RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 TRIML1Q8N9V2 468 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 CTAGE1Q96RT6 745 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 PLIN2Q99541 437 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 CNNM2Q9H8M5 875 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 TMEM94Q12767 1356 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 GSG1L2A8MUP6 293 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 RNF225M0QZC1 329 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 ELF1P32519 619 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 KRT31Q15323 416 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 NBPF9Q3BBW0 867 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 FBXW10Q5XX13 1052 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 NAIF1Q69YI7 327 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 CAGE1Q8TC20 777 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 CHP1Q99653 195 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 VEZTQ9HBM0 779 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 SLC24A3Q9HC58 644 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 PCDH11XQ9BZA7 1347 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 PCDH11YQ9BZA8 1340 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 RGPD5Q99666 1765 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 CYP2D7A0A087X1C5 515 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 ERCC3P19447 782 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 RDXP35241 583 aaKnown RBP9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 BCAMP50895 628 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 EVA1CP58658 441 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 ERVK-24P63145 666 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 DPYDQ12882 1025 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 TSR1Q2NL82 804 aaKnown RBP9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 NT5DC1Q5TFE4 455 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 TTC19Q6DKK2 380 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 KCNV1Q6PIU1 500 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 FMNL3Q8IVF7 1028 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 RIN2Q8WYP3 895 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 PCMTD1Q96MG8 357 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 NAA15Q9BXJ9 866 aaKnown RBP9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 ACBD3Q9H3P7 528 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 FAM204AQ9H8W3 233 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 TTF2Q9UNY4 1162 aaKnown RBP9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 TNKSO95271 1327 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 BAZ2BQ9UIF8 2168 aaKnown RBP9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 MPHOSPH10O00566 681 aaKnown RBP9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 PLEKHA8P1O95397 391 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 KRT2P35908 639 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 IRX1P78414 480 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 PTGDRQ13258 359 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 FKBP15Q5T1M5 1219 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 RASGRP2Q7LDG7 609 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 GSPT2Q8IYD1 628 aaKnown RBP9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 FAXDC2Q96IV6 333 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 ABHD10Q9NUJ1 306 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 MYO6Q9UM54 1294 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 L1RE1Q9UN81 338 aa9.25□□□□□ -0.93
CDC42SE1-201ENST00000357235 LRRIQ3A6PVS8 624 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 POTEB2H3BUK9 544 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 TOM1O60784 492 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 CSF1RP07333 972 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 UQCRFS1P1P0C7P4 283 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 PUM3Q15397 648 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 PIK3AP1Q6ZUJ8 805 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 NLRP10Q86W26 655 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 CCDC148Q8NFR7 591 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 A1CFQ9NQ94 594 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 GDAQ9Y2T3 454 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 ARFGEF2Q9Y6D5 1785 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 NWD2Q9ULI1 1742 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 STK36Q9NRP7 1315 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 TCRBV5S4A2TA0A5A2 114 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 TRIM49BA6NDI0 452 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 STARD3NLO95772 234 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 SLC5A1P13866 664 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 CYP7A1P22680 504 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 NF2P35240 595 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 MRPS25P82663 173 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 CUL4BQ13620 913 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 ZKSCAN8Q15776 578 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 CYP26C1Q6V0L0 522 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 APTXQ7Z2E3 356 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 KIAA1328Q86T90 577 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 TMTC1Q8IUR5 882 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 CTCFLQ8NI51 663 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 NELFBQ8WX92 580 aa9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 BSDC1Q9NW68 430 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 ZBTB12Q9Y330 459 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-201ENST00000357235 KCNJ18B7U540 433 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 PPP1R3GB7ZBB8 358 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 EXOC5O00471 708 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 KCNJ12Q14500 433 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 CCDC122Q5T0U0 273 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 IFIT1BQ5T764 474 aaKnown RBP9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 ZNF579Q8NAF0 562 aaKnown RBP9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 FAM71BQ8TC56 605 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 LPIN2Q92539 896 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 N4BP2L2Q92802 583 aaPredicted RBP9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 JADE2Q9NQC1 790 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 FBXO3Q9UK99 471 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 MACROD2A1Z1Q3 448 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 ERVV-2B6SEH9 535 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 MATR3P43243 847 aaKnown RBP eCLIP9.23□□□□□ -0.934e-6■■□□□ 11.7
CDC42SE1-201ENST00000357235 COPB1P53618 953 aaKnown RBP9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 NLRP5P59047 1200 aa9.23□□□□□ -0.93
CDC42SE1-201ENST00000357235 PPARAQ07869 468 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms