RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 ZBTB24O43167 697 aaPredicted RBP19.91■□□□□ 0.78
COL18A1-202ENST00000355480 CHRNDQ07001 517 aa19.91■□□□□ 0.78
COL18A1-202ENST00000355480 SRGAP1Q7Z6B7 1085 aa19.91■□□□□ 0.78
COL18A1-202ENST00000355480 MYOCDQ8IZQ8 938 aa19.91■□□□□ 0.78
COL18A1-202ENST00000355480 TSKSQ9UJT2 592 aa19.91■□□□□ 0.78
COL18A1-202ENST00000355480 CD2APQ9Y5K6 639 aa19.91■□□□□ 0.78
COL18A1-202ENST00000355480 KIAA0232Q92628 1395 aa19.9■□□□□ 0.78
COL18A1-202ENST00000355480 CFAP221Q4G0U5 840 aa19.9■□□□□ 0.78
COL18A1-202ENST00000355480 MYSM1Q5VVJ2 828 aa19.9■□□□□ 0.78
COL18A1-202ENST00000355480 SDCCAG8Q86SQ7 713 aaPredicted RBP19.9■□□□□ 0.78
COL18A1-202ENST00000355480 MAST1Q9Y2H9 1570 aa19.9■□□□□ 0.78
COL18A1-202ENST00000355480 NPC1L1Q9UHC9 1359 aa19.9■□□□□ 0.78
COL18A1-202ENST00000355480 CEP85LQ5SZL2 805 aa19.9■□□□□ 0.78
COL18A1-202ENST00000355480 MCF2L2Q86YR7 1114 aa19.9■□□□□ 0.78
COL18A1-202ENST00000355480 U2AF1L4Q8WU68 220 aaKnown RBP19.9■□□□□ 0.78
COL18A1-202ENST00000355480 IFIH1Q9BYX4 1025 aaKnown RBP19.9■□□□□ 0.78
COL18A1-202ENST00000355480 PLEKHG3A1L390 1219 aa19.9■□□□□ 0.78
COL18A1-202ENST00000355480 KLRF2D3W0D1 207 aa19.9■□□□□ 0.78
COL18A1-202ENST00000355480 ME3Q16798 604 aa19.9■□□□□ 0.78
COL18A1-202ENST00000355480 TNKSO95271 1327 aa19.9■□□□□ 0.78
COL18A1-202ENST00000355480 NR1I2O75469 434 aa19.9■□□□□ 0.78
COL18A1-202ENST00000355480 NEDD9Q14511 834 aa19.9■□□□□ 0.78
COL18A1-202ENST00000355480 SLFN12Q8IYM2 578 aa19.9■□□□□ 0.78
COL18A1-202ENST00000355480 TACC3Q9Y6A5 838 aa19.9■□□□□ 0.78
COL18A1-202ENST00000355480 NOSTRINQ8IVI9 506 aa19.89■□□□□ 0.78
COL18A1-202ENST00000355480 RPUSD2Q8IZ73 545 aaKnown RBP19.89■□□□□ 0.78
COL18A1-202ENST00000355480 FANCBQ8NB91 859 aa19.89■□□□□ 0.78
COL18A1-202ENST00000355480 MAIP1Q8WWC4 291 aa19.89■□□□□ 0.78
COL18A1-202ENST00000355480 CNKSR1Q969H4 720 aa19.89■□□□□ 0.78
COL18A1-202ENST00000355480 TM6SF1Q9BZW5 370 aa19.89■□□□□ 0.78
COL18A1-202ENST00000355480 K7ENM7 598 aa19.89■□□□□ 0.77
COL18A1-202ENST00000355480 GKAP1Q5VSY0 366 aaPredicted RBP19.89■□□□□ 0.77
COL18A1-202ENST00000355480 USPL1Q5W0Q7 1092 aa19.89■□□□□ 0.77
COL18A1-202ENST00000355480 ZNF274Q96GC6 653 aaPredicted RBP19.89■□□□□ 0.77
COL18A1-202ENST00000355480 ADPGKQ9BRR6 497 aa19.89■□□□□ 0.77
COL18A1-202ENST00000355480 SUGCTQ9HAC7 445 aa19.89■□□□□ 0.77
COL18A1-202ENST00000355480 ABL1P00519 1130 aa19.89■□□□□ 0.77
COL18A1-202ENST00000355480 KRT15P19012 456 aa19.89■□□□□ 0.77
COL18A1-202ENST00000355480 MAN1A1P33908 653 aa19.89■□□□□ 0.77
COL18A1-202ENST00000355480 STAT1P42224 750 aa19.89■□□□□ 0.77
COL18A1-202ENST00000355480 MMS19Q96T76 1030 aa19.89■□□□□ 0.77
COL18A1-202ENST00000355480 PALM3A6NDB9 673 aaPredicted RBP19.89■□□□□ 0.77
COL18A1-202ENST00000355480 TNNC2P02585 160 aa19.89■□□□□ 0.77
COL18A1-202ENST00000355480 PCCAP05165 728 aaPredicted RBP19.89■□□□□ 0.77
COL18A1-202ENST00000355480 SLC12A2P55011 1212 aa19.89■□□□□ 0.77
COL18A1-202ENST00000355480 A0A0D9SFI3 127 aa19.89■□□□□ 0.77
COL18A1-202ENST00000355480 EPSTI1Q96J88 318 aa19.89■□□□□ 0.77
COL18A1-202ENST00000355480 THRAP3Q9Y2W1 955 aaKnown RBP19.89■□□□□ 0.77
COL18A1-202ENST00000355480 WDR62O43379 1518 aa19.88■□□□□ 0.77
COL18A1-202ENST00000355480 CROCCP2Q86T23 111 aa19.88■□□□□ 0.77
COL18A1-202ENST00000355480 RUFY4Q6ZNE9 571 aa19.88■□□□□ 0.77
COL18A1-202ENST00000355480 EP400NLQ6ZTU2 488 aa19.88■□□□□ 0.77
COL18A1-202ENST00000355480 GPKOWQ92917 476 aaPredicted RBP eCLIP19.88■□□□□ 0.773e-6■■■■□ 20.9
COL18A1-202ENST00000355480 LRRC24Q50LG9 513 aa19.88■□□□□ 0.77
COL18A1-202ENST00000355480 NEK8Q86SG6 692 aa19.88■□□□□ 0.77
COL18A1-202ENST00000355480 ZNF710Q8N1W2 664 aa19.88■□□□□ 0.77
COL18A1-202ENST00000355480 IL17REQ8NFR9 667 aa19.88■□□□□ 0.77
COL18A1-202ENST00000355480 VPS37BQ9H9H4 285 aa19.88■□□□□ 0.77
COL18A1-202ENST00000355480 GOLGA6CA6NDK9 693 aa19.88■□□□□ 0.77
COL18A1-202ENST00000355480 HGSO14964 777 aaPredicted RBP19.88■□□□□ 0.77
COL18A1-202ENST00000355480 GOLGA6DP0CG33 693 aa19.88■□□□□ 0.77
COL18A1-202ENST00000355480 PAK2Q13177 524 aa19.88■□□□□ 0.77
COL18A1-202ENST00000355480 SCYL2Q6P3W7 929 aa19.88■□□□□ 0.77
COL18A1-202ENST00000355480 TEKT3Q9BXF9 490 aa19.88■□□□□ 0.77
COL18A1-202ENST00000355480 GOLGA6AQ9NYA3 693 aa19.88■□□□□ 0.77
COL18A1-202ENST00000355480 DDX25Q9UHL0 483 aaKnown RBP19.88■□□□□ 0.77
COL18A1-202ENST00000355480 TBC1D8O95759 1140 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 CUL4BQ13620 913 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 CAPN9O14815 690 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 ABCB4P21439 1286 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 LONRF2Q1L5Z9 754 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 IQCDQ96DY2 449 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 USP44Q9H0E7 712 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 TMEM232C9JQI7 657 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 I3L4J1 428 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 NDUFAB1O14561 156 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 PFKFB1P16118 471 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 ZNF131P52739 623 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 KRT81Q14533 505 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 EAF2Q96CJ1 260 aaPredicted RBP19.87■□□□□ 0.77
COL18A1-202ENST00000355480 CTTNBP2Q8WZ74 1663 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 SLFN13Q68D06 897 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 PLA2G4DQ86XP0 818 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 FAM193BQ96PV7 902 aaPredicted RBP19.87■□□□□ 0.77
COL18A1-202ENST00000355480 AMFRQ9UKV5 643 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 TMEM2Q9UHN6 1383 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 OR52Z1P0C646 297 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 HSPD1P10809 573 aaKnown RBP19.87■□□□□ 0.77
COL18A1-202ENST00000355480 SCG2P13521 617 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 ATF7P17544 494 aaPredicted RBP19.87■□□□□ 0.77
COL18A1-202ENST00000355480 PANK4Q9NVE7 773 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 ZMYM6O95789 1325 aa19.87■□□□□ 0.77
COL18A1-202ENST00000355480 PPARDQ03181 441 aa19.86■□□□□ 0.77
COL18A1-202ENST00000355480 RSAD2Q8WXG1 361 aa19.86■□□□□ 0.77
COL18A1-202ENST00000355480 OGFRQ9NZT2 677 aa19.86■□□□□ 0.77
COL18A1-202ENST00000355480 ADALQ6DHV7 355 aa19.86■□□□□ 0.77
COL18A1-202ENST00000355480 NLGN1Q8N2Q7 840 aa19.86■□□□□ 0.77
COL18A1-202ENST00000355480 ATP7AQ04656 1500 aa19.86■□□□□ 0.77
COL18A1-202ENST00000355480 KCNJ18B7U540 433 aa19.86■□□□□ 0.77
COL18A1-202ENST00000355480 ATP11AP98196 1134 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms