RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 BLZF1Q9H2G9 400 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 VPS18Q9P253 973 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 RPAP1Q9BWH6 1393 aaPredicted RBP12.12□□□□□ -0.47
CLCN6-202ENST00000346436 NEXMIFQ5QGS0 1516 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 AKR1B15C9JRZ8 316 aaPredicted RBP12.12□□□□□ -0.47
CLCN6-202ENST00000346436 NDC80O14777 642 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 YWHAEP62258 255 aaKnown RBP12.12□□□□□ -0.47
CLCN6-202ENST00000346436 RESTQ13127 1097 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 CTR9Q6PD62 1173 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.12□□□□□ -0.47
CLCN6-202ENST00000346436 CTAGE1Q96RT6 745 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 NRBP2Q9NSY0 501 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 MROH2AA6NES4 1674 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 OVOS2A0A0G2JMS6 1433 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 OVOS2A0A0J9YW53 1432 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 OVOS2Q6IE36 1432 aa12.12□□□□□ -0.47
CLCN6-202ENST00000346436 ZNF804BA4D1E1 1349 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 ARL1P40616 181 aaPredicted RBP12.11□□□□□ -0.47
CLCN6-202ENST00000346436 INO80Q9ULG1 1556 aaPredicted RBP12.11□□□□□ -0.47
CLCN6-202ENST00000346436 ICA1Q05084 483 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 SLC16A10Q8TF71 515 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 RIOK1Q9BRS2 568 aaKnown RBP12.11□□□□□ -0.47
CLCN6-202ENST00000346436 FANCLQ9NW38 375 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 ZC3H13Q5T200 1668 aaKnown RBP12.11□□□□□ -0.47
CLCN6-202ENST00000346436 BICDL2A1A5D9 508 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 TMCO5BA8MYB1 307 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 GCOM1H8Y6P7 765 aaPredicted RBP12.11□□□□□ -0.47
CLCN6-202ENST00000346436 MYZAPP0CAP1 466 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 UBE4AQ14139 1066 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 POSTNQ15063 836 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 KIAA1841Q6NSI8 718 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 OSBP2Q969R2 916 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 TIGD1Q96MW7 591 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 CARMIL3Q8ND23 1372 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 USP17L3A6NCW0 530 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 USP17L4A6NCW7 530 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 NAA30Q147X3 362 aaPredicted RBP12.11□□□□□ -0.47
CLCN6-202ENST00000346436 USP17L1Q7RTZ2 530 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 NAA15Q9BXJ9 866 aaKnown RBP12.11□□□□□ -0.47
CLCN6-202ENST00000346436 SWAP70Q9UH65 585 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 AXIN2Q9Y2T1 843 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 BTBD18B2RXH4 712 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 CUTAO60888 179 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 ZMYM1Q5SVZ6 1142 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 MFSD14CQ5VZR4 134 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 ZBTB38Q8NAP3 1195 aaPredicted RBP12.11□□□□□ -0.47
CLCN6-202ENST00000346436 TAF6LQ9Y6J9 622 aa12.11□□□□□ -0.47
CLCN6-202ENST00000346436 CHMP2AO43633 222 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 AKR1B10O60218 316 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 RPS6KA4O75676 772 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 PCCAP05165 728 aaPredicted RBP12.1□□□□□ -0.47
CLCN6-202ENST00000346436 ABCB5Q2M3G0 1257 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 MAP9Q49MG5 647 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 FAM182BQ5T319 152 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 PALLDQ8WX93 1383 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 ADGRB1O14514 1584 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 KIAA0754O94854 1291 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 ZSCAN20P17040 1043 aaPredicted RBP12.1□□□□□ -0.47
CLCN6-202ENST00000346436 RILPL1Q5EBL4 403 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 GCNAQ96QF7 691 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 UIMC1Q96RL1 719 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 IWS1Q96ST2 819 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 PUS7LQ9H0K6 701 aaKnown RBP12.1□□□□□ -0.47
CLCN6-202ENST00000346436 DEXIO95424 95 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 SCNN1DP51172 638 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 KRT25Q7Z3Z0 450 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 METTL13Q8N6R0 699 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 KIFAP3Q92845 792 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 SRRTQ9BXP5 876 aaKnown RBP12.1□□□□□ -0.47
CLCN6-202ENST00000346436 ABCA9Q8IUA7 1624 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 RAD17O75943 681 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 UTP14CQ5TAP6 766 aaKnown RBP12.1□□□□□ -0.47
CLCN6-202ENST00000346436 CSRNP1Q96S65 589 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 GREM2Q9H772 168 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 BCCIPQ9P287 314 aaKnown RBP eCLIP12.1□□□□□ -0.47
CLCN6-202ENST00000346436 IMPACTQ9P2X3 320 aa12.1□□□□□ -0.47
CLCN6-202ENST00000346436 TFDP1Q14186 410 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 SDR42E1Q8WUS8 393 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 MRFAP1L1Q96HT8 127 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 GOLGA6L10A0A0M3HER8 536 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 POLR2MP0CAP2 368 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 KRT26Q7Z3Y9 468 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 FBXO18Q8NFZ0 1043 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 DEPTORQ8TB45 409 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 RAET1EQ8TD07 263 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 MICAL1Q8TDZ2 1067 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 NCOA3Q9Y6Q9 1424 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 TYW5A2RUC4 315 aaKnown RBP12.09□□□□□ -0.47
CLCN6-202ENST00000346436 USP17L8P0C7I0 530 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 GRAMD1CQ8IYS0 662 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 GSDMBQ8TAX9 411 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 DHX36Q9H2U1 1008 aaKnown RBP12.09□□□□□ -0.47
CLCN6-202ENST00000346436 TAB2Q9NYJ8 693 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 TESPA1A2RU30 521 aaPredicted RBP12.09□□□□□ -0.47
CLCN6-202ENST00000346436 MYCP01106 439 aaPredicted RBP12.09□□□□□ -0.47
CLCN6-202ENST00000346436 PHKA1P46020 1223 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 TXNRD1Q16881 649 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 GOLPH3LQ9H4A5 285 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 RSPH14Q9UHP6 348 aa12.09□□□□□ -0.47
CLCN6-202ENST00000346436 LMTK2Q8IWU2 1503 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms