RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 CMTR1Q8N1G2 835 aaKnown RBP31.49■■■□□ 2.63
SSBP4-202ENST00000348495 SRBD1Q8N5C6 995 aaKnown RBP31.49■■■□□ 2.63
SSBP4-202ENST00000348495 RBM46Q8TBY0 533 aaKnown RBP31.49■■■□□ 2.63
SSBP4-202ENST00000348495 FEZ1Q99689 392 aa31.49■■■□□ 2.63
SSBP4-202ENST00000348495 SMC3Q9UQE7 1217 aa31.49■■■□□ 2.63
SSBP4-202ENST00000348495 TOMM70O94826 608 aa31.48■■■□□ 2.63
SSBP4-202ENST00000348495 SLC1A4P43007 532 aa31.48■■■□□ 2.63
SSBP4-202ENST00000348495 PPATQ06203 517 aa31.48■■■□□ 2.63
SSBP4-202ENST00000348495 MTMR2Q13614 643 aa31.48■■■□□ 2.63
SSBP4-202ENST00000348495 CNKSR2Q8WXI2 1034 aa31.48■■■□□ 2.63
SSBP4-202ENST00000348495 LZTS2Q9BRK4 669 aa31.48■■■□□ 2.63
SSBP4-202ENST00000348495 FRMPD2Q68DX3 1309 aaPredicted RBP31.47■■■□□ 2.63
SSBP4-202ENST00000348495 DDIT3P35638 169 aa31.47■■■□□ 2.63
SSBP4-202ENST00000348495 SLC35G1Q2M3R5 365 aa31.47■■■□□ 2.63
SSBP4-202ENST00000348495 GPATCH4Q5T3I0 446 aaKnown RBP31.47■■■□□ 2.63
SSBP4-202ENST00000348495 CWC22Q9HCG8 908 aaKnown RBP31.47■■■□□ 2.63
SSBP4-202ENST00000348495 KLRF2D3W0D1 207 aa31.46■■■□□ 2.63
SSBP4-202ENST00000348495 GJB2P29033 226 aa31.46■■■□□ 2.63
SSBP4-202ENST00000348495 SPICE1Q8N0Z3 855 aa31.46■■■□□ 2.63
SSBP4-202ENST00000348495 LPAR1Q92633 364 aa31.46■■■□□ 2.63
SSBP4-202ENST00000348495 PHKBQ93100 1093 aa31.46■■■□□ 2.63
SSBP4-202ENST00000348495 TRIM75PA6NK02 468 aa31.46■■■□□ 2.63
SSBP4-202ENST00000348495 RAD21O60216 631 aa31.46■■■□□ 2.63
SSBP4-202ENST00000348495 FDPSP14324 419 aaKnown RBP31.46■■■□□ 2.63
SSBP4-202ENST00000348495 SMARCA1P28370 1054 aa31.46■■■□□ 2.63
SSBP4-202ENST00000348495 USP14P54578 494 aa31.46■■■□□ 2.63
SSBP4-202ENST00000348495 HMGN5P82970 282 aaKnown RBP31.46■■■□□ 2.63
SSBP4-202ENST00000348495 ZYXQ15942 572 aaKnown RBP31.46■■■□□ 2.63
SSBP4-202ENST00000348495 EMILIN3Q9NT22 766 aa31.46■■■□□ 2.63
SSBP4-202ENST00000348495 CNTNAP5Q8WYK1 1306 aa31.45■■■□□ 2.63
SSBP4-202ENST00000348495 STK36Q9NRP7 1315 aa31.45■■■□□ 2.63
SSBP4-202ENST00000348495 PPFIA3O75145 1194 aa31.45■■■□□ 2.63
SSBP4-202ENST00000348495 CCDC96Q2M329 555 aa31.45■■■□□ 2.63
SSBP4-202ENST00000348495 KCTD1Q719H9 257 aa31.45■■■□□ 2.63
SSBP4-202ENST00000348495 C12orf42Q96LP6 360 aa31.45■■■□□ 2.63
SSBP4-202ENST00000348495 NUP88Q99567 741 aaPredicted RBP31.45■■■□□ 2.63
SSBP4-202ENST00000348495 C19orf81C9J6K1 198 aa31.44■■■□□ 2.62
SSBP4-202ENST00000348495 FMNL1O95466 1100 aaPredicted RBP31.44■■■□□ 2.62
SSBP4-202ENST00000348495 BMP3P12645 472 aa31.44■■■□□ 2.62
SSBP4-202ENST00000348495 CCDC82Q8N4S0 544 aa31.44■■■□□ 2.62
SSBP4-202ENST00000348495 DDX11Q96FC9 970 aa31.44■■■□□ 2.62
SSBP4-202ENST00000348495 SPZ1Q9BXG8 430 aa31.44■■■□□ 2.62
SSBP4-202ENST00000348495 GPCPD1Q9NPB8 672 aa31.44■■■□□ 2.62
SSBP4-202ENST00000348495 CYTH3O43739 400 aa31.44■■■□□ 2.62
SSBP4-202ENST00000348495 PPIL2Q13356 520 aa31.44■■■□□ 2.62
SSBP4-202ENST00000348495 RNF26Q9BY78 433 aaPredicted RBP31.44■■■□□ 2.62
SSBP4-202ENST00000348495 SH3D19Q5HYK7 790 aa31.43■■■□□ 2.62
SSBP4-202ENST00000348495 TTBK2Q6IQ55 1244 aa31.43■■■□□ 2.62
SSBP4-202ENST00000348495 OTUD5Q96G74 571 aa31.43■■■□□ 2.62
SSBP4-202ENST00000348495 CPVLQ9H3G5 476 aa31.43■■■□□ 2.62
SSBP4-202ENST00000348495 PTPRFP10586 1907 aa31.42■■■□□ 2.62
SSBP4-202ENST00000348495 SSRP1Q08945 709 aaKnown RBP31.42■■■□□ 2.62
SSBP4-202ENST00000348495 DGKZQ13574 1117 aa31.42■■■□□ 2.62
SSBP4-202ENST00000348495 OPTNQ96CV9 577 aa31.42■■■□□ 2.62
SSBP4-202ENST00000348495 SLC10A4Q96EP9 437 aa31.42■■■□□ 2.62
SSBP4-202ENST00000348495 SLC26A6Q9BXS9 759 aa31.42■■■□□ 2.62
SSBP4-202ENST00000348495 ORC3Q9UBD5 711 aaPredicted RBP31.42■■■□□ 2.62
SSBP4-202ENST00000348495 KCNH4Q9UQ05 1017 aa31.42■■■□□ 2.62
SSBP4-202ENST00000348495 IRF6O14896 467 aa31.41■■■□□ 2.62
SSBP4-202ENST00000348495 PRPF3O43395 683 aaKnown RBP31.41■■■□□ 2.62
SSBP4-202ENST00000348495 FAM83BQ5T0W9 1011 aa31.41■■■□□ 2.62
SSBP4-202ENST00000348495 RIOX1Q9H6W3 641 aa31.41■■■□□ 2.62
SSBP4-202ENST00000348495 CXCL11O14625 94 aa31.41■■■□□ 2.62
SSBP4-202ENST00000348495 WDR46O15213 610 aaKnown RBP31.41■■■□□ 2.62
SSBP4-202ENST00000348495 HMGCS2P54868 508 aa31.41■■■□□ 2.62
SSBP4-202ENST00000348495 BTNL9Q6UXG8 535 aa31.41■■■□□ 2.62
SSBP4-202ENST00000348495 TRIM22Q8IYM9 498 aa31.41■■■□□ 2.62
SSBP4-202ENST00000348495 UBA5Q9GZZ9 404 aa31.41■■■□□ 2.62
SSBP4-202ENST00000348495 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.41■■■□□ 2.62
SSBP4-202ENST00000348495 VCAM1P19320 739 aa31.4■■■□□ 2.62
SSBP4-202ENST00000348495 GJA5P36382 358 aa31.4■■■□□ 2.62
SSBP4-202ENST00000348495 V9GY48 417 aaPredicted RBP31.4■■■□□ 2.62
SSBP4-202ENST00000348495 FSTL1Q12841 308 aa31.39■■■□□ 2.62
SSBP4-202ENST00000348495 PLA2G6O60733 806 aa31.38■■■□□ 2.61
SSBP4-202ENST00000348495 BAZ2BQ9UIF8 2168 aaKnown RBP31.38■■■□□ 2.61
SSBP4-202ENST00000348495 TMEM232C9JQI7 657 aa31.38■■■□□ 2.61
SSBP4-202ENST00000348495 SLC16A2P36021 539 aa31.38■■■□□ 2.61
SSBP4-202ENST00000348495 PKN1Q16512 942 aa31.38■■■□□ 2.61
SSBP4-202ENST00000348495 A0A0G2JLL6 359 aaPredicted RBP31.37■■■□□ 2.61
SSBP4-202ENST00000348495 DEXIO95424 95 aa31.37■■■□□ 2.61
SSBP4-202ENST00000348495 PRRT2Q7Z6L0 340 aaPredicted RBP31.37■■■□□ 2.61
SSBP4-202ENST00000348495 FAM184AQ8NB25 1140 aa31.37■■■□□ 2.61
SSBP4-202ENST00000348495 LOC285556D6RIA3 1793 aa31.36■■■□□ 2.61
SSBP4-202ENST00000348495 HUNKP57058 714 aa31.36■■■□□ 2.61
SSBP4-202ENST00000348495 SAPCD2Q86UD0 394 aa31.36■■■□□ 2.61
SSBP4-202ENST00000348495 ADGRF4Q8IZF3 695 aa31.36■■■□□ 2.61
SSBP4-202ENST00000348495 MTMR8Q96EF0 704 aa31.36■■■□□ 2.61
SSBP4-202ENST00000348495 WNK4Q96J92 1243 aa31.36■■■□□ 2.61
SSBP4-202ENST00000348495 JMJD4Q9H9V9 463 aa31.36■■■□□ 2.61
SSBP4-202ENST00000348495 RBM27Q9P2N5 1060 aaKnown RBP31.36■■■□□ 2.61
SSBP4-202ENST00000348495 ISY1Q9ULR0 285 aaKnown RBP31.36■■■□□ 2.61
SSBP4-202ENST00000348495 KIF3AQ9Y496 699 aa31.36■■■□□ 2.61
SSBP4-202ENST00000348495 MYH6P13533 1939 aa31.36■■■□□ 2.61
SSBP4-202ENST00000348495 STAT2P52630 851 aa31.35■■■□□ 2.61
SSBP4-202ENST00000348495 TMOD4Q9NZQ9 345 aa31.35■■■□□ 2.61
SSBP4-202ENST00000348495 hCG_1642624A0A1W2PR95 340 aa31.35■■■□□ 2.61
SSBP4-202ENST00000348495 RPAP3Q9H6T3 665 aaPredicted RBP31.35■■■□□ 2.61
SSBP4-202ENST00000348495 FEM1BQ9UK73 627 aa31.35■■■□□ 2.61
SSBP4-202ENST00000348495 SYT1P21579 422 aa31.34■■■□□ 2.61
SSBP4-202ENST00000348495 AKAP17AQ02040 695 aaKnown RBP31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms