RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 MIEF2Q96C03 454 aa8.54□□□□□ -1.04
BRCA1-201ENST00000352993 CCDC43Q96MW1 224 aaKnown RBP8.54□□□□□ -1.04
BRCA1-201ENST00000352993 SMARCAL1Q9NZC9 954 aa8.54□□□□□ -1.04
BRCA1-201ENST00000352993 CEP126Q9P2H0 1117 aa8.54□□□□□ -1.04
BRCA1-201ENST00000352993 FBXO2Q9UK22 296 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-201ENST00000352993 GRIN2DO15399 1336 aa8.54□□□□□ -1.04
BRCA1-201ENST00000352993 BRWD3Q6RI45 1802 aa8.54□□□□□ -1.04
BRCA1-201ENST00000352993 TTC26A0AVF1 554 aa8.54□□□□□ -1.04
BRCA1-201ENST00000352993 GPAA1O43292 621 aa8.54□□□□□ -1.04
BRCA1-201ENST00000352993 PAFAH1B1P43034 410 aa8.54□□□□□ -1.04
BRCA1-201ENST00000352993 SPA17Q15506 151 aa8.54□□□□□ -1.04
BRCA1-201ENST00000352993 RILPL1Q5EBL4 403 aa8.54□□□□□ -1.04
BRCA1-201ENST00000352993 NAIF1Q69YI7 327 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-201ENST00000352993 MAGEC2Q9UBF1 373 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-201ENST00000352993 DUSP10Q9Y6W6 482 aa8.54□□□□□ -1.04
BRCA1-201ENST00000352993 RREB1Q92766 1687 aa8.54□□□□□ -1.04
BRCA1-201ENST00000352993 GOLGA6L10A6NI86 522 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 PSMD14O00487 310 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 PPP1R12BO60237 982 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 PDHBP11177 359 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 LSP1P33241 339 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 SARSP49591 514 aaKnown RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 VAV2P52735 878 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 SPAG1Q07617 926 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 LRRC24Q50LG9 513 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 NAA35Q5VZE5 725 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 SMCR8Q8TEV9 937 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 WASF1Q92558 559 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 TBC1D31Q96DN5 1066 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 RNPC3Q96LT9 517 aaKnown RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 ZKSCAN3Q9BRR0 538 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 PUS7LQ9H0K6 701 aaKnown RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 INCENPQ9NQS7 918 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 COL24A1Q17RW2 1714 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 TNS1Q9HBL0 1735 aaKnown RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 RFX7Q2KHR2 1363 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 ACTN4O43707 911 aaKnown RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 ZPR1O75312 459 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 SKAP2O75563 359 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 IDH1O75874 414 aaKnown RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 RFX5P48382 616 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 SARNPP82979 210 aaKnown RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 TRIM14Q14142 442 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 TTMPQ5BVD1 217 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 C8orf74Q6P047 294 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 CYB5R4Q7L1T6 521 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 SPATS2Q86XZ4 545 aaKnown RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 CCDC13Q8IYE1 715 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 TSEN2Q8NCE0 465 aaKnown RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 ZNF473Q8WTR7 871 aaKnown RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 NELFBQ8WX92 580 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 PAGE5Q96GU1 130 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 UBAC1Q9BSL1 405 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 CARD10Q9BWT7 1032 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 SLC40A1Q9NP59 571 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 VPS54Q9P1Q0 977 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 ZNF330Q9Y3S2 320 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 FAM237AA0A1B0GTK4 181 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 GUCY1A2P33402 732 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 PEX19P40855 299 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 RNASE9P60153 205 aaKnown RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 HDLBPQ00341 1268 aaKnown RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 BIRC2Q13490 618 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 APTXQ7Z2E3 356 aaKnown RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 FMNL3Q8IVF7 1028 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 TRIM6Q9C030 488 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 REXO2Q9Y3B8 237 aaKnown RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 TBX22Q9Y458 520 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 UTYO14607 1347 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 UBN2Q6ZU65 1347 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 ZC3H4Q9UPT8 1303 aaKnown RBP8.53□□□□□ -1.04
BRCA1-201ENST00000352993 TMEM94Q12767 1356 aa8.53□□□□□ -1.04
BRCA1-201ENST00000352993 A6NNZ2 444 aa8.52□□□□□ -1.04
BRCA1-201ENST00000352993 FSBPO95073 299 aa8.52□□□□□ -1.04
BRCA1-201ENST00000352993 GCFC2P16383 781 aaKnown RBP8.52□□□□□ -1.04
BRCA1-201ENST00000352993 TOB1P50616 345 aaPredicted RBP8.52□□□□□ -1.04
BRCA1-201ENST00000352993 EPHB4P54760 987 aa8.52□□□□□ -1.04
BRCA1-201ENST00000352993 PAK1Q13153 545 aa8.52□□□□□ -1.04
BRCA1-201ENST00000352993 TUBB8Q3ZCM7 444 aa8.52□□□□□ -1.04
BRCA1-201ENST00000352993 SYMPKQ92797 1274 aaKnown RBP8.52□□□□□ -1.04
BRCA1-201ENST00000352993 ZIM3Q96PE6 472 aa8.52□□□□□ -1.04
BRCA1-201ENST00000352993 CCT8L2Q96SF2 557 aa8.52□□□□□ -1.04
BRCA1-201ENST00000352993 LACRTQ9GZZ8 138 aa8.52□□□□□ -1.04
BRCA1-201ENST00000352993 EHD2Q9NZN4 543 aa8.52□□□□□ -1.04
BRCA1-201ENST00000352993 PXDNQ92626 1479 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 ESYT3A0FGR9 886 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 TRIM75PA6NK02 468 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 BACH1O14867 736 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 RANBP6O60518 1105 aaKnown RBP8.52□□□□□ -1.05
BRCA1-201ENST00000352993 USO1O60763 962 aaKnown RBP8.52□□□□□ -1.05
BRCA1-201ENST00000352993 TACC1O75410 805 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 NR1D1P20393 614 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 GCKP35557 465 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 PBX1P40424 430 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 FNTAP49354 379 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 HLTFQ14527 1009 aaKnown RBP eCLIP8.52□□□□□ -1.053e-6■■□□□ 13.4
BRCA1-201ENST00000352993 ZNF174Q15697 407 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 PI16Q6UXB8 463 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 NLRP14Q86W24 1093 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 AENQ8WTP8 325 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms