RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 MKL1Q969V6 931 aa13.59□□□□□ -0.23
CTNNB1-201ENST00000349496 UBE2OQ9C0C9 1292 aaKnown RBP13.59□□□□□ -0.23
CTNNB1-201ENST00000349496 TMCC1O94876 653 aa13.59□□□□□ -0.23
CTNNB1-201ENST00000349496 GKAP1Q5VSY0 366 aaPredicted RBP13.59□□□□□ -0.23
CTNNB1-201ENST00000349496 TLDC1Q6P9B6 456 aa13.59□□□□□ -0.23
CTNNB1-201ENST00000349496 SLF2Q8IX21 1173 aa13.59□□□□□ -0.23
CTNNB1-201ENST00000349496 CCDC8Q9H0W5 538 aaPredicted RBP13.59□□□□□ -0.23
CTNNB1-201ENST00000349496 STK38LQ9Y2H1 464 aa13.59□□□□□ -0.23
CTNNB1-201ENST00000349496 ARHGAP6O43182 974 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 CBFA2T2O43439 604 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 CHMLP26374 656 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 PLCB4Q15147 1175 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 CAPN12Q6ZSI9 719 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 LCA5Q86VQ0 697 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 ESYT1Q9BSJ8 1104 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 ANKZF1Q9H8Y5 726 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 CFAP45Q9UL16 551 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 SBNO1A3KN83 1393 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 ATP5JP18859 108 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 ALDH3A1P30838 453 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 SEC24CP53992 1094 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 G3BP1Q13283 466 aaKnown RBP eCLIP13.58□□□□□ -0.241e-9■■■□□ 17.2
CTNNB1-201ENST00000349496 NAA35Q5VZE5 725 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 MTHFD1LQ6UB35 978 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 C14orf80Q86SX3 495 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 NUP58Q9BVL2 599 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 ANKRD26Q9UPS8 1709 aa13.58□□□□□ -0.24
CTNNB1-201ENST00000349496 IFIT2P09913 472 aaKnown RBP13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 FUT4P22083 530 aa13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 ATP8B2P98198 1209 aa13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 FAAH2Q6GMR7 532 aa13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 GSPT2Q8IYD1 628 aaKnown RBP13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 RASEFQ8IZ41 740 aa13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 PRELID1Q9Y255 219 aa13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 TMA7Q9Y2S6 64 aaKnown RBP13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 CAPZA3Q96KX2 299 aa13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 OSBPL5Q9H0X9 879 aaPredicted RBP13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 CWC25Q9NXE8 425 aaPredicted RBP13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 LIMCH1Q9UPQ0 1083 aa13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 TUFMP49411 452 aaKnown RBP13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 NUGGCQ68CJ6 796 aa13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 TRIM65Q6PJ69 517 aa13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 ZNF473Q8WTR7 871 aaKnown RBP13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 FAM114A2Q9NRY5 505 aa13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 MAP3K2Q9Y2U5 619 aa13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 RGPD8O14715 1765 aaPredicted RBP13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 SETD1AO15047 1707 aaKnown RBP13.57□□□□□ -0.24
CTNNB1-201ENST00000349496 ATP6V1G2O95670 118 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 GUCY1A3Q02108 690 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 CDC37Q16543 378 aaPredicted RBP13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 ZNF394Q53GI3 561 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 CACNA2D3Q8IZS8 1091 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 PIDD1Q9HB75 910 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 ATP8A1Q9Y2Q0 1164 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 P4HA2O15460 535 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 SYF2O95926 243 aaKnown RBP13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 PDCP20941 246 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 LMBRD2Q68DH5 695 aaPredicted RBP13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 BICDL1Q6ZP65 573 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 BRAPQ7Z569 592 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 CPLX3Q8WVH0 158 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 TLR7Q9NYK1 1049 aaKnown RBP13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 C9orf78Q9NZ63 289 aaPredicted RBP13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 ZNF330Q9Y3S2 320 aaPredicted RBP13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 TBX22Q9Y458 520 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 GOLGA8KD6RF30 607 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 SLC4A8Q2Y0W8 1093 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 P3H1Q32P28 736 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 CCHCR1Q8TD31 782 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 HPCAL4Q9UM19 191 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 THRAP3Q9Y2W1 955 aaKnown RBP13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 PLEKHG1Q9ULL1 1385 aa13.56□□□□□ -0.24
CTNNB1-201ENST00000349496 DPPA5A6NC42 116 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 LINGO3P0C6S8 592 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 ALDH1B1P30837 517 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 HDLBPQ00341 1268 aaKnown RBP13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 C8orf76Q96K31 380 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 MPHOSPH6Q99547 160 aaKnown RBP13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 DLGAP2Q9P1A6 1054 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 TMEM98Q9Y2Y6 226 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 GFPT2O94808 682 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 GNAT2P19087 354 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 ME1P48163 572 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 EIF4A1P60842 406 aaKnown RBP13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 PUS10Q3MIT2 529 aaKnown RBP13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 WDR78Q5VTH9 848 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 KCTD17Q8N5Z5 321 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 RHPN1Q8TCX5 695 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 FBF1Q8TES7 1133 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 CCT8L2Q96SF2 557 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 NDNQ99608 321 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 ABCF3Q9NUQ8 709 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 TAF6LQ9Y6J9 622 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 FLOT1O75955 427 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 MLH1P40692 756 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 PSMD7P51665 324 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 KLC1Q07866 573 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 TMEM154Q6P9G4 183 aa13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 SREK1Q8WXA9 508 aaKnown RBP13.55□□□□□ -0.24
CTNNB1-201ENST00000349496 F8VZ95 297 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms