCRP04035 888 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 INHAP05111 366 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 HOXC6P09630 235 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 FDX1P10109 184 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 CYP2B6P20813 491 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 STAT3P40763 770 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 RGS2P41220 211 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 GJA8P48165 433 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 MAP2K5Q13163 448 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 TMEM132BQ14DG7 1078 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 SLFN13Q68D06 897 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 ABRAQ8N0Z2 381 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 REPS2Q8NFH8 660 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 GMCL1Q96IK5 515 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 SLF1Q9BQI6 1058 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 MROH8Q9H579 483 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 FBXO28Q9NVF7 368 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 FEM1BQ9UK73 627 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 IVNS1ABPQ9Y6Y0 642 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 RPTORQ8N122 1335 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 RAD50Q92878 1312 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 A0A0G2JMZ2 1700 aa10.02□□□□□ -0.81
MAP1LC3C-201ENST00000357246 ATP2A1O14983 1001 aa10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 NMT2O60551 498 aa10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 SGPL1O95470 568 aa10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 MYCP01106 439 aaPredicted RBP10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 IGHA2P01877 340 aa10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 BMP3P12645 472 aa10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 ERCC3P19447 782 aa10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 HAND2P61296 217 aa10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 GRB14Q14449 540 aa10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 RCSD1Q6JBY9 416 aa10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 RIOX2Q8IUF8 465 aa10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 CHURC1Q8WUH1 139 aa10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 TRIB2Q92519 343 aa10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 NUP88Q99567 741 aaPredicted RBP10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 UNC93B1Q9H1C4 597 aa10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 IL25Q9H293 177 aa10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 CWC22Q9HCG8 908 aaKnown RBP10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 PAK6Q9NQU5 681 aaPredicted RBP10.01□□□□□ -0.81
MAP1LC3C-201ENST00000357246 TOMM22Q9NS69 142 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms