RNA–Protein interactions for RNA: ENST00000346855.7

UBE2E1-202, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3 BASIC

Gene UBE2E1, Length 1,398 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-202ENST00000346855 MAP3K14Q99558 947 aa21.37■■□□□ 1.01
UBE2E1-202ENST00000346855 NUP88Q99567 741 aaPredicted RBP21.37■■□□□ 1.01
UBE2E1-202ENST00000346855 LARP6Q9BRS8 491 aaKnown RBP21.37■■□□□ 1.01
UBE2E1-202ENST00000346855 RPAP3Q9H6T3 665 aaPredicted RBP21.37■■□□□ 1.01
UBE2E1-202ENST00000346855 MYH6P13533 1939 aa21.37■■□□□ 1.01
UBE2E1-202ENST00000346855 GOLGA8BA8MQT2 603 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 ZBTB43O43298 467 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 CALM1P0DP23 149 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 CALM2P0DP24 149 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 CALM3P0DP25 149 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 BMP3P12645 472 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 KIF23Q02241 960 aaPredicted RBP21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 ZNF543Q08ER8 600 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 SREBF2Q12772 1141 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 CCDC96Q2M329 555 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 SYNE3Q6ZMZ3 975 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 RAB11FIP4Q86YS3 637 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 NUP133Q8WUM0 1156 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 CHMP4CQ96CF2 233 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 PTPN18Q99952 460 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 TPCN1Q9ULQ1 816 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 BTBD19C9JJ37 291 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 CD2BP2O95400 341 aaKnown RBP21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 RXRAP19793 462 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 INHBEP58166 350 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 ASPRV1Q53RT3 343 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 KCTD1Q719H9 257 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 NOL8Q76FK4 1167 aaKnown RBP21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 ANKRD23Q86SG2 305 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 ZNF274Q96GC6 653 aaPredicted RBP21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 MAD2L2Q9UI95 211 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 HPS5Q9UPZ3 1129 aa21.36■■□□□ 1.01
UBE2E1-202ENST00000346855 FRMPD2Q68DX3 1309 aaPredicted RBP21.35■■□□□ 1.01
UBE2E1-202ENST00000346855 IGF2BP3O00425 579 aaKnown RBP eCLIP21.35■■□□□ 1.01
UBE2E1-202ENST00000346855 PARP1P09874 1014 aaKnown RBP21.35■■□□□ 1.01
UBE2E1-202ENST00000346855 PDIA3P30101 505 aaKnown RBP21.35■■□□□ 1.01
UBE2E1-202ENST00000346855 HOXA7P31268 230 aaPredicted RBP21.35■■□□□ 1.01
UBE2E1-202ENST00000346855 GPATCH4Q5T3I0 446 aaKnown RBP21.35■■□□□ 1.01
UBE2E1-202ENST00000346855 FAM43AQ8N2R8 423 aa21.35■■□□□ 1.01
UBE2E1-202ENST00000346855 CTCFLQ8NI51 663 aaPredicted RBP21.35■■□□□ 1.01
UBE2E1-202ENST00000346855 NAP1L2Q9ULW6 460 aaPredicted RBP21.35■■□□□ 1.01
UBE2E1-202ENST00000346855 SLC45A1Q9Y2W3 748 aa21.35■■□□□ 1.01
UBE2E1-202ENST00000346855 BAZ2BQ9UIF8 2168 aaKnown RBP21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 PALM3A6NDB9 673 aaPredicted RBP21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 GOLGA8AA7E2F4 631 aa21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 USP17L15C9J2P7 530 aa21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 USP17L13C9JLJ4 530 aa21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 USP17L11C9JVI0 530 aa21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 USP17L18D6R9N7 530 aa21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 USP17L22D6RA61 530 aa21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 USP17L17D6RBQ6 530 aa21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 USP17L19D6RCP7 530 aa21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 USP17L20D6RJB6 530 aa21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 MAP2K2P36507 400 aa21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 TM4SF4P48230 202 aa21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 METAP2P50579 478 aaKnown RBP eCLIP21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 USP17L24Q0WX57 530 aa21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 CATSPERGQ6ZRH7 1159 aa21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 CCDC144CPQ8IYA2 1237 aa21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 TANGO6Q9C0B7 1094 aa21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 ZCCHC17Q9NP64 241 aaKnown RBP21.34■■□□□ 1.01
UBE2E1-202ENST00000346855 LARGE1O95461 756 aa21.33■■□□□ 1
UBE2E1-202ENST00000346855 GOLGA8HP0CJ92 632 aa21.33■■□□□ 1
UBE2E1-202ENST00000346855 PABPC4Q13310 644 aaKnown RBP eCLIP21.33■■□□□ 12e-7■□□□□ 9.2
UBE2E1-202ENST00000346855 RTN1Q16799 776 aa21.33■■□□□ 1
UBE2E1-202ENST00000346855 IFNL1Q8IU54 200 aa21.33■■□□□ 1
UBE2E1-202ENST00000346855 REM2Q8IYK8 340 aaPredicted RBP21.33■■□□□ 1
UBE2E1-202ENST00000346855 STAG2Q8N3U4 1231 aa21.33■■□□□ 1
UBE2E1-202ENST00000346855 FANCBQ8NB91 859 aa21.33■■□□□ 1
UBE2E1-202ENST00000346855 GPCPD1Q9NPB8 672 aa21.33■■□□□ 1
UBE2E1-202ENST00000346855 FEM1BQ9UK73 627 aa21.33■■□□□ 1
UBE2E1-202ENST00000346855 ISY1Q9ULR0 285 aaKnown RBP21.33■■□□□ 1
UBE2E1-202ENST00000346855 LIMCH1Q9UPQ0 1083 aa21.33■■□□□ 1
UBE2E1-202ENST00000346855 TMEM232C9JQI7 657 aa21.32■■□□□ 1
UBE2E1-202ENST00000346855 PDHXO00330 501 aa21.32■■□□□ 1
UBE2E1-202ENST00000346855 PLA2G6O60733 806 aa21.32■■□□□ 1
UBE2E1-202ENST00000346855 KIF5BP33176 963 aa21.32■■□□□ 1
UBE2E1-202ENST00000346855 MCM2P49736 904 aa21.32■■□□□ 1
UBE2E1-202ENST00000346855 STAT2P52630 851 aa21.32■■□□□ 1
UBE2E1-202ENST00000346855 ME3Q16798 604 aa21.32■■□□□ 1
UBE2E1-202ENST00000346855 TTBK2Q6IQ55 1244 aa21.32■■□□□ 1
UBE2E1-202ENST00000346855 BTNL9Q6UXG8 535 aa21.32■■□□□ 1
UBE2E1-202ENST00000346855 FAM217BQ9NTX9 383 aaPredicted RBP21.32■■□□□ 1
UBE2E1-202ENST00000346855 FBXO28Q9NVF7 368 aa21.32■■□□□ 1
UBE2E1-202ENST00000346855 RBM28Q9NW13 759 aaKnown RBP21.32■■□□□ 1
UBE2E1-202ENST00000346855 PFKFB2O60825 505 aa21.31■■□□□ 1
UBE2E1-202ENST00000346855 FLOT1O75955 427 aa21.31■■□□□ 1
UBE2E1-202ENST00000346855 CDC27P30260 824 aa21.31■■□□□ 1
UBE2E1-202ENST00000346855 FAM160B2Q86V87 743 aa21.31■■□□□ 1
UBE2E1-202ENST00000346855 ASCC2Q9H1I8 757 aaPredicted RBP21.31■■□□□ 1
UBE2E1-202ENST00000346855 PNMA3Q9UL41 463 aa21.31■■□□□ 1
UBE2E1-202ENST00000346855 MYPNQ86TC9 1320 aa21.31■■□□□ 1
UBE2E1-202ENST00000346855 KLRF2D3W0D1 207 aa21.3■■□□□ 1
UBE2E1-202ENST00000346855 OSBPP22059 807 aa21.3■■□□□ 1
UBE2E1-202ENST00000346855 CCT2P78371 535 aaKnown RBP21.3■■□□□ 1
UBE2E1-202ENST00000346855 IRX3P78415 501 aaPredicted RBP21.3■■□□□ 1
UBE2E1-202ENST00000346855 STK3Q13188 491 aa21.3■■□□□ 1
UBE2E1-202ENST00000346855 PPP2R5BQ15173 497 aa21.3■■□□□ 1
UBE2E1-202ENST00000346855 TMTC3Q6ZXV5 915 aa21.3■■□□□ 1
UBE2E1-202ENST00000346855 CHURC1Q8WUH1 139 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms