RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PLCH1Q4KWH8 1693 aa22.15■■□□□ 1.14
COL13A1-201ENST00000354547 NOL10Q9BSC4 688 aaKnown RBP22.15■■□□□ 1.14
COL13A1-201ENST00000354547 CPVLQ9H3G5 476 aa22.15■■□□□ 1.14
COL13A1-201ENST00000354547 FHOD1Q9Y613 1164 aa22.15■■□□□ 1.14
COL13A1-201ENST00000354547 FAM205AQ6ZU69 1335 aa22.15■■□□□ 1.14
COL13A1-201ENST00000354547 DIXDC1Q155Q3 683 aa22.15■■□□□ 1.14
COL13A1-201ENST00000354547 PFKFB3Q16875 520 aaPredicted RBP22.15■■□□□ 1.14
COL13A1-201ENST00000354547 RCSD1Q6JBY9 416 aa22.15■■□□□ 1.14
COL13A1-201ENST00000354547 SLC44A5Q8NCS7 719 aa22.15■■□□□ 1.14
COL13A1-201ENST00000354547 ARGLU1Q9NWB6 273 aaPredicted RBP22.15■■□□□ 1.14
COL13A1-201ENST00000354547 GOLGA6L9A6NEM1 432 aa22.14■■□□□ 1.13
COL13A1-201ENST00000354547 FGRP09769 529 aa22.14■■□□□ 1.13
COL13A1-201ENST00000354547 KRT31Q15323 416 aa22.14■■□□□ 1.13
COL13A1-201ENST00000354547 SRRTQ9BXP5 876 aaKnown RBP22.14■■□□□ 1.13
COL13A1-201ENST00000354547 MKNK2Q9HBH9 465 aa22.14■■□□□ 1.13
COL13A1-201ENST00000354547 EFCAB8A8MWE9 144 aa22.14■■□□□ 1.13
COL13A1-201ENST00000354547 PNMA6AP0CW24 399 aaPredicted RBP22.14■■□□□ 1.13
COL13A1-201ENST00000354547 CDKAL1Q5VV42 579 aa22.14■■□□□ 1.13
COL13A1-201ENST00000354547 RASGRP2Q7LDG7 609 aa22.14■■□□□ 1.13
COL13A1-201ENST00000354547 ACRBPQ8NEB7 543 aa22.14■■□□□ 1.13
COL13A1-201ENST00000354547 ANKIB1Q9P2G1 1089 aa22.14■■□□□ 1.13
COL13A1-201ENST00000354547 STX8Q9UNK0 236 aa22.14■■□□□ 1.13
COL13A1-201ENST00000354547 ORC4O43929 436 aa22.13■■□□□ 1.13
COL13A1-201ENST00000354547 GOLGA8HP0CJ92 632 aa22.13■■□□□ 1.13
COL13A1-201ENST00000354547 MAP3K9P80192 1104 aa22.13■■□□□ 1.13
COL13A1-201ENST00000354547 E2F4Q16254 413 aa22.13■■□□□ 1.13
COL13A1-201ENST00000354547 PNMA1Q8ND90 353 aa22.13■■□□□ 1.13
COL13A1-201ENST00000354547 KIFC2Q96AC6 838 aa22.13■■□□□ 1.13
COL13A1-201ENST00000354547 ATP8A2Q9NTI2 1148 aa22.13■■□□□ 1.13
COL13A1-201ENST00000354547 SAP30BPQ9UHR5 308 aaKnown RBP22.13■■□□□ 1.13
COL13A1-201ENST00000354547 PUF60Q9UHX1 559 aaKnown RBP22.13■■□□□ 1.13
COL13A1-201ENST00000354547 ADGRG1Q9Y653 693 aa22.13■■□□□ 1.13
COL13A1-201ENST00000354547 ABL1P00519 1130 aa22.13■■□□□ 1.13
COL13A1-201ENST00000354547 TFRCP02786 760 aaKnown RBP22.13■■□□□ 1.13
COL13A1-201ENST00000354547 NELFBQ8WX92 580 aa22.13■■□□□ 1.13
COL13A1-201ENST00000354547 NUP88Q99567 741 aaPredicted RBP22.13■■□□□ 1.13
COL13A1-201ENST00000354547 COL16A1Q07092 1604 aaPredicted RBP22.13■■□□□ 1.13
COL13A1-201ENST00000354547 GNPATO15228 680 aa22.12■■□□□ 1.13
COL13A1-201ENST00000354547 GYPCP04921 128 aa22.12■■□□□ 1.13
COL13A1-201ENST00000354547 STAT6P42226 847 aa22.12■■□□□ 1.13
COL13A1-201ENST00000354547 TYW1BQ6NUM6 668 aa22.12■■□□□ 1.13
COL13A1-201ENST00000354547 HEATR3Q7Z4Q2 680 aa22.12■■□□□ 1.13
COL13A1-201ENST00000354547 BLIDQ8IZY5 108 aa22.12■■□□□ 1.13
COL13A1-201ENST00000354547 IL17RBQ9NRM6 502 aa22.12■■□□□ 1.13
COL13A1-201ENST00000354547 THRAP3Q9Y2W1 955 aaKnown RBP22.12■■□□□ 1.13
COL13A1-201ENST00000354547 MRFAP1Q9Y605 127 aa22.12■■□□□ 1.13
COL13A1-201ENST00000354547 TRIM49BA6NDI0 452 aa22.12■■□□□ 1.13
COL13A1-201ENST00000354547 RNF225M0QZC1 329 aaPredicted RBP22.12■■□□□ 1.13
COL13A1-201ENST00000354547 ZPR1O75312 459 aa22.12■■□□□ 1.13
COL13A1-201ENST00000354547 KIF5BP33176 963 aa22.12■■□□□ 1.13
COL13A1-201ENST00000354547 ZNF569Q5MCW4 686 aa22.12■■□□□ 1.13
COL13A1-201ENST00000354547 PDXDC2PQ6P474 469 aa22.12■■□□□ 1.13
COL13A1-201ENST00000354547 PANX2Q96RD6 677 aa22.12■■□□□ 1.13
COL13A1-201ENST00000354547 CTAGE1Q96RT6 745 aa22.12■■□□□ 1.13
COL13A1-201ENST00000354547 POLR3GO15318 223 aaPredicted RBP22.12■■□□□ 1.13
COL13A1-201ENST00000354547 MFAP3LO75121 409 aa22.12■■□□□ 1.13
COL13A1-201ENST00000354547 GABPB1Q06547 395 aaPredicted RBP22.12■■□□□ 1.13
COL13A1-201ENST00000354547 TERF2Q15554 542 aa22.12■■□□□ 1.13
COL13A1-201ENST00000354547 ARPP21Q9UBL0 812 aaPredicted RBP22.12■■□□□ 1.13
COL13A1-201ENST00000354547 SPATA31A5Q5VU36 1347 aa22.11■■□□□ 1.13
COL13A1-201ENST00000354547 SPATA31A7Q8IWB4 1347 aa22.11■■□□□ 1.13
COL13A1-201ENST00000354547 PAK1Q13153 545 aa22.11■■□□□ 1.13
COL13A1-201ENST00000354547 GRIK5Q16478 980 aa22.11■■□□□ 1.13
COL13A1-201ENST00000354547 INF2Q27J81 1249 aa22.11■■□□□ 1.13
COL13A1-201ENST00000354547 SH3RF3Q8TEJ3 882 aaPredicted RBP22.11■■□□□ 1.13
COL13A1-201ENST00000354547 CCDC194A0A1B0GVG4 234 aa22.11■■□□□ 1.13
COL13A1-201ENST00000354547 ERICH4A6NGS2 130 aa22.11■■□□□ 1.13
COL13A1-201ENST00000354547 PCP11498 1178 aaKnown RBP22.11■■□□□ 1.13
COL13A1-201ENST00000354547 RPN1P04843 607 aaKnown RBP22.1■■□□□ 1.13
COL13A1-201ENST00000354547 TPM1P09493 284 aa22.1■■□□□ 1.13
COL13A1-201ENST00000354547 PRCPP42785 496 aa22.1■■□□□ 1.13
COL13A1-201ENST00000354547 TGFBRAP1Q8WUH2 860 aa22.1■■□□□ 1.13
COL13A1-201ENST00000354547 PIP4K2BP78356 416 aa22.09■■□□□ 1.13
COL13A1-201ENST00000354547 AMIGO3Q86WK7 504 aa22.09■■□□□ 1.13
COL13A1-201ENST00000354547 TMEM60Q9H2L4 133 aa22.09■■□□□ 1.13
COL13A1-201ENST00000354547 KCNJ18B7U540 433 aa22.09■■□□□ 1.13
COL13A1-201ENST00000354547 GTPBP6O43824 516 aaPredicted RBP22.09■■□□□ 1.13
COL13A1-201ENST00000354547 KIF5CO60282 957 aa22.09■■□□□ 1.13
COL13A1-201ENST00000354547 TSPY3P0CV98 308 aa22.09■■□□□ 1.13
COL13A1-201ENST00000354547 TSPY8P0CW00 308 aa22.09■■□□□ 1.13
COL13A1-201ENST00000354547 TXLNAP40222 546 aa22.09■■□□□ 1.13
COL13A1-201ENST00000354547 PBX1P40424 430 aa22.09■■□□□ 1.13
COL13A1-201ENST00000354547 KCNJ12Q14500 433 aa22.09■■□□□ 1.13
COL13A1-201ENST00000354547 SEMA3EO15041 775 aa22.09■■□□□ 1.13
COL13A1-201ENST00000354547 PLA2G4AP47712 749 aa22.09■■□□□ 1.13
COL13A1-201ENST00000354547 COPB1P53618 953 aaKnown RBP22.09■■□□□ 1.13
COL13A1-201ENST00000354547 UBXN1Q04323 297 aa22.09■■□□□ 1.13
COL13A1-201ENST00000354547 KIF4BQ2VIQ3 1234 aa22.09■■□□□ 1.13
COL13A1-201ENST00000354547 MAPKAPK5Q8IW41 473 aa22.09■■□□□ 1.13
COL13A1-201ENST00000354547 ANKRD2Q9GZV1 360 aa22.09■■□□□ 1.13
COL13A1-201ENST00000354547 FAM53CQ9NYF3 392 aa22.09■■□□□ 1.13
COL13A1-201ENST00000354547 LDHBP07195 334 aaKnown RBP22.08■■□□□ 1.13
COL13A1-201ENST00000354547 TPTE2Q6XPS3 522 aa22.08■■□□□ 1.13
COL13A1-201ENST00000354547 ROBO1Q9Y6N7 1651 aa22.08■■□□□ 1.13
COL13A1-201ENST00000354547 SLF1Q9BQI6 1058 aa22.08■■□□□ 1.12
COL13A1-201ENST00000354547 PARD6BQ9BYG5 372 aa22.08■■□□□ 1.12
COL13A1-201ENST00000354547 VAT1LQ9HCJ6 419 aa22.08■■□□□ 1.12
COL13A1-201ENST00000354547 CALML3P27482 149 aa22.07■■□□□ 1.12
COL13A1-201ENST00000354547 DTHD1Q6ZMT9 781 aa22.07■■□□□ 1.12
COL13A1-201ENST00000354547 CNGA4Q8IV77 575 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms