RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 ABCB4P21439 1286 aa16.36■□□□□ 0.21
LMX1B-201ENST00000355497 TPH2Q8IWU9 490 aa16.36■□□□□ 0.21
LMX1B-201ENST00000355497 CFBP00751 764 aa16.36■□□□□ 0.21
LMX1B-201ENST00000355497 BAG5Q9UL15 447 aa16.36■□□□□ 0.21
LMX1B-201ENST00000355497 SGSM2O43147 1006 aa16.36■□□□□ 0.21
LMX1B-201ENST00000355497 MORC3Q14149 939 aa16.36■□□□□ 0.21
LMX1B-201ENST00000355497 ST7Q9NRC1 585 aa16.36■□□□□ 0.21
LMX1B-201ENST00000355497 SPECC1L-ADORA2AF8WAN1 911 aa16.36■□□□□ 0.21
LMX1B-201ENST00000355497 THAP12O43422 761 aa16.36■□□□□ 0.21
LMX1B-201ENST00000355497 OATP04181 439 aa16.36■□□□□ 0.21
LMX1B-201ENST00000355497 GSTA1P08263 222 aa16.36■□□□□ 0.21
LMX1B-201ENST00000355497 GSTA2P09210 222 aa16.36■□□□□ 0.21
LMX1B-201ENST00000355497 DEPTORQ8TB45 409 aa16.36■□□□□ 0.21
LMX1B-201ENST00000355497 STAG1Q8WVM7 1258 aa16.36■□□□□ 0.21
LMX1B-201ENST00000355497 LUC7L3O95232 432 aaKnown RBP16.35■□□□□ 0.21
LMX1B-201ENST00000355497 SCYL2Q6P3W7 929 aa16.35■□□□□ 0.21
LMX1B-201ENST00000355497 RDH13Q8NBN7 331 aa16.35■□□□□ 0.21
LMX1B-201ENST00000355497 CFAP61Q8NHU2 1237 aa16.35■□□□□ 0.21
LMX1B-201ENST00000355497 PCDHB13Q9Y5F0 798 aa16.35■□□□□ 0.21
LMX1B-201ENST00000355497 CYP2J2P51589 502 aa16.35■□□□□ 0.21
LMX1B-201ENST00000355497 PDZD4Q76G19 769 aaPredicted RBP16.35■□□□□ 0.21
LMX1B-201ENST00000355497 REXO1Q8N1G1 1221 aaKnown RBP16.35■□□□□ 0.21
LMX1B-201ENST00000355497 PDZD8Q8NEN9 1154 aa16.35■□□□□ 0.21
LMX1B-201ENST00000355497 OR8K1Q8NGG5 319 aa16.35■□□□□ 0.21
LMX1B-201ENST00000355497 STAMQ92783 540 aa16.35■□□□□ 0.21
LMX1B-201ENST00000355497 NUP160Q12769 1436 aa16.35■□□□□ 0.21
LMX1B-201ENST00000355497 N4BP1O75113 896 aaKnown RBP16.35■□□□□ 0.21
LMX1B-201ENST00000355497 GARSP41250 739 aaKnown RBP16.35■□□□□ 0.21
LMX1B-201ENST00000355497 NSMFQ6X4W1 530 aa16.35■□□□□ 0.21
LMX1B-201ENST00000355497 GPBP1Q86WP2 473 aa16.35■□□□□ 0.21
LMX1B-201ENST00000355497 TSC1Q92574 1164 aa16.35■□□□□ 0.21
LMX1B-201ENST00000355497 ABCC1P33527 1531 aa16.35■□□□□ 0.21
LMX1B-201ENST00000355497 KDM5BQ9UGL1 1544 aa16.35■□□□□ 0.21
LMX1B-201ENST00000355497 FANCAO15360 1455 aa16.35■□□□□ 0.21
LMX1B-201ENST00000355497 PFDN6O15212 129 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 SESN3P58005 492 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 FAM102BQ5T8I3 360 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 MYOCDQ8IZQ8 938 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 CPXCR1Q8N123 301 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 LRGUKQ96M69 825 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 FAF1Q9UNN5 650 aaPredicted RBP16.34■□□□□ 0.21
LMX1B-201ENST00000355497 KBTBD3Q8NAB2 608 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 SPATA5Q8NB90 893 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 OTUD7AQ8TE49 926 aaPredicted RBP16.34■□□□□ 0.21
LMX1B-201ENST00000355497 SH3TC1Q8TE82 1336 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 PDE6CP51160 858 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 NLRX1Q86UT6 975 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 BBOF1Q8ND07 529 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 VPS54Q9P1Q0 977 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 SPDYE16A6NNV3 312 aaPredicted RBP16.34■□□□□ 0.21
LMX1B-201ENST00000355497 ATF2P15336 505 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 SERPINB6P35237 376 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 ATP1A2P50993 1020 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 SPDYE2Q495Y8 402 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 FNBP4Q8N3X1 1017 aaPredicted RBP16.34■□□□□ 0.21
LMX1B-201ENST00000355497 CXorf38Q8TB03 319 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 LPIN2Q92539 896 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 EYA1Q99502 592 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 DPH5Q9H2P9 285 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 BUB1O43683 1085 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 ITKQ08881 620 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 NPATQ14207 1427 aa16.34■□□□□ 0.21
LMX1B-201ENST00000355497 FAM170AA1A519 330 aa16.33■□□□□ 0.21
LMX1B-201ENST00000355497 ZNF277Q9NRM2 450 aaPredicted RBP16.33■□□□□ 0.21
LMX1B-201ENST00000355497 GAS7O60861 476 aa16.33■□□□□ 0.2
LMX1B-201ENST00000355497 SPOUT1Q5T280 376 aaKnown RBP16.33■□□□□ 0.2
LMX1B-201ENST00000355497 PPP1R9AQ9ULJ8 1098 aa16.33■□□□□ 0.2
LMX1B-201ENST00000355497 TRIM37O94972 964 aa16.33■□□□□ 0.2
LMX1B-201ENST00000355497 RFX1P22670 979 aa16.33■□□□□ 0.2
LMX1B-201ENST00000355497 CABLES1Q8TDN4 633 aa16.33■□□□□ 0.2
LMX1B-201ENST00000355497 ZNF594Q96JF6 807 aaPredicted RBP16.33■□□□□ 0.2
LMX1B-201ENST00000355497 TNNC2P02585 160 aa16.33■□□□□ 0.2
LMX1B-201ENST00000355497 MMEL1Q495T6 779 aa16.33■□□□□ 0.2
LMX1B-201ENST00000355497 GOLGA5Q8TBA6 731 aa16.33■□□□□ 0.2
LMX1B-201ENST00000355497 ANO3Q9BYT9 981 aa16.33■□□□□ 0.2
LMX1B-201ENST00000355497 BCL2L12Q9HB09 334 aa16.33■□□□□ 0.2
LMX1B-201ENST00000355497 PPP2R2CQ9Y2T4 447 aa16.33■□□□□ 0.2
LMX1B-201ENST00000355497 CUL7Q14999 1698 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 ZBTB24O43167 697 aaPredicted RBP16.32■□□□□ 0.2
LMX1B-201ENST00000355497 ATF7P17544 494 aaPredicted RBP16.32■□□□□ 0.2
LMX1B-201ENST00000355497 HOXC9P31274 260 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 SNCBQ16143 134 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 SPDL1Q96EA4 605 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 XAB2Q9HCS7 855 aaKnown RBP16.32■□□□□ 0.2
LMX1B-201ENST00000355497 LMBRD1Q9NUN5 540 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 LARSQ9P2J5 1176 aaKnown RBP16.32■□□□□ 0.2
LMX1B-201ENST00000355497 TPX2Q9ULW0 747 aaKnown RBP16.32■□□□□ 0.2
LMX1B-201ENST00000355497 PPME1Q9Y570 386 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 YTHDC2Q9H6S0 1430 aaKnown RBP16.32■□□□□ 0.2
LMX1B-201ENST00000355497 ZNF532Q9HCE3 1301 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 SMCO2A6NFE2 343 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 CAPN9O14815 690 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 TTC4O95801 387 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 CAPN12Q6ZSI9 719 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 G2E3Q7L622 706 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 LRRC8CQ8TDW0 803 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 EFCAB8A8MWE9 144 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 JAK2O60674 1132 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 C1orf112Q9NSG2 853 aa16.32■□□□□ 0.2
LMX1B-201ENST00000355497 MROH5Q6ZUA9 1318 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms