RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 MTF1Q14872 753 aa17.36■□□□□ 0.37
PTPRU-201ENST00000345512 ABCB6Q9NP58 842 aa17.36■□□□□ 0.37
PTPRU-201ENST00000345512 SAP30BPQ9UHR5 308 aaKnown RBP17.36■□□□□ 0.37
PTPRU-201ENST00000345512 WDR19Q8NEZ3 1342 aa17.36■□□□□ 0.37
PTPRU-201ENST00000345512 PPP1R2P41236 205 aa17.36■□□□□ 0.37
PTPRU-201ENST00000345512 INF2Q27J81 1249 aa17.36■□□□□ 0.37
PTPRU-201ENST00000345512 RPGRIP1Q96KN7 1286 aa17.36■□□□□ 0.37
PTPRU-201ENST00000345512 ADAM21Q9UKJ8 722 aa17.36■□□□□ 0.37
PTPRU-201ENST00000345512 MFAP3LO75121 409 aa17.36■□□□□ 0.37
PTPRU-201ENST00000345512 FAM71BQ8TC56 605 aa17.36■□□□□ 0.37
PTPRU-201ENST00000345512 MROH7-TTC4A0A0A0MT08 1334 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 NDUFAB1O14561 156 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 ACTN2P35609 894 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 IFI16Q16666 785 aaKnown RBP17.35■□□□□ 0.37
PTPRU-201ENST00000345512 PLCD3Q8N3E9 789 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 EXOC4Q96A65 974 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 PLEKHA4Q9H4M7 779 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 PARP1P09874 1014 aaKnown RBP17.35■□□□□ 0.37
PTPRU-201ENST00000345512 HSPA2P54652 639 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 CHRNDQ07001 517 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 RAPGEF1Q13905 1077 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 SLF2Q8IX21 1173 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 DYDC1Q8WWB3 177 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 FAM204AQ9H8W3 233 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 MED4Q9NPJ6 270 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 TUBE1Q9UJT0 475 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 PRDM4Q9UKN5 801 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 HLFQ16534 295 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 NCAPH2Q6IBW4 605 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 RPGRQ92834 1020 aaKnown RBP17.35■□□□□ 0.37
PTPRU-201ENST00000345512 CYP2D7A0A087X1C5 515 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 RRAGAQ7L523 313 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 IPO4Q8TEX9 1081 aaKnown RBP17.35■□□□□ 0.37
PTPRU-201ENST00000345512 SELENOOQ9BVL4 669 aa17.35■□□□□ 0.37
PTPRU-201ENST00000345512 GUCY1A2P33402 732 aa17.34■□□□□ 0.37
PTPRU-201ENST00000345512 NONOQ15233 471 aaKnown RBP eCLIP17.34■□□□□ 0.37
PTPRU-201ENST00000345512 KRT31Q15323 416 aa17.34■□□□□ 0.37
PTPRU-201ENST00000345512 RASGRP4Q8TDF6 673 aa17.34■□□□□ 0.37
PTPRU-201ENST00000345512 CCDC87Q9NVE4 849 aa17.34■□□□□ 0.37
PTPRU-201ENST00000345512 MYO1AQ9UBC5 1043 aa17.34■□□□□ 0.37
PTPRU-201ENST00000345512 SOS2Q07890 1332 aaPredicted RBP17.34■□□□□ 0.37
PTPRU-201ENST00000345512 GIMAP7Q8NHV1 300 aa17.34■□□□□ 0.37
PTPRU-201ENST00000345512 PPARDQ03181 441 aa17.34■□□□□ 0.37
PTPRU-201ENST00000345512 B4DLN1 442 aa17.33■□□□□ 0.37
PTPRU-201ENST00000345512 NOX5Q96PH1 765 aa17.33■□□□□ 0.37
PTPRU-201ENST00000345512 LRWD1Q9UFC0 647 aa17.33■□□□□ 0.37
PTPRU-201ENST00000345512 HPS5Q9UPZ3 1129 aa17.33■□□□□ 0.37
PTPRU-201ENST00000345512 ADGRG1Q9Y653 693 aa17.33■□□□□ 0.37
PTPRU-201ENST00000345512 DYNLL1P63167 89 aaKnown RBP17.33■□□□□ 0.37
PTPRU-201ENST00000345512 FMR1Q06787 632 aaKnown RBP eCLIP17.33■□□□□ 0.37
PTPRU-201ENST00000345512 PICALMQ13492 652 aa17.33■□□□□ 0.37
PTPRU-201ENST00000345512 CASP8Q14790 479 aa17.33■□□□□ 0.37
PTPRU-201ENST00000345512 NLRC4Q9NPP4 1024 aa17.33■□□□□ 0.37
PTPRU-201ENST00000345512 MRFAP1Q9Y605 127 aa17.33■□□□□ 0.37
PTPRU-201ENST00000345512 CCDC24Q8N4L8 307 aa17.33■□□□□ 0.36
PTPRU-201ENST00000345512 TUBGCP2Q9BSJ2 902 aa17.33■□□□□ 0.36
PTPRU-201ENST00000345512 CCDC84Q86UT8 332 aaPredicted RBP17.33■□□□□ 0.36
PTPRU-201ENST00000345512 PNMA1Q8ND90 353 aa17.33■□□□□ 0.36
PTPRU-201ENST00000345512 L2HGDHQ9H9P8 463 aa17.33■□□□□ 0.36
PTPRU-201ENST00000345512 SENP2Q9HC62 589 aa17.33■□□□□ 0.36
PTPRU-201ENST00000345512 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.33■□□□□ 0.36
PTPRU-201ENST00000345512 NPHP4O75161 1426 aaPredicted RBP17.32■□□□□ 0.36
PTPRU-201ENST00000345512 TNNC1P63316 161 aa17.32■□□□□ 0.36
PTPRU-201ENST00000345512 ANKRD13CQ8N6S4 541 aa17.32■□□□□ 0.36
PTPRU-201ENST00000345512 ZNF579Q8NAF0 562 aaKnown RBP17.32■□□□□ 0.36
PTPRU-201ENST00000345512 TRIM58Q8NG06 486 aa17.32■□□□□ 0.36
PTPRU-201ENST00000345512 WDR17Q8IZU2 1322 aa17.32■□□□□ 0.36
PTPRU-201ENST00000345512 STK36Q9NRP7 1315 aa17.32■□□□□ 0.36
PTPRU-201ENST00000345512 NDUFA10O95299 355 aa17.32■□□□□ 0.36
PTPRU-201ENST00000345512 PLEKHA8P1O95397 391 aa17.32■□□□□ 0.36
PTPRU-201ENST00000345512 LONP1P36776 959 aaKnown RBP17.32■□□□□ 0.36
PTPRU-201ENST00000345512 SGMS1Q86VZ5 419 aa17.32■□□□□ 0.36
PTPRU-201ENST00000345512 PPM1EQ8WY54 764 aa17.32■□□□□ 0.36
PTPRU-201ENST00000345512 HPDP32754 393 aaPredicted RBP17.32■□□□□ 0.36
PTPRU-201ENST00000345512 PPFIA1Q13136 1202 aa17.32■□□□□ 0.36
PTPRU-201ENST00000345512 ISCA1Q9BUE6 129 aa17.32■□□□□ 0.36
PTPRU-201ENST00000345512 DDAH1O94760 285 aa17.31■□□□□ 0.36
PTPRU-201ENST00000345512 KRT25Q7Z3Z0 450 aa17.31■□□□□ 0.36
PTPRU-201ENST00000345512 ANKRD2Q9GZV1 360 aa17.31■□□□□ 0.36
PTPRU-201ENST00000345512 RRP15Q9Y3B9 282 aaKnown RBP17.31■□□□□ 0.36
PTPRU-201ENST00000345512 F8W031 263 aaPredicted RBP17.31■□□□□ 0.36
PTPRU-201ENST00000345512 SLC9C1Q4G0N8 1177 aa17.31■□□□□ 0.36
PTPRU-201ENST00000345512 ZNF658Q5TYW1 1059 aaPredicted RBP17.31■□□□□ 0.36
PTPRU-201ENST00000345512 TPTE2Q6XPS3 522 aa17.31■□□□□ 0.36
PTPRU-201ENST00000345512 RWDD2AQ9UIY3 292 aa17.31■□□□□ 0.36
PTPRU-201ENST00000345512 TBCAO75347 108 aaKnown RBP17.31■□□□□ 0.36
PTPRU-201ENST00000345512 PARP3Q9Y6F1 533 aa17.31■□□□□ 0.36
PTPRU-201ENST00000345512 RNF40O75150 1001 aa17.31■□□□□ 0.36
PTPRU-201ENST00000345512 IFT20Q8IY31 132 aa17.31■□□□□ 0.36
PTPRU-201ENST00000345512 GDAQ9Y2T3 454 aa17.31■□□□□ 0.36
PTPRU-201ENST00000345512 AGLP35573 1532 aa17.3■□□□□ 0.36
PTPRU-201ENST00000345512 PRPF3O43395 683 aaKnown RBP17.3■□□□□ 0.36
PTPRU-201ENST00000345512 TECP42680 631 aa17.3■□□□□ 0.36
PTPRU-201ENST00000345512 SNX29Q8TEQ0 813 aa17.3■□□□□ 0.36
PTPRU-201ENST00000345512 UIMC1Q96RL1 719 aa17.3■□□□□ 0.36
PTPRU-201ENST00000345512 TMEM94Q12767 1356 aa17.3■□□□□ 0.36
PTPRU-201ENST00000345512 TRAPPC10P48553 1259 aa17.3■□□□□ 0.36
PTPRU-201ENST00000345512 USP49Q70CQ1 688 aa17.3■□□□□ 0.36
PTPRU-201ENST00000345512 ARFGAP2Q8N6H7 521 aa17.3■□□□□ 0.36
PTPRU-201ENST00000345512 CARD10Q9BWT7 1032 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms